BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492744
Length=2165
Score E
Sequences producing significant alignments: (Bits) Value
AT4G21400.1 | Symbols: CRK28 | cysteine-rich RLK (RECEPTOR-like... 1275 0.0
AT4G21410.1 | Symbols: CRK29 | cysteine-rich RLK (RECEPTOR-like... 828 0.0
> AT4G21400.1 | Symbols: CRK28 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 28 | chr4:11399131-11401709 REVERSE LENGTH=2223
Length=2223
Score = 1275 bits (690), Expect = 0.0
Identities = 792/841 (94%), Gaps = 7/841 (1%)
Strand=Plus/Plus
Query 1206 GAAAGAATCCTTGTCTATGAGTTCATCAAGAATGCTAGTCTTGACAATTTCATCTTCGGT 1265
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1285 GAACGAATCCTTGTCTATGAGTTCATCAAGAACGCTAGTCTTGACAATTTCATCTTCGGT 1344
Query 1266 AATAT-TTTTCTGCCGTTTGCTCCATATGATGATCCTACCGTTCTG--TTTTCCACTCAG 1322
||| | ||||| ||||||| |||||||||||||||||||||||||| ||||| ||| |
Sbjct 1345 AAT-TGTTTTCCGCCGTTTTCTCCATATGATGATCCTACCGTTCTGTTTTTTCTGCTCTG 1403
Query 1323 TGTTGATCTTTGTGCCGTTGCAGATCTTGAGAAGCGTCAACTTTTGGATTGGGGAGTGCG 1382
||||||||||| || ||| |||||||| | |||||||||||||||||||||||||||||
Sbjct 1404 TGTTGATCTTTACGCTGTTACAGATCTTAAAAAGCGTCAACTTTTGGATTGGGGAGTGCG 1463
Query 1383 ATACAAAATGATAGGCGGAGTTGCTAGAGGACTACTTTATCTTCACGAAGACTCTCGTTA 1442
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1464 ATACAAAATGATAGGTGGAGTTGCTAGAGGACTTCTTTATCTTCATGAAGACTCTCGTTA 1523
Query 1443 CCGAATTATTCACCGTGATCTTAAAGCTAGCAACATTCTTTTGGACCAAGAAATGAACCC 1502
||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1524 CCGGATAATTCACCGTGATCTTAAAGCTAGCAACATTCTTTTGGACCAAGAAATGAATCC 1583
Query 1503 AAAAATCGCAGATTTTGGATTAGCTAAACTCTTTGACACAGACCAAACTTCGACACATCG 1562
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1584 GAAAATCGCAGATTTTGGATTAGCTAAACTCTATGACACAGACCAAACTTCGACACATCG 1643
Query 1563 ATTCACAAGCAAAATTGCAGGAACTTACGGGTATATGGCTCCAGAATACGCTATTTACGG 1622
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 ATTTACAAGCAAAATTGCAGGAACTTACGGGTATATGGCTCCAGAATACGCTATTTACGG 1703
Query 1623 TCAATTCTCGGTGAAAACAGACGTTTTCAGCTTCGGTGTATTAGTGATAGAGATCATTAC 1682
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1704 TCAATTCTCGGTGAAAACAGACGTTTTCAGCTTCGGTGTATTAGTCATAGAGATCATTAC 1763
Query 1683 AGGTAAGGGAAACAACAATGGTCGATCAAATAATGACGAAGATGCAGAAAATCTCCTTAG 1742
|||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1764 GGGTAAGGGAAACAATAATGGTCGATCAAATGATGACGAAGAGGCAGAAAATCTCCTTAG 1823
Query 1743 TTGGGTATGGAGATGTTGGAGAGAAGACATTATACTAAGCGTTATTGATCCGAGTTTAAC 1802
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1824 TTGGGTGTGGAGATGTTGGAGAGAAGACATTATACTAAGCGTTATTGATCCGAGTCTAAC 1883
Query 1803 CACGGGATCAAGAAGCGAGATCTTGAGGTGCATACACATTGGTCTTTTATGTGTTCAAGA 1862
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1884 CACGGGATCAAGAAGCGAGATCTTGAGATGCATACACATTGGTCTTTTATGTGTTCAAGA 1943
Query 1863 GAGTGCAGCAAGTAGACCAACAATGGATTCGGTTGCTCTAATGCTCAATAGCTATTCCTA 1922
||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1944 AAGTCCAGCGAGTAGACCAACTATGGATTCGGTTGCTCTAATGCTCAATAGCTATTCCTA 2003
Query 1923 TACTCTTCCAACGCCTTCGAGGCCTGCCTTTGTGTCAGAGAGTGTCATGCCTTCGAT--- 1979
|||||| ||||||||||| ||||| ||||||| || |||||||||||||||||||||
Sbjct 2004 TACTCTCCCAACGCCTTCAAGGCCCGCCTTTGCGTTAGAGAGTGTCATGCCTTCGATGAA 2063
Query 1980 TGTTTCTTCTTCGACAGAACCGTTACTAATGTCGTTGAATGATGTCACTGTTTCTGAGTT 2039
|||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 2064 TGTTTCTTCTTCCACAGAACCGTTATTAATGTCCTTGAATGATGTCACTGTTTCTGAGTT 2123
Query 2040 A 2040
|
Sbjct 2124 A 2124
Score = 1000 bits (541), Expect = 0.0
Identities = 584/605 (97%), Gaps = 1/605 (0%)
Strand=Plus/Plus
Query 1 ATGGAACATGTCAGAGTTATCTTTTTCTTCTTTGCTTGTGTCCTAACGTTTGTACCATTT 60
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1 ATGGAACATGTCAGAGTTATCTTTTTCTTCTTTGCTTGTGTCCTAAAGATTGTACCATTT 60
Query 61 ATCTGCTCAGCACAGACGGATAAATATGAGTTTCCTCCAAGTTTCAACTGTGTAGCTAGT 120
||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 61 ATCTGCTTAGCACAGAAGGATAAATATGAGTTTCCTCCAGGTTTCAACTGTGTAGCTAGT 120
Query 121 GGAGGCAATTTCACGGCCAACAGCACTTTCGCCGATAATCTCAACGGCCTTGTCTCCTCT 180
|||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||
Sbjct 121 GGAGGCAATTTCACGGCCAACAGCTCTTTCGCTGGTAATCTCAACGGCCTTGTCTCCTCT 180
Query 181 CTTTCTTCACTCACATCCAAACCTTATGGCTTCTACAACCTCTCTTCTGGAGATTCATCT 240
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTCTCGTCACTCACATCCAAACCTTATGGCTTCTACAACCTCTCTTCTGGAGATTCATCT 240
Query 241 GGAGAAAGAGCTTATGCAATTGCTCTGTGTAGAAGAGAAGTAAAAAGAGATGATTGTCTC 300
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 241 GGAGAAAGAGCTTATGCAATTGGTCTTTGTAGAAGAGAAGTAAAAAGAGATGATTGTCTC 300
Query 301 AGCTGCATTCAGATAGCTGCAAGAAACCTTATCGAGCAGTGTCCGCGGACAAAACAAGCT 360
||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||
Sbjct 301 AGCTGCATTCAGATAGCTGCAAGAAACCTCATCGAGCAGTGTCCACTGACAAATCAAGCT 360
Query 361 GTTGTATGGTACACGCACTGTATGTTTCGTTACTCGAACATGATAATCTATGGAAGAAAA 420
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTTGTGTGGTACACACACTGTATGTTTCGTTACTCGAACATGATAATCTATGGAAGAAAA 420
Query 421 GAGACGACCCCAACTCTGTCTTTTCAAGCCGGTAAAAATATATCAGCAAACAGAGATGAG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GAGACGACCCCAACTCTGTCTTTTCAAGCCGGTAAAAATATATCAGCAAACAGAGATGAG 480
