BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493041
Length=2559
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18250.1 | Symbols: | receptor serine/threonine kinase, put... 3009 0.0
AT1G70250.1 | Symbols: | receptor serine/threonine kinase, put... 922 0.0
> AT4G18250.1 | Symbols: | receptor serine/threonine kinase, putative
| chr4:10087343-10091963 REVERSE LENGTH=2562
Length=2562
Score = 3009 bits (1629), Expect = 0.0
Identities = 2271/2571 (88%), Gaps = 84/2571 (3%)
Strand=Plus/Plus
Query 4 TTGTCAATGAGTATCCTTACCATAGAGAACAAATGCGATTACACAGTCTGGCCAGTAATC 63
||||| |||||||||||||||||||||||||| ||| || ||||||| |||||||| |||
Sbjct 19 TTGTCCATGAGTATCCTTACCATAGAGAACAAGTGCAATCACACAGTTTGGCCAGTTATC 78
Query 64 TTTTCATGGAA-GTT-A--C-CGA-TCTCCCCAAAC-GGCTTCGCTCTCACAAGCGGGGA 116
|| |||||||| ||| | | | | ||||||| ||| ||||| ||||||| ||| |||||
Sbjct 79 TTCTCATGGAACGTTGACTCACAAGTCTCCCC-AACAGGCTTTGCTCTCAGAAGAGGGGA 137
Query 117 GGCACGTA-CCGTACATGCG-GAGTCTTCGTGGTACGGTCTTATATCTGG-TCGGACGCT 173
||| || | || |||| ||| | ||||| |||||||||||||| || || | |||||||
Sbjct 138 GGCTCG-AGCCCTACAGGCGCCA-TCTTCATGGTACGGTCTTATCTC-GGCTAGGACGCT 194
Query 174 CTGCTCAACCAACTCTAGAGGAA-ATTTCTCGTGCGCTACCGGAGACTGCCAATCCGGCA 232
||||| | | |||| | ||||| | ||||| ||||| || ||||||||| |||| || |
Sbjct 195 ATGCTCCATCGACTCAACAGGAACA-TTCTCTTGCGCCACAGGAGACTGCGAATCGGGTA 253
Query 233 ATATCGAGTGTCCCGACGAA-TACGAG-TGGTCTGCTGTGACTTATGTGTA-TTTAAGAA 289
||||||||||| | | || |||| | ||| || | ||||||||||| || ||| ||
Sbjct 254 CGATCGAGTGTCCTGGC-AATTACG-GTTGGGCTCCGGTGACTTATGTCTACTTT-AG-- 308
Query 290 TCAATAATGGTGGCATCAACAGCTACACCATCAGTGTTGAGTATGGTTACAACCTTCCGC 349
|| | | |||||||||||||||||||||||||| |||||||||||||| |
Sbjct 309 -----AA---T-G----AACAGCTACACCATCAGTGTTGAGTACGGTTACAACCTTCCAC 355
Query 350 TAATGGTCGTCCCGTCACATAGTAG-CGGTACATGTATCAGCTCGGGTTGTATGGTTGAT 408
||||||| ||||| ||||| |||| ||| |||||||||||| | ||||| | |||||
Sbjct 356 TAATGGTGGTCCCTTCACAGCGTAGCCGG-ACATGTATCAGCGCTGGTTGCGTTGTTGAA 414
Query 409 CTGAAAAAGACATGTCCTGATGATCTTGA-GTTATTCACCGGGGAGAAA-CAAATCGGTT 466
||||||||||| ||||| | |||||| | | | | || | || ||| | | ||| |
Sbjct 415 CTGAAAAAGACTTGTCCAAAAGATCTT-ATGAAAATGTCCAGAGA-AAATCTAGTCGCCT 472
Query 467 GCATTAGCGCGTGTCGA--AAATACGGTACCT-GGGAGATTTGTTGCACAC-ATGACTTC 522
| | |||| |||| | | | | | || || |||| ||||||||| | | ||||||
Sbjct 473 GTAGTAGCACGTG-C-ATGGAGTTTGATA-CTCCGGAGGCTTGTTGCACCCGA-GACTTC 528
