BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg492797
Length=1656
Score E
Sequences producing significant alignments: (Bits) Value
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182... 2615 0.0
AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:17859... 1528 0.0
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-804... 992 0.0
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:69377... 968 0.0
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451... 907 0.0
AT2G34760.1 | Symbols: | pseudogene, tubulin beta chain -relat... 183 3e-45
> AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182092-11184072
FORWARD LENGTH=1693
Length=1693
Score = 2615 bits (1416), Expect = 0.0
Identities = 1596/1679 (95%), Gaps = 27/1679 (2%)
Strand=Plus/Plus
Query 1 AAACAATAAACAGAGGGAGTCGCCAAATTTTCTCATCATTTTCTCGAGAAAATAGAC--G 58
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17 AAACAATAAACAGAGGGAGTCGCCAAATTTTCTCATCATTTTCTCGAGAAAATAGACTAA 76
Query 59 AAGCGATTCCCGAGA-AAGGACaaaaaaaaaaaaaaaaCATCTG-GTGAAAATGAGAGAA 116
||||||||||||||| || || || || |||||||||||||| | |||||||||||||||
Sbjct 77 AAGCGATTCCCGAGAGAAAGA-AAGAACAAAAAAAAAACATCCGAGTGAAAATGAGAGAA 135
Query 117 ATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAAGTTCTGGGAAGTT 176
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 136 ATTCTTCATATTCAAGGAGGTCAGTGCGGAAACCAGATCGGAGCTAAGTTCTGGGAAGTT 195
Query 177 ATTTGCGGCGAGCATGGTATCGATCACACCGGTCAGTCATGTGGCGAAACAGATCTACAG 236
|||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct 196 ATTTGCGGCGAGCACGGTATTGATCAAACCGGTCAGTCATGTGGCGATACAGATCTACAG 255
Query 237 CTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGCGGAGGCAAATACGTTCCTCGCGCT 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 256 CTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGCGGAGGCAAATACGTTCCTCGTGCT 315
Query 297 GTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATCCGGGCCGTTTGGTCAG 356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 316 GTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATCTGGGCCGTTTGGTCAG 375
Query 357 ATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGTGCTGGGAATAACTGGGCGAAA 416
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 376 ATTTTCCGGCCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTGGGAATAACTGGGCGAAA 435
Query 417 GGTCACTACACGGAGGGAGCGGAGTTGATTGATTCTGTGCTTGATGTTGTGAGGAAGGAA 476
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 436 GGTCATTACACGGAGGGAGCTGAGTTGATTGATTCTGTGCTTGATGTTGTGAGGAAGGAA 495
Query 477 GCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCATTCGTTGGGAGGAGGAACT 536
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 496 GCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCATTCTTTGGGAGGAGGAACT 555
Query 537 GGTTCTGGCATGGGAACACTTCTTATTTCTAAGATAAGAGAGGAATATCCAGATCGTATG 596
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 556 GGTTCTGGAATGGGAACACTTCTTATTTCTAAGATTAGAGAGGAATATCCAGATCGTATG 615
Query 597 ATGATGACCTTTTCGGTTTTCCCTTCTCCTAAGGTTTCTGATACTGTGGTTGAGCCATAC 656
||||||||||||||||| ||||| ||||||||||| |||||||| || ||||||||||||
Sbjct 616 ATGATGACCTTTTCGGTCTTCCCATCTCCTAAGGTCTCTGATACAGTTGTTGAGCCATAC 675
Query 657 AATGCTACACTTTCTGTTCACCAGCTTGTTGAGAATGCTGATGAATGTATGGTTTTGGAT 716
|||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 676 AATGCTACTCTTTCCGTTCACCAGCTCGTTGAGAATGCTGATGAATGTATGGTTTTGGAT 735
Query 717 AATGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAAGCTTGCTAATCCTACATTTGGT 776
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 AACGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAAGCTTGCTAATCCTACATTTGGT 795
Query 777 GACCTTAACCACCTCATCTCAGCTACAATGAGTGGTGTTACATGCTGTCTTCGGTTCCCT 836
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 GACCTTAACCATCTCATCTCAGCTACAATGAGTGGTGTTACATGCTGTCTTCGGTTCCCT 855
Query 837 GGTCAACTAAACTCCGACCTTAGAAAACTTGCTGTGAACCTTATTCCTTTCCCACGACTC 896
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 856 GGTCAACTAAACTCTGACCTTAGAAAACTTGCTGTGAACCTTATTCCTTTCCCACGACTC 915
Query 897 CACTTCTTCATGGTTGGTTTTGCACCATTGACATCAAGAGGATCTCAACAATACAGTGCC 956
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 916 CACTTCTTCATGGTTGGTTTTGCACCTTTGACATCAAGAGGATCTCAACAATACAGTGCC 975
Query 957 TTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATGCCAAAAACATGATGTGTGCAGCT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 TTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATGCCAAAAACATGATGTGTGCAGCT 1035
Query 1017 GATCCCCGTCATGGTCGTTACTTGACAGCTTCTGCTGTGTTCCGTGGAAAGATGAGTACT 1076
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1036 GATCCTCGTCATGGTCGTTACTTGACAGCTTCTGCTGTCTTCCGTGGAAAGATGAGTACC 1095
Query 1077 AAAGAGGTTGATGAACAGATGATGAACGTCCAGAACAAAAATTCTTCATACTTTGTTGAA 1136
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1096 AAAGAGGTTGATGAACAGATGATGAACGTCCAGAACAAAAACTCCTCATACTTTGTTGAA 1155
Query 1137 TGGATTCCAAACAACGTGAAATCAAGCGTCTGTGATATAGCTCCCACGGGTTTGAAAATG 1196
||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1156 TGGATTCCAAATAACGTGAAATCAAGCGTCTGCGATATAGCTCCCACTGGTTTGAAAATG 1215
Query 1197 TCATCAACTTTCATTGGAAACTCAACTTCAATCCAGGAAATGTTCAGGCGTGTGAGTGAA 1256
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 GCATCAACTTTCATTGGAAACTCAACTTCAATCCAGGAAATGTTCAGGCGTGTGAGTGAA 1275
Query 1257 CAGTTCACAGCCATGTTCAGGAGAAAAGCTTTCCTTCATTGGTACACAGGAGAAGGAATG 1316
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1276 CAGTTCACTGCCATGTTCAGGAGAAAGGCTTTCCTTCATTGGTACACAGGAGAAGGAATG 1335
Query 1317 GACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAATGATCTGGTTGCAGAGTATCAG 1376
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1336 GACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAATGATCTTGTTGCAGAGTATCAG 1395
Query 1377 CAATATCAAGATGCTACAGTCGGTGAAGAGGAGTATGAGGAGGACgaagaagaagaagaa 1436
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1396 CAATATCAAGATGCTACAGTCGGTGAAGAGGAGTACGAGGAGGACGAAGAAGAAGAAGAA 1455
Query 1437 gaGGCTTAAAGAAAAGATGATTCATTACTACTTTTGTAAGGCTGTAAGTTCGTCGCACTC 1496
| || ||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1456 GC--CT-AAAGAAAAGATGATTGATTATTACTTTTGTAAGGCTGTAAGTTCGTCGCACTC 1512
Query 1497 ATTTC-TTTT------------G----G--ATTCTCTCTTTTTGTGCTTTGTGTGTTTTG 1537
||||| |||| | | ||||||||||||||||||||||||||||||
Sbjct 1513 ATTTCCTTTTACCTCTTTTTCTGAATTGGGATTCTCTCTTTTTGTGCTTTGTGTGTTTTG 1572
Query 1538 TTATTGAGTTTCTTTCCAAAAACTAAGATTTGTTCTGGAGTGTAATCCCATTTGCCTATG 1597
||||||| ||||||||| ||| ||||||||||||| |||||||||| ||||||||||||
Sbjct 1573 TTATTGAATTTCTTTCCCAAACCTAAGATTTGTTCCAGAGTGTAATCACATTTGCCTATG 1632
Query 1598 CTTCTTTGTTTTGTCTATGAAAATATTTCAATGTCAAAAGCCTATACAAATTCTATGAT 1656
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1633 CTTCTTTGTTTTGTCTATGAAAATATTTCAATGTCAAAAGCCTATACAATTTCTATGAT 1691
> AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:17859195-17861101
REVERSE LENGTH=1689
Length=1689
Score = 1528 bits (827), Expect = 0.0
Identities = 1166/1331 (88%), Gaps = 18/1331 (1%)
Strand=Plus/Plus
Query 105 AAAATGAGAGAAATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAAG 164
||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 105 AAAATGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAG 164
Query 165 TTCTGGGAAGTTATTTGCGGCGAGCATGGTATCGATCACACCGGTCAGTCATGT-GGCGA 223
||||||||||| || |||| ||| || || || |||||||||||||| | | || |||||
Sbjct 165 TTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCACACCGGTCAAT-ACGTCGGCGA 223
Query 224 --AACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGCGGAGGCAAA 281
| | | ||||||||||| | ||| |||||||||| |||||||||||||| || |||
Sbjct 224 TTCTCCG-T-TACAGCTTGAACGTATCGATGTCTATTTCAACGAAGCTAGCGGTGG-AAA 280
Query 282 -TACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATC 340
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 281 GTACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTACCATGGATTCTCTCAGATC 340
Query 341 CGGGCCGTTTGGTCAGATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGTGCTGG 400
|| ||||| |||||||||||||| || ||||||||||| ||||| || |||||||| ||
Sbjct 341 TGGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCTGGTGCCGG 400
Query 401 GAATAACTGGGCGAAAGGTCACTACACGGAGGGAGCGGAGTTGATTGATTCTGTGCTTGA 460
|||||||||||||||||||| ||||| || || || ||||||||||||||||| || ||
Sbjct 401 AAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTTGATTGATTCTGTTCTCGA 460
Query 461 TGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCATTC 520
||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 461 TGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGGTTTCCAAGTGTGTCATTC 520
Query 521 GTTGGGAGGAGGAACTGGTTCTGGCATGGGAACACTTCTT-ATTTCTAAGATAAGAGAGG 579
||||||||||||||||| ||||| |||||||| | | || ||||||||||||||||| |
Sbjct 521 ATTGGGAGGAGGAACTGGATCTGGAATGGGAACTC-TATTGATTTCTAAGATAAGAGAAG 579
Query 580 AATATCCAGATCGTATGATGATGACCTTT-TCGGT-TTTCCCTTCTCCTAAGGTTTCTGA 637
| |||||||||||||||||||||| |||| || || ||| |||||||||||||| |||||
Sbjct 580 AGTATCCAGATCGTATGATGATGA-CTTTCTCAGTGTTT-CCTTCTCCTAAGGTCTCTGA 637
Query 638 TACTGTGGTTGAGCCATACAATGCTACACTTTCTGTTCACCAGCTTGTTGAGAATGCTGA 697
||||| ||||||||||||||||| || || ||||| || |||||||| || || |||||
Sbjct 638 CACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTCGAAAACGCTGA 697
Query 698 TGAATGTATGGTTTTGGATAATGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAAGCT 757
|| |||||||||||||| ||||| ||||| ||||||||||||||||||||| | |||||
Sbjct 698 CGAGTGTATGGTTTTGGACAATGAGGCTCTCTACGATATCTGTTTCCGTACCCTCAAGCT 757
Query 758 TGCTAATCCTACATTTGGTGACCTTAACCACCTCATCTCAGCTACAATGAGTGGTGTTAC 817
||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct 758 CGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTACAATGAGTGGTGTCAC 817
Query 818 ATGCTGTCTTCGGTTCCCTGGTCAACTAAACTCCGACCTTAGAAAACTTGCTGTGAACCT 877
||||||||||| |||||||| || || ||||| |||||||| ||||| |||||||||||
Sbjct 818 TTGCTGTCTTCGTTTCCCTGGCCAGCTTAACTCTGACCTTAGGAAACTCGCTGTGAACCT 877
Query 878 TATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCATTGACATCAAGAGG 937
||| || |||||| | || |||||||||||||||||||| |||||||||||||| |||||
Sbjct 878 TATCCCATTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCACCATTGACATCGAGAGG 937
Query 938 ATCTCAACAATACAGTGCCTTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATGCCAA 997
||| || |||||||||||||||||||| ||||| || || || ||||||||||||| |||
Sbjct 938 ATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGGATG-CAA 996
Query 998 A-AACATGATGTGTGCAGCTGATCCC-CGTCATGGTCGTTACTTGACAGCTTCTGCTGTG 1055
| |||||||||||||| ||||| ||| |||||||| ||||||||||| || || ||||||
Sbjct 997 AGAACATGATGTGTGCTGCTGA-CCCTCGTCATGGACGTTACTTGACTGCATCCGCTGTG 1055
Query 1056 TTCCGTGGAAAGATGAGTACTAAAGAGGTTGATGAACAGATGATGAACGTCCAGAACAAA 1115
|||||||||||| |||| || ||||||||||| || |||||||||||| | ||||||||
Sbjct 1056 TTCCGTGGAAAGCTGAGCACCAAAGAGGTTGACGAGCAGATGATGAACATTCAGAACAAG 1115
Query 1116 AATTCTTCATACTTTGTTGAATGGATTCCAAACAACGTGAAATCAAGCGTCTGTGATATA 1175
|| || || |||||||| |||||||| ||||||||||| || || || |||||||||||
Sbjct 1116 AACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAGTGTCTGTGATATT 1175
Query 1176 GCTCCCACGGGTTTGAAAATGTCATCAACTTTCATTGGAAACTCAACTTCAATCCAGGAA 1235
|| || | ||||||||||||| | || ||||||||||| |||||||| |||||||||||
Sbjct 1176 GCACCAAAGGGTTTGAAAATGGCGTCTACTTTCATTGGTAACTCAACCTCAATCCAGGAG 1235
Query 1236 ATGTTCAGGCGTGTGAGTGAACAGTTCACAGCCATGTTCAGGAGAAAAGCTTTCCTTCAT 1295
||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1236 ATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTTTCCTTCAT 1295
Query 1296 TGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAAT 1355
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 TGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAAT 1355
Query 1356 GATCTGGTTGCAGAGTATCAGCAATATCAAGATGCTACAGTCGGTGAAGAGGAGTATGAG 1415
||||| || |||||||| ||||| || ||||||||||||| ||| || || ||||| |||
Sbjct 1356 GATCTTGTCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGAGAGGAAGAGTACGAG 1415
Query 1416 GAGGACgaaga 1426
||||| |||||
Sbjct 1416 GAGGAAGAAGA 1426
> AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-8044819
FORWARD LENGTH=1727
Length=1727
Score = 992 bits (537), Expect = 0.0
Identities = 1088/1352 (80%), Gaps = 46/1352 (3%)
Strand=Plus/Plus
Query 105 AAA-ATGAGAGAAATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAA 163
||| ||| |||| || ||||| || ||||| || || || ||||||||||||||||||||
Sbjct 83 AAAGATGCGAGAGATTCTTCACATACAAGGTGGCCAATGCGGAAACCAGATCGGAGCTAA 142
Query 164 GTTCTGGGAAGTTA-TTTGCGGCGAGCATGGTATCGAT-CACACCGGTCAG-T-C-ATGT 218
|||||||||||| | |||||| |||||| || |||||| | || || || | | | |
Sbjct 143 GTTCTGGGAAGT-AGTTTGCGCCGAGCACGGGATCGATTCG-ACGGGA-AGATACCAAG- 198
Query 219 G-GCGAAACAGATCTACAGCTTGAAAG-GATCAATGTCTATTTTAACGAAGCTAGCGGAG 276
| | ||| | ||| | || || ||| | | |||||||||| | |||||||| || | |
Sbjct 199 GAGAGAA-C-GATTTGCAACTCGAACGAG-TCAATGTCTACTACAACGAAGCGAGTTGCG 255
Query 277 GCAA-ATACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTC 335
| || || ||| || ||||| || || |||||||| |||||||| ||||||||| | ||
Sbjct 256 G-AAGATTCGTCCCACGCGCCGTCCTCATGGATCTAGAGCCTGGTACTATGGATAGTGTC 314
Query 336 AGATCCGGGCCGTTTGGTCAGATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGT 395
|||||||| |||| |||||||| ||||| || ||||||||||| ||||| || || |||
Sbjct 315 AGATCCGGTCCGTACGGTCAGATCTTCCGTCCTGATAACTTCGTATTTGGTCAATCCGGT 374
Query 396 GCTGGGAATAACTGGGCGAAAGGTCACTACACGGAGGGAGCGGAG-TTGATTGATTCTGT 454
|| || || || ||||| ||||| |||||||| || || || ||| || || ||||| ||
Sbjct 375 GCCGGTAACAATTGGGCTAAAGGACACTACACTGAAGGTGCTGAGCTT-ATCGATTCCGT 433
Query 455 GCTTGATGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTT-CAAGGTTTTCAAGTTT 513
|| |||||||| | |||||||||||||| ||||| || ||| ||||| || ||||| |
Sbjct 434 TCTCGATGTTGTTCGTAAGGAAGCTGAGAATTGTGACTG-CTTGCAAGGATTCCAAGTGT 492
Query 514 GTCATTCGTTGGGAGGAGGAACTGGTTCTGGCATGGGAACACTTCTT-ATTTCTAAGATA 572
|||| || || |||||||||||||| ||||| |||||||| || || ||||| |||||
Sbjct 493 GTCACTCATTAGGAGGAGGAACTGGATCTGGAATGGGAACG-TTGTTGATTTCAAAGATT 551
Query 573 AGAGAGGAATATCCAGATCGTATGATGATGACCTTTTCGGTTTTCCCTTCTCCTAAGGTT 632
|| || || ||||||||| | |||||| |||| ||||| || ||||| || || || ||
Sbjct 552 AGGGAAGAGTATCCAGATAGGATGATGCTGACGTTTTCTGTATTCCCATCACCGAAAGTG 611
Query 633 TCTGATACTGTGGTTGAGCCATACAATGCTACACTTTCTGTTCACCAGCTTGTTGAGAAT 692
|| || ||||| |||||||| || ||||| || || |||||||| |||||||| ||||||
Sbjct 612 TCAGACACTGTTGTTGAGCCTTATAATGCAACTCTCTCTGTTCATCAGCTTGTGGAGAAT 671
Query 693 GCTGATGAATGTATGGTT-TTGGATAATGAAGCTCTTTACGATATCTGTTTCCGTAC-CT 750
|| ||||| ||||||||| ||| | ||||||||||| || || || || ||| | || ||
Sbjct 672 GCAGATGAGTGTATGGTTCTTG-ACAATGAAGCTCTCTATGACATTTGCTTCAGAACTCT 730
Query 751 TGAAGCTTGCTAATCCTA-CATTTGGTGACCTT-AACCACCTCATCTCAGCTACAATGAG 808
| ||||| | | ||| | | ||||| ||| || || ||||||||||| || || |||||
Sbjct 731 T-AAGCTCACCACTCCAAGC-TTTGGAGAC-TTGAATCACCTCATCTCTGCAACCATGAG 787
Query 809 TGGTGTTACATGCTGTCTTCGGTTCCCTGGTCAACTAAACTCCGACCTTAGAAAACTTGC 868
|||||| || ||||| ||||| ||||| ||||| |||||||| ||||| | || |||||
Sbjct 788 TGGTGTCACTTGCTGCCTTCGTTTCCCGGGTCAGCTAAACTCTGACCTGCGCAAGCTTGC 847
Query 869 TGTGAACCTTATTCCT-TTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCATTGA 927
||||| ||| ||| ||||| || |||||||||||||||||||| ||||||||| | |
Sbjct 848 AGTGAAT-TTAATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGGTTTGCACCACTCA 906
Query 928 CATCAAGAGGATCTCAACAATACAGTGCCTTGAGTGTCCCTGAGCTAACTCAACAGATGT 987
|||| | ||||| || |||||||| ||||| | ||||||||||| |||||||||||||
Sbjct 907 CATCTCGTGGATCACAGCAATACAGAGCCTTAACCGTCCCTGAGCTCACTCAACAGATGT 966
Query 988 GGGATGCCAAAAACATGATGTGTGCAGCTGATCCCCGTCATGGTC-GTTACTTGACAGCT 1046
|||||||||| || |||||||||||||||||||| || || || | | |||||||||||
Sbjct 967 GGGATGCCAAGAATATGATGTGTGCAGCTGATCCACGCCACGG-CAGGTACTTGACAGCC 1025
Query 1047 TCTGCTGTGTTCCGTGG-AAAGATGAGTACTAAAGAGGTTGATGAACAGATGATGAACGT 1105
|| || ||||| | || ||| ||||| || ||||| ||||| ||||||||||| |||||
Sbjct 1026 TCAGCCATGTTCAGAGGCAAA-ATGAGCACGAAAGAAGTTGACGAACAGATGATCAACGT 1084
Query 1106 CCAGAACAAAAATTCTTCATACTTTGTTGAATGGATTCCAAACAACGTGAAATCAAGCGT 1165
|||||||| || || ||||||||||| |||||||| ||||||||||||||||||| |||
Sbjct 1085 TCAGAACAAGAACTCGTCATACTTTGTGGAATGGATCCCAAACAACGTGAAATCAACCGT 1144
Query 1166 CTGTGATATAGCTCCCACGGGTTTGAAAATGTCATCAACTTTCATTGGAAACTCAACTTC 1225
||||| || | || || ||| |||||||| | || |||||||| || ||||| || ||
Sbjct 1145 GTGTGACATTCCACCAACAGGTCTGAAAATGGCTTCGACTTTCATCGGGAACTCGACATC 1204
Query 1226 AATCCAGGAAATGTTCAGGCGTGTGAGTGAACAGTTCACAGCCATGTTCAGGAGAAAAGC 1285
|||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 1205 GATCCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCGATGTTCAGAAGAAAAGC 1264
Query 1286 TTTCCTT-CATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGA 1344
|||| || |||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 1265 TTTC-TTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACAGAGGCAGAGA 1323
Query 1345 GTAACATGAATGATCTGGT-TGCAGAGTATCAGCAATATCAAGATGCTACAGTCGG-TGA 1402
| |||||||||||| |||| | |||||||||| || || ||||| || || | | | |||
Sbjct 1324 GCAACATGAATGATTTGGTAT-CAGAGTATCAACAGTACCAAGACGCAACGG-CTGATGA 1381
Query 1403 AGAGGA-G--TATGAGGAGGACgaagaagaag 1431
|| || | |||||| | || ||||| ||||
Sbjct 1382 GGAAGAAGGGTATGAGTATGAAGAAGACGAAG 1413
> AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:6937795-6940582
REVERSE LENGTH=1689
Length=1689
Score = 968 bits (524), Expect = 0.0
Identities = 1086/1356 (80%), Gaps = 44/1356 (3%)
Strand=Plus/Plus
Query 107 AATGAGAGAAATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAAGTT 166
||||||||| |||||||| |||||||| ||||| || || |||||||| || | |||||
Sbjct 101 AATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGTAACCAGATTGGTTCCAAGTT 160
Query 167 CTGGGAAGTTATTTGCGGCGAGCATGGTATCGA-TCACACCGGTCAG-T-CATGTGGCGA 223
||||||||| || |||| |||||| || ||||| || |||||| | | | || |||| ||
Sbjct 161 CTGGGAAGTCATCTGCGACGAGCACGGCATCGATTC-CACCGGAC-GTTACA-GTGGAGA 217
Query 224 -A--ACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGC-GGAGGCA 279
| ||||||| ||||||||| | ||||||||||||| || |||||| | || || |
Sbjct 218 CACTGCAGATCTCCAGCTTGAACGTATCAATGTCTATTACAATGAAGCT-TCAGGTGG-A 275
Query 280 A-ATACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGA 338
| |||||||||||| ||||||||||||||||| |||||||| ||||||||| | |||||
Sbjct 276 AGATACGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGATAGTATCAGA 335
Query 339 TCCGGGCCGTTTGGTCAGATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGTGCT 398
||||| |||||||||||||| ||||| || |||||||| || ||||| ||||||||||||
Sbjct 336 TCCGGACCGTTTGGTCAGATCTTCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCT 395
Query 399 GGGAATAACTGGGCGAAAGGTCACTACACGGAGGGAGC-GGAGTTGATTGATTCTGTGCT 457
|| ||||| ||||| |||||||| ||||| || || || | | || |||||| |||| ||
Sbjct 396 GGTAATAATTGGGCTAAAGGTCATTACACTGAAGGTGCTGAACTT-ATTGATGCTGTTCT 454
Query 458 TGATGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCA 517
||||||||| | || |||||||||||||| ||||| |||||||| ||||| || || ||
Sbjct 455 TGATGTTGTTCGTAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTCAGGTGTGCCA 514
Query 518 TTCGTTGGGAGGAGGAACTGGTTCTGGCATGGGAACACTTCTT-ATTTCTAAGATAAGAG 576
||||||||||||||| || ||||| || |||||||||| | || || || ||||| |||
Sbjct 515 TTCGTTGGGAGGAGGCACAGGTTCAGGAATGGGAACAC-TATTGATATCGAAGATCCGAG 573
Query 577 AGGAATATCCAGATC-GTATGATGATGACCTTT-TCGGTTTTCCCTTCTCCTAAGGTTTC 634
|||| |||||||| | | |||||| | | |||| || |||||||| |||||||| || ||
Sbjct 574 AGGAGTATCCAGA-CAGAATGATGCTCA-CTTTCTCTGTTTTCCCATCTCCTAAAGTCTC 631
Query 635 TGATACTGTGGTTGAGCCATACAATGCTACACTTTCTGTTCACCAGCTTGTTGAGAATGC 694
||| || || |||||||| |||||||| || || ||||| || |||||||| ||||| ||
Sbjct 632 TGACACAGTCGTTGAGCCTTACAATGCAACTCTCTCTGTCCATCAGCTTGTAGAGAACGC 691
Query 695 TGATGAATGTATGGTTTTGGATAATGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAA 754
||||||||| ||||| | || ||||||||||| ||||||||||| ||||||||| | ||
Sbjct 692 TGATGAATGCATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAA 751
Query 755 GCT-TGCTAATCCTA-CATTTGGTGACCTT-AACCACCTCATCTCAGCTACAATGAGTGG 811
|| || | ||||| | ||||| || ||| ||||| | ||||| || |||||||| ||
Sbjct 752 ACTCAGC-ACTCCTAGC-TTTGGAGA-CTTGAACCATTTGATCTCCGCAACAATGAGCGG 808
Query 812 TGTTACATGCTGTCTT-CGGTTCCCTGGTCAACTAAACTCCGACCTTAGAAAACTTGCTG 870
||| || |||| ||| ||||||| || ||||||||||| ||||| || ||||| || |
Sbjct 809 TGTGACTTGCT-CCTTAAGGTTCCCCGGACAACTAAACTCTGACCTCAGGAAACTCGCGG 867
Query 871 TGAACCTTATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCATTGACAT 930
||||||| || || ||||| || ||||| ||||||||||| |||||||| || | || |
Sbjct 868 TGAACCTAATCCCATTCCCTCGTCTCCATTTCTTCATGGTGGGTTTTGCGCCCCTCACTT 927
Query 931 CAAGAGGATCTCAACAATACAGTGC-C-TTGAGTGTCCCTGAGCTAACTCAACAGATGTG 988
| | || || |||||||||| | | | | | || |||||||| |||||||| |||||
Sbjct 928 CCCGTGGCTCGCAACAATACA-T-CTCACTCACCGTTCCTGAGCTGACTCAACAAATGTG 985
Query 989 GGA-TGCCAAAAACATGATGTGTGCAGCTGATCCCCGTCATGGTCGTTACTTGACAGCTT 1047
||| | |||||||||||||||||||||||||||| ||||| || |||||| | ||||| |
Sbjct 986 GGACT-CCAAAAACATGATGTGTGCAGCTGATCCACGTCACGGACGTTACCTCACAGCCT 1044
Query 1048 CTGCTGTGTTCCGTGGAAAGATGAGTACTAAAGAGGTTGATGAACAGATGATGAACGTCC 1107
||||| | ||| | ||| ||||||| || ||||| || || || || || | ||| | |
Sbjct 1045 CTGCTATTTTCAGAGGACAGATGAGCACAAAAGAAGTCGACGAGCAAATCCTAAACATAC 1104
Query 1108 AGAACAAAAATTCTTCATACTTTGTTGAATGGATTCCAAACAACGTGAAATCAAGCGTCT 1167
||||||| || || || ||||| ||||| ||||| ||||||||||||||||| ||||| |
Sbjct 1105 AGAACAAGAACTCGTCTTACTTCGTTGAGTGGATCCCAAACAACGTGAAATCCAGCGTTT 1164
Query 1168 GTGATATAGCTCCCACGGGTTTGAAAATGTCATCAAC-TTTCATTGGAAACTCAACTTCA 1226
||||||| | || | ||| | |||||| | | || ||| | || ||||| || ||
Sbjct 1165 GTGATATCCCACCAAAGGGGCTCAAAATGGCGGCGACGTTT-GTGGGTAACTCGACGTCG 1223
Query 1227 ATCCAGGAAATGTTCAGGCGTGTGAGTGAACAGTTCACAGCCATGTTCAGGAGAAAAGC- 1285
|| || |||||||||||| | |||||||| |||||||| || ||||| ||| | |||||
Sbjct 1224 ATTCAAGAAATGTTCAGGAGAGTGAGTGAGCAGTTCACGGCTATGTTTAGGCGTAAAGCG 1283
Query 1286 TTTCCTTCATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAG 1345
||| || ||||||||||||||||||||||||||||| |||||||| || ||||| |||||
Sbjct 1284 TTT-CTGCATTGGTACACAGGAGAAGGAATGGACGAAATGGAGTTTACGGAAGCTGAGAG 1342
Query 1346 TAACATGAATGATCTGGTTGCAGAGTATCAGCAATATCAAGATGCTACAGTCGGTGAAGA 1405
|| ||||||||| |||| || || || || || || ||||||||||| | | ||| ||
Sbjct 1343 CAATATGAATGATTTGGTCGCTGAATACCAACAGTACCAAGATGCTACTG-C--TGATGA 1399
Query 1406 GGA-GTATGAGGAGGACgaagaagaagaagaagaGG 1440
||| | |||| | || | ||||||||||| ||||
Sbjct 1400 GGAAGG-TGAGTATGATGTTGAAGAAGAAGAGGAGG 1434
> AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451141-28453640
REVERSE LENGTH=1619
Length=1619
Score = 907 bits (491), Expect = 0.0
Identities = 1073/1352 (79%), Gaps = 47/1352 (3%)
Strand=Plus/Plus
Query 108 ATGAGAGAAATCCTTCATATTCAAGGAGGTCAGTGTGGAAACCAGATCGGAGCTAAGTTC 167
|||||||||||||| || | ||||| || || || || ||||| ||||| | || |||
Sbjct 39 ATGAGAGAAATCCTCCACGTCCAAGGCGGCCAATGCGGTAACCAAATCGGTTCCAAATTC 98
Query 168 TGGGAAGTTATTTGCGGCGAGCATGGTATCGATCACACCGGTCAG-T-C-A-TGTGGCGA 223
||||||||||| |||| ||| || || | |||| |||||| | | | | | |||
Sbjct 99 TGGGAAGTTATCTGCGACGAACACGGCGTTGATCCCACCGGAC-GTTACAACGGTGATTC 157
Query 224 AACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGC-GGAGG-CAAA 281
| ||||| ||||| ||| | |||||||| |||| || |||||| | || || |
Sbjct 158 CGCCGATCTTCAGCTCGAACGTATCAATGTTTATTACAATGAAGCT-TCTGGTGGTC-GT 215
Query 282 TACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATCC 341
||||||||||| |||||||| |||||||| |||||||| ||||||||| | |||||||
Sbjct 216 TACGTTCCTCGTGCTGTTCTCATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCT 275
Query 342 GGGCCGTTTGGTCAGATTTTCCGGCCGGATAACTTCGTGTTTGGGCAGTCTGGTGCTGGG 401
|| || | |||||||||||||| || ||||||||||| ||||| || || ||||| ||
Sbjct 276 GGTCCCTACGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGA 335
Query 402 AATAACTGGGCGAAAGGTCACTACACGGAGGGAGC-GGAGTTGATTGATTCTGTGCTTGA 460
||||| |||||||||||||| || || || || || | | || |||||| |||| || ||
Sbjct 336 AATAATTGGGCGAAAGGTCATTATACTGAAGGTGCTGAACTT-ATTGATGCTGTTCTCGA 394
Query 461 TGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCA-T- 518
|||||| | ||||||||||||||||||||||| |||||||| |||||||| ||||| |
Sbjct 395 TGTTGTTCGTAAGGAAGCTGAGAACTGTGATTGCCTTCAAGGGTTTCAAGTATGTCACTC 454
Query 519 TCGTTGGGAGGAGGAACTGGTTCTGGCATGGGAACACTTCTT-ATTTCTAAGATAAGAGA 577
|| || |||||||| || ||||| || |||||||| | |||| || || ||||| | ||
Sbjct 455 TC-TT-GGAGGAGGCACGGGTTCAGGAATGGGAACTC-TCTTGATATCAAAGATCCGTGA 511
Query 578 GGAATATCCAGATC-GTATGATGATGACCTTTTCGGTTTTCCCTTCTCCTAAGGTTTCTG 636
|||||| ||||| | | |||||| | || || || |||||||| ||||| ||||| || |
Sbjct 512 GGAATACCCAGA-CAGAATGATGCTCACATTCTCTGTTTTCCCATCTCCAAAGGTCTCAG 570
Query 637 ATACTGTGGTTGAGCCATACAATGCTACACTTTCTGTTCACCAGCTTGTTGAGAATGCTG 696
| || || |||||||| |||||||| || || || || ||||| ||||| ||||||||||
Sbjct 571 ACACAGTCGTTGAGCCGTACAATGCAACTCTCTCAGTCCACCAACTTGTAGAGAATGCTG 630
Query 697 ATGAATGTATGGTTTTGGATAATGAAGCTCTTTACGATATCTGTTTCCGTACCT-TGAAG 755
||||||| ||||| | || || |||||||||||||||||||||||||| | || | ||
Sbjct 631 ATGAATGCATGGTCCTCGACAACGAAGCTCTTTACGATATCTGTTTCCGCA-CTCTCAAA 689
Query 756 CT-TGCTAATCCTA-CATTTGGTGACCTT-AACCACCTCATCTCAGCTACAATGAGTGGT 812
|| || | ||||| | ||||| || ||| |||||| | ||||| || || |||||||||
Sbjct 690 CTCAGC-ACTCCTAGC-TTTGGAGA-CTTGAACCACTTGATCTCCGCAACTATGAGTGGT 746
Query 813 GTTACATGCTGTCTT-CGGTTCCCTGGTCAACTAAACTCCGACCTTAGAAAACTTGCTGT 871
|| || |||| | || | |||||||| ||||| ||||| |||||||| ||||| || ||
Sbjct 747 GTGACTTGCTCT-TTAAGATTCCCTGGACAACTCAACTCTGACCTTAGGAAACTCGCCGT 805
Query 872 GAACCTTATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCAT-TGACAT 930
||||||||| || ||||| || || || ||||||||||||||||| || || | | || |
Sbjct 806 GAACCTTATCCCATTCCCTCGTCTACATTTCTTCATGGTTGGTTTCGC-CCCTCTCACTT 864
Query 931 CAAGAGGATCTCAACAATACAGTGC-CT-TGAGTGTCCCTGAGCTAACTCAACAGATGTG 988
| | || |||||||| |||| | | || | | ||||| ||||| || || || |||||
Sbjct 865 CCCGTGGCTCTCAACAGTACA-T-CTCTCTCACAGTCCCGGAGCTGACACAGCAAATGTG 922
Query 989 GGATGCCAAAAACATGATGTGTGCAGCTGATCCCCGTCATGGTCGTTACTTGACAGCTTC 1048
||| || || ||||||||||||||||||||||| || || || |||||| | ||||||||
Sbjct 923 GGACGCTAAGAACATGATGTGTGCAGCTGATCCACGCCACGGACGTTACCTCACAGCTTC 982
Query 1049 TGCTGTGTTCCGTGGAAAGATGAGTACTAAA-GAGGTTGATGAACAGATGATGAACGTCC 1107
|| ||||||| ||||| ||||| || ||| || || || |||||||| | || ||||
Sbjct 983 AGCCATGTTCCGAGGAAAAATGAGCAC-AAAGGAAGTGGACGAACAGATCCTAAATGTCC 1041
Query 1108 AGAACAAAAATTCTTCATACTTTGTTGAATGGATTCCAAACAACGTGAAATCAAGCGTCT 1167
||||||| || || || ||||||||||||||||| |||||||| ||||| || |||||||
Sbjct 1042 AGAACAAGAACTCATCCTACTTTGTTGAATGGATCCCAAACAATGTGAAGTCCAGCGTCT 1101
Query 1168 GTGATATAGCTCCCACGGGTTTGAAAATGTCATCAAC-TTTCATTGGAAACTCAACTTCA 1226
| || || | || || || | |||||| | || || ||| | |||||||| |||||
Sbjct 1102 GCGACATTCCACCAACTGGAATCAAAATGGCTTCCACGTTT-GTCGGAAACTCGACTTCG 1160
Query 1227 ATCCAGGAAATGTTCAGGCGTGTGAGTGAACAGTTCACAGCCATGTTCAGGAGAAAAGCT 1286
|||||||||||||||||| | || || ||||||||||| || ||||||||| | ||||||
Sbjct 1161 ATCCAGGAAATGTTCAGGAGAGTAAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAGCT 1220
Query 1287 TTCCTT-CATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAG 1345
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 TT-CTTGCATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAG 1279
Query 1346 TAACATGAATGATCTGGT-TGCAGAGTATCAGCAATATCAAGATGCTACAGTCGG-TGAA 1403
||||||||||||||||| | | || || || ||||| ||||||||||| | | | ||||
Sbjct 1280 CAACATGAATGATCTGGTCT-CTGAATACCAACAATACCAAGATGCTACCG-CTGATGAA 1337
Query 1404 GAGGA-GTATGAGGAGGACgaagaagaagaag 1434
|| || | || | || || ||||||||| |||
Sbjct 1338 GAAGACGAAT-ATGATGAAGAAGAAGAACAAG 1368
> AT2G34760.1 | Symbols: | pseudogene, tubulin beta chain -related,
similar to beta-7 tubulin GI:416149 from (Zea mays); blastp
match of 47% identity and 3.0e-15 P-value to SP|Q41784|TBB7_MAIZE
Tubulin beta-7 chain (Beta-7 tubulin). (Maize) {Zea
mays} | chr2:14664671-14666076 REVERSE LENGTH=1406
Length=1406
Score = 183 bits (99), Expect = 3e-45
Identities = 131/146 (90%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 1277 GAGAAAAGCTTTCCTT-CATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTG 1335
|||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||| | ||
Sbjct 1223 GAGATAAGCTTT-CTTGCATTGGTACACAGAAGAAGGAATGGACGAGATGGAGTTTAATG 1281
Query 1336 AAGCAGAGAGTAACATGAATGATCTGGTTGCAGAGTATCAGCAATATCAAGATGCTACAG 1395
||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||||
Sbjct 1282 AAGCAGAGAGTAACATGAACGATCTTGTGGCTGAGTATCAGCAATATCAAGATGCTACAG 1341
Query 1396 TCGG-TGAAGAGGAGTATGAGGAGGA 1420
| | ||||||||||||| | |||||
Sbjct 1342 -CTGATGAAGAGGAGTATAAAGAGGA 1366
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81826888350
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5