Query 481 TTTGATCGTCTACAGATAGAACTATTGGACAGACTCAAAGGGATTGCTGCAGCTGGTGGG 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TTTGATCGTCTGCAGATAGAACTATTGGACAGACTCAAAGGGATTGCTGCAGCTGGTGGG 540
Query 541 CCAA-TAGAAAATACGCTCAAGGGAGCGGTTCGGGTGTGGCGGGGTACCCGCAATTCTAC 599
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 541 CCAAATAGAAAATACGCTCAAGGGAGCGGTTCGGGTGTGGCAGGGTACCCGCAATTCTAC 600
Query 600 GGAAG 604
|||||
Sbjct 601 GGAAG 605
Score = 414 bits (224), Expect = 1e-114
Identities = 252/266 (95%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 604 GATTGTAATGACTGTCTAGTCTTTGGCTTTGAAAAGATCCCACGTTGTTGTGATGGCCAG 663
|||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||
Sbjct 637 GATTGTAATGACTGTCTAGTCTTTGGTTTTGAAAAGATCCCAGGTTGTTGTGCTGGTCAG 696
Query 664 GTTGGTCTTAGGTGGTTTTTTCCTAGTTGTAGCTTCAGATTTGAGACGTGGCGATTCTAT 723
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 697 GTTGGTCTTAGGTGGTTTTTTCCTAGTTGTAGCTACAGATTTGAGACCTGGCGATTCTAC 756
Query 724 GAGTTCGATTCCGATCTAGAGCCTGATCCACCTGCTATTCAGCCTGCTGACTCACCAACA 783
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 757 GAGTTCGATGCCGATCTAGAGCCTGATCCACCTGCTATTCAGCCTGCTGACTCCCCAACA 816
Query 784 TCAGCTGCAAGAACTGAGAGAACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATCGCG 843
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 817 TCAGCTGCAAGAACTGAGAGAACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTGTTGCG 876
Query 844 ATAGTCGTCCCGATAGTTCTTGTTGC 869
|||||| |||| |||||| |||||||
Sbjct 877 ATAGTCATCCCAATAGTTTTTGTTGC 902
Score = 394 bits (213), Expect = 2e-108
Identities = 225/231 (97%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 976 GATGAGTTCTCAGATTCGTTGCTAGTTGACTTTGAAACTCTAAAGGAAGCAACAGATAAC 1035
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 1021 GATGAGTTCTCAGATTCGTTGGTAGTTGACTTTGAAACTCTAAAGGCAGCAACAGATAAC 1080
Query 1036 TTTTCACCAGAAAACGAACTTGGACGTGGTGGCTTTGGCTCAGTTTATAAGGGTGTGTTC 1095
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1081 TTTTCACCAGAAAATGAACTTGGACGTGGTGGGTTTGGCTCAGTTTATAAGGGTGTGTTC 1140
Query 1096 TCGGGTGGGCAAGAAATCGCGGTGAAAAGATTATCGTGTACTTCAGGACAAGGAGACATT 1155
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1141 TCGGGTGGGCAAGAAATCGCGGTGAAAAGATTATCGTGTACTTCAGGACAAGGAGACAGT 1200
Query 1156 GAATTCAAGAACGAAATTTTACTACTTGCAAAGCTTCAACATAGGAACTTG 1206
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1201 GAATTCAAGAACGAAATTTTACTTCTTGCAAAGCTTCAACATAGGAACTTG 1251
Score = 150 bits (81), Expect = 5e-35
Identities = 98/106 (92%), Gaps = 2/106 (2%)
Strand=Plus/Plus
Query 2062 TGA-TTATCTCCTCGTTAGAAAGCTTAATCTGCATAT-GTTTTAGTTTCTTCACTGATGG 2119
||| ||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 2118 TGAGTTATCTCCTCGTTAGGAAGCTTAATCTGCATATCTTTTTAGTTTCTTCAATGATGG 2177
Query 2120 GTTTTGTTTGTGTGATTTTTTAGACAGCTTGTCTTCATCTAGTTTT 2165
|||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 2178 ATTTTGTTTGTGTGATTTTTTAGACAGCTTGGCTTCATCTAGCTTT 2223
> AT4G21410.1 | Symbols: CRK29 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 29 | chr4:11402314-11405056 REVERSE LENGTH=2220
Length=2220
Score = 828 bits (448), Expect = 0.0
Identities = 613/694 (88%), Gaps = 5/694 (1%)
Strand=Plus/Plus
Query 1350 TGAGAAGCGTCAACTTTTGGATTGGGGAGTGCGATACAAAATGATAGGCGGAGTTGCTAG 1409
|||||||||||||||||||||||||| |||||| ||||||||||| || ||| |||||||
Sbjct 1366 TGAGAAGCGTCAACTTTTGGATTGGGTAGTGCGGTACAAAATGATCGGAGGAATTGCTAG 1425
Query 1410 AGGACTACTTTATCTTCACGAAGACTCTCGTTACCGAATTATTCACCGTGATCTTAAAGC 1469
|||||| ||||||||||| ||||||||||||| ||| || ||||| ||||||||||||||
Sbjct 1426 AGGACTCCTTTATCTTCATGAAGACTCTCGTTTCCGGATAATTCATCGTGATCTTAAAGC 1485
Query 1470 TAGCAACATTCTTTTGGACCAAGAAATGAACCCAAAAATCGCAGATTTTGGATTAGCTAA 1529
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1486 TAGCAACATTCTTTTGGACCAAGAAATGAATCCGAAAATCGCAGATTTTGGATTAGCTAA 1545
Query 1530 ACTCTTTGACACAGACCAAACT-TCGACACATCGATTCACAAGCAAAATTGCAGGAACTT 1588
|||||||||| ||| |||||| | |||||||||||||||||||| |||||||||||||
Sbjct 1546 ACTCTTTGACTCAGGCCAAACCAT-GACACATCGATTCACAAGCAGGATTGCAGGAACTT 1604
Query 1589 ACGGGTATATGGCTCCAGAATACGCTATTTACGGTCAATTCTCGGTGAAAACAGACGTTT 1648
|||| ||||||||||| |||||||| || | || |||||||| ||||||||||| ||||
Sbjct 1605 ACGGATATATGGCTCCGGAATACGCAATGCATGGACAATTCTCTGTGAAAACAGATGTTT 1664
Query 1649 TCAGCTTCGGTGTATTAGTGATAGAGATCATTACAGGTAAGGGAAACAACAATGGTCGAT 1708
||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||
Sbjct 1665 TCAGCTTCGGTGTATTAGTCATTGAGATCATTACAGGTAAAAGAAACAACAATGGTGGAT 1724
Query 1709 CAAATAATGACGAAGATGCAGAAAATCTCCTTAGTTGGGTATGGAGATGTTGGAGAGAAG 1768
| ||| |||||||||||||||| |||| ||||||||||| |||||| | ||||||||||
Sbjct 1725 CGAATGGTGACGAAGATGCAGAAGATCTTCTTAGTTGGGTGTGGAGAAGCTGGAGAGAAG 1784
Query 1769 ACATTATACTAAGCGTTATTGATCCGAGTTTAACCACGGGATCAAGAAGCGAGATCTTGA 1828
||| |||||||||||| || ||||||||||||||| | |||||||||| ||||||||||
Sbjct 1785 ACACTATACTAAGCGTGATCGATCCGAGTTTAACCGCAGGATCAAGAAATGAGATCTTGA 1844
Query 1829 GGTGCATACACATTGGTCTTTTATGTGTTCAAGAGAGTGCAGCAAGTAGACCAACAATGG 1888
| |||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||
Sbjct 1845 GATGCATACACATTGGTCTTTTATGTGTGCAAGAAAGTGCAGCGACTAGACCAACAATGG 1904
Query 1889 ATTCGGTTGCTCTAATGCTCAATAGCTATTCCTATACTCTTCCAACGCCTTCGAGGCCTG 1948
| ||||| |||| ||||||||||||||||| | ||| || || ||||||| ||||||||
Sbjct 1905 CTACGGTTTCTCTCATGCTCAATAGCTATTCTTTTACCCTCCCGACGCCTTTGAGGCCTG 1964
Query 1949 CCTTTGTGTCAGAGAGTGTC---ATGCCTTCGATTGTTTCTTCTTCGACAGAACCGTTAC 2005
| ||||||| ||||||||| || ||||| | |||||||||||| || ||| |||||
Sbjct 1965 CGTTTGTGTTGGAGAGTGTCGTCATACCTTCAAATGTTTCTTCTTCAACGGAAGGGTTAC 2024
Query 2006 TAATGTCGTTGAATGATGTCACTGTTTCTGAGTT 2039
|||||||| |||||||| ||||||||||||||
Sbjct 2025 AAATGTCGTCAAATGATGTTACTGTTTCTGAGTT 2058
Score = 610 bits (330), Expect = 2e-173
Identities = 521/611 (85%), Gaps = 21/611 (3%)
Strand=Plus/Plus
Query 1 ATGGAACATGTCAGAGTTATCTTTTTCTTCTTTGCTTGTGTCCTAACGTTTG-TACCATT 59
||||||||||||||||||||| ||||||||||||||| |||||||| ||| | ||| |
Sbjct 32 ATGGAACATGTCAGAGTTATC---TTCTTCTTTGCTTGTTTCCTAACGCTTGCT-CCA-T 86
Query 60 TATC-TG-CTCAGCACAGACGGATAAATATGAGTTTCCTCCAAG-TTTCAACTGTGTAGC 116
| || || || || ||| ||| ||||||||| ||| || |||||||||||| |
Sbjct 87 T-TCATGCCTTTGCTCAGGTAGATTCCTATGAGTTTGATCC-AGATTTCAACTGTGTTG- 143
Query 117 TAGTGGAGGCAATTTCACGGCCAACAGCACTTTCGCCGATAATCTCAACGGCCTTGTCTC 176
| | | ||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||
Sbjct 144 -A-TCGTGGCAACTTCACGGCGAACAGCACTTTTGCCGGGAATCTCAACCGCCTTGTCTC 201
Query 177 CTCTCTTTCTTCACTCACATCCAAACCTTATGGCTTCTACAACCTCTCTTCTGGAGATTC 236
||| || || ||||||| |||| || ||||||||||||||||||||||||||||||| ||
Sbjct 202 CTCCCTCTCCTCACTCAAATCCCAAGCTTATGGCTTCTACAACCTCTCTTCTGGAGACTC 261
Query 237 ATCTGGAGAAAGAGCTTATGCAATTGCTCTGTGTAGAAGAGAAGTAAAAAGAGATGATTG 296
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 262 ATCTGGAGAAAGAGCTTATGCAATTGGTCTGTGTAGAAGAGAAGTCAAAAGAGATGATTG 321
Query 297 TCTCAGCTGCATTCAGATAGCTGCAAGAAACCTTATCGAGCAGTGTCCGCGGACAAAACA 356
| ||||||| ||||||| ||||||||||||||| | | |||||||||||| |||||||||
Sbjct 322 TGTCAGCTGTATTCAGACAGCTGCAAGAAACCTCACCAAGCAGTGTCCGCTGACAAAACA 381
Query 357 AGCTGTTGTATGGTACACGCACTGTATGTTTCGTTACTCGAACATGATAATCTATGGAAG 416
||||||||||||||||||||||||||||||||||||||| |||| || |||||| |||||
Sbjct 382 AGCTGTTGTATGGTACACGCACTGTATGTTTCGTTACTCAAACAGGACAATCTACGGAAG 441
Query 417 AAAAGAGACGACCCCAACTCTGTCTTTTCAA-GCCGGTAAAAATATATCAGCAAACAGAG 475
|||||| |||| ||| ||| | ||||| | || ||| || | ||||||||||||||||
Sbjct 442 AAAAGAAACGAACCCGACTAAGGCTTTT-ATTGCTGGTGAAGAGATATCAGCAAACAGAG 500
Query 476 ATGAGTTTGATCGTCTACAGATAGAACTATTGGACAGACTCAAAGGGATTGCTGCAGCTG 535