Query 523 -AGTTCAAAGC-AAACTTGCAAACCAACACAGTACACGCAGAACTTCGAGCGAGCTTGCC 580
|| ||||||| |||| ||||| || ||| ||||||||||||||| |||||||||||||
Sbjct 529 AAG-TCAAAGCAAAAC-TGCAAGCCGACAGTGTACACGCAGAACTTTGAGCGAGCTTGCC 586
Query 581 CATCTGC-CT-ATAGCTACGCCTACAACAATAATAACAGCA-CGTTCATATGCCCT-AAC 636
|| || | || ||| ||||||||| | |||| || |||| |||| | ||| ||| |||
Sbjct 587 CA-CT-CGCTCATATCTACGCCTATGATGATAACAATAGCACCGTT-ACATG-CCTAAAC 642
Query 637 TCAACTGACTTCGTCATCACTATCCTTACCATAGAGAACAAATGTAGTAACACAATTTGG 696
|| ||||||| ||||||||||||| | |||||||| |||||||| | ||||||||||||
Sbjct 643 TCTACTGACTACGTCATCACTATCATAACCATAGAAAACAAATGCAACAACACAATTTGG 702
Query 697 CCAGTCATCTTTTCATGGCGGTCACAAGTCTCCACCACCGGCTTCACTCTCAAGACCGGA 756
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 703 CCAGTCATCTTCTCATGGCGGTCACAAGTTTCCACCACCGGCTTCACTCTCAAGACCGGA 762
Query 757 GAGGCGCGAGCCATACACGCGCCATCTTCATGGTACGGTCTTATCTCGGCTAGGACGCTA 816
|||| || |||||| |||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 763 GAGGAACGTGCCATAAACGCACCATCTTCATGGTACGGTCTTATCTCAGCTAGGACTCTT 822
Query 817 TGCTCC-A--ACTCAACAGGAAATTTCTCATGCGCCACGGGAGACTGCGAATCCGGCGAG 873
|||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 823 TGCTCCAATGACTCAACAGGAAACTTCTCATGCGCCACGGGAGACTGTGAATCCGGCGAG 882
Query 874 ATAGAGTGCCCCGGCGCATACAGTTGGTCTCCTGTGACTTACATCTTATTTAGAATCGAT 933
|| ||||| |||||| | |||| ||||||||||| |||||| || ||||||||||||||
Sbjct 883 ATCGAGTGTCCCGGCACCTACAAATGGTCTCCTGTAACTTACGTCATATTTAGAATCGAT 942
Query 934 GATGG-CGGAATCAACAGCTATATCATCAGCCTCGAGTACGGTTACAACCTGCCACTAGC 992
|| || | ||||||||||||||||||||||||||||| |||||||||||| |||||| |
Sbjct 943 GACGGAC-AAATCAACAGCTATATCATCAGCCTCGAGTTCGGTTACAACCTTCCACTAAC 1001
Query 993 GGTTGTTCCGTCAAGCCCGGCATGTAGCAGCTCAGGTTGTATGGTTGACTTGAACAAGAC 1052
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1002 GGTTGTTCCGTCAAACCCGGCATGTATCAGCTCAGGTTGTATGGTTGACTTGAACAAGAC 1061
Query 1053 ATGTCCAAATGATCTTAAGAAATTCTCCAAGG-GAGATTTAGTTGCCTGCAATAGCGCGT 1111
||||||||||||||||||| |||||||| ||| ||| |||||| |||||||| || ||||
Sbjct 1062 ATGTCCAAATGATCTTAAGGAATTCTCC-AGGAGAGGTTTAGTCGCCTGCAAAAGTGCGT 1120
Query 1112 GTCAAGAATCCGAATCCCAGGAGAATTGTTGCACAAATTACTTCAACTCA-AAGCAAACT 1170
||| | |||||| |||| | |||||||||||||| ||||||||||| | | |||||||||
Sbjct 1121 GTCGACAATCCGCATCCGATGAGAATTGTTGCACTAATTACTTCAAGT-ATAAGCAAACT 1179
Query 1171 TGTAAGCCGACACAGTACGTACAGAACTTCGACCGTGