BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg492886 Length=967 Score E Sequences producing significant alignments: (Bits) Value AT4G19840.1 | Symbols: ATPP2-A1, ATPP2A-1, PP2-A1 | phloem prot... 1448 0.0 > AT4G19840.1 | Symbols: ATPP2-A1, ATPP2A-1, PP2-A1 | phloem protein 2-A1 | chr4:10774273-10775901 FORWARD LENGTH=1004 Length=1004 Score = 1448 bits (784), Expect = 0.0 Identities = 911/972 (94%), Gaps = 9/972 (1%) Strand=Plus/Plus Query 1 GTCAAGTTGAATATACTGATCTAA-ATAACAAATTTATCAAAAATAAGTACATCATATTG 59 |||||||||||| |||||||| || |||||||||||||||||||||| ||||||||| || Sbjct 1 GTCAAGTTGAATGTACTGATC-AAGATAACAAATTTATCAAAAATAAATACATCATACTG 59 Query 60 GTTTACGGGCAAGAAACATTGCTCAGAGTTATTACCAAAGAAGATGTTTGGCAACCAGGA 119 ||||| | ||||||||||||||||||| ||||||||||| ||||||||| | ||||| || Sbjct 60 GTTTATGAGCAAGAAACATTGCTCAGAATTATTACCAAATAAGATGTTTAGAAACCAAGA 119 Query 120 ATCGAAATACTTGATCCCGGTGCAGAAAGAAGCGTCACCGGTGACAACTTTACCGATGAA 179 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 120 CTCGAAATACTTGATCCCGGTGCAGAAAGAAGCGCCACCGGTGACAACTTTACCGATGAA 179 Query 180 AGCATCACCGGTGAAATCTCCACATAACTGTGAGGCCATTCTCAGAGACGCAGATCCTCC 239 ||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 180 AGCTTCAACGGTGAAATCTCCACACAACTGTGAGGCCATTCTCAGAGACGCAGATCCTCC 239 Query 240 GA--TCTCTGT-CTCTGTTAATCTCTCTGAACAGCTACGGTCTGGTGTTTTCTTGAAGCC 296 || ||||| | ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 240 GATCTCTCTCTCCTCTGTTAATCTCTCTGAACAGCTACGGTCTGGTGTTTTCTTGAAACC 299 Query 297 CACGAAACAGATCAAATATTGGGTGGACGAGAGAAACAGCAACTGCTTCATGCTCTTTGC 356 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CAAGAAACAGATCAAATATTGGGTGGACGAGAGAAACAGCAACTGCTTCATGCTCTTTGC 359 Query 357 AAAGAACCTCTCTATCACTTGGTCTGATGACGTCAACTATTGGACTTGGTTTAACGACAA 416 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || Sbjct 360 AAAGAACCTCTCTATAACTTGGTCTGATGACGTCAACTATTGGACTTGGTTTACCGAAAA 419 Query 417 AGAGTCACCAAACGAGACTGTGGAGGCTGTGGGATTGAAAAACGTTTGTTGGCTCGACAT 476 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 420 AGAGTCACCAAACGAGAATGTGGAAGCTGTGGGATTGAAAAACGTTTGTTGGCTCGACAT 479 Query 477 CACGGGAAAATTTGACACGAGGAACCTCACTCCGGGGATTGCTTACGAGGTGGTCTTTAA 536 |||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 480 CACGGGAAAATTCGACACGAGGAACCTCACTCCGGGGATTGTTTACGAGGTAGTCTTTAA 539 Query 537 GGTGAAGCTAGAGGATCCGGCCTATGGATGGGACACGCCGGTGAACGTAAAGCTAGTATT 596 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 540 GGTGAAGCTAGAGGATCCGGCCTATGGATGGGACACGCCGGTGAACCTAAAGCTAGTCTT 599 Query 597 GCCTAACGGTAAGGA-ACAACCGCAGGAGCACAAGGTGAGTTTGAGGGAACTTCCAAGGT 655 ||||||||||||||| | |||| || ||| | |||||||||||||||||||||||||||| Sbjct 600 GCCTAACGGTAAGGAGA-AACCACAAGAGAAAAAGGTGAGTTTGAGGGAACTTCCAAGGT 658 Query 656 ATAAATGGGTCGATGTCAGAGTCGGCGAGTTCGTACCGGAGAAATCTGCTGCCGGAGAGA 715 |||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| Sbjct 659 ATAAATGGGTCGATGTCAGAGTTGGCGAGTTCGTACCTGAGAAATCCGCTGCCGGAGAGA 718 Query 716 TCACTTTCTCAATGTATGAGCATGAGGCTGGCGTTTGGAAGAAAGGGCTCTCCCTCAAAG 775 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 719 TCACTTTCTCAATGTATGAGCATGCGGCTGGTGTTTGGAAGAAAGGGCTCTCCCTCAAAG 778 Query 776 GTGTTGCAATTCGTCCCAAACAGTAATAATCAATATGGCATATAAAAACATATAAATATC 835 |||||||||||||||||||||||||||||| ||||||||| ||||||||| || | || Sbjct 779 GTGTTGCAATTCGTCCCAAACAGTAATAATTGTTATGGCATAGAAAAACATA-AA-TCTC 836 Query 836 CATATGCACCAATGGACCTTCTCTACATGTGTTTCACATCATGTCATGTGTGTATAATAA 895 ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 837 CATATGCACCAATGGACCTTCTCAACATATATTTCACATCATGTCATGTGTGTATAATAA 896 Query 896 GGTTGATCTATCGTATTATTAGTTTAAATAACAACTTTGATGTTGGTGTTGAATAAATTT 955 ||||| ||||||||||| ||||||| ||||| |||||| |||||||||||||||||| | Sbjct 897 GGTTGTTCTATCGTATTTTTAGTTTTAATAATAACTTTAATGTTGGTGTTGAATAAACTC 956 Query 956 AAAACGAGTGTT 967 |||||||||||| Sbjct 957 AAAACGAGTGTT 968 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47320566474 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5