|||| ||||| ||||| |||| || ||||||||||||||||||||| ||||| || ||||
Sbjct 501 ATGACTTTGAGCGTCTGCAGAGAGGACTATTGGACAGACTCAAAGGAATTGCGGCTGCTG 560
Query 536 GTGGGCC-AATAGAAAATACGCTCAAGGGAGCGGTTCGGGTGT-GGCGGGGTACCCGCA- 592
||||||| ||||| |||||||||||||| | |||||| | | | ||| ||||||| | |
Sbjct 561 GTGGGCCTAATAGGAAATACGCTCAAGGAAACGGTTCAGCT-TCGGCTGGGTACCGG-AG 618
Query 593 ATTCTACGGAA 603
|||||| ||||
Sbjct 619 ATTCTATGGAA 629
Score = 320 bits (173), Expect = 3e-86
Identities = 238/269 (88%), Gaps = 6/269 (2%)
Strand=Plus/Plus
Query 604 GATTGTAATGACTGTCTAGTCTTTGGCTTTGAAAAGA-TCCCACGTTGTTGTGATGGC-C 661
||||||||||| ||| |||| ||||| ||||| || | ||| | ||||||||||| ||
Sbjct 662 GATTGTAATGATTGTTTAGTTTTTGGGTTTGAGAATATTCCGA-GTTGTTGTGAT-GCTG 719
Query 662 AGGTTGGTCTTAGGTGGTTTTTTCCTAGTTGTAGCTTCAGATTTGAGACGTGGCGATTCT 721
|| |||||||| ||||||||| ||||||||||| |||| | |||||||||||| ||||||
Sbjct 720 AGATTGGTCTTCGGTGGTTTTCTCCTAGTTGTAACTTCCGGTTTGAGACGTGGAGATTCT 779
Query 722 ATGAGTTCGATTCCGATCTAGAGCCTGATCCACCTGCTATTCAGCCTGCTGACTCACCAA 781
| ||||| ||| |||| |||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct 780 ACGAGTTTGATGCCGACCTAGAGCCAGATCCACCTGCAATTCAGCCTGCTGATTCACC-A 838
Query 782 C-ATCAGCTGCAAGAACTGAGAGAACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATC 840
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 839 CAATCAGCTGCAAGAACTGAGAGGACAGGAAAGGGCAAAGGTGGATCTAAAGTCATTATC 898
Query 841 GCGATAGTCGTCCCGATAGTTCTTGTTGC 869
||||||||| |||||||| ||||||||||
Sbjct 899 GCGATAGTCATCCCGATACTTCTTGTTGC 927
Score = 265 bits (143), Expect = 2e-69
Identities = 190/212 (90%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 998 TAGTTGACTTTGAAACTCTAAAGGA-AGCAACAGATAACTTTTCACCAGAAAACGAACTT 1056
||||| | ||||| |||||||| || |||||||||||||||||| ||||||||||||||
Sbjct 1062 TAGTTCATTTTGAGACTCTAAA-GACAGCAACAGATAACTTTTCTTCAGAAAACGAACTT 1120
Query 1057 GGACGTGGTGGCTTTGGCTCAGTTTATAAGGGTGTGTT--CTCGGGTGGGCAAGAAATCG 1114
||||||||||| ||||| |||||||||||||||||||| ||| | |||||||||||||
Sbjct 1121 GGACGTGGTGGGTTTGGTTCAGTTTATAAGGGTGTGTTCCCTC-AG-GGGCAAGAAATCG 1178
Query 1115 CGGTGAAAAGATTATCGTGTACTTCAGGACAAGGAGACATTGAATTCAAGAACGAAATTT 1174
||||||| ||||||||| ||| ||| ||||||||||||| || |||||||||||||| |
Sbjct 1179 CGGTGAAGAGATTATCGGGTAATTCTGGACAAGGAGACAACGAGTTCAAGAACGAAATAT 1238
Query 1175 TACTACTTGCAAAGCTTCAACATAGGAACTTG 1206
||||||||||||||||||||||||||||||||
Sbjct 1239 TACTACTTGCAAAGCTTCAACATAGGAACTTG 1270
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107378965755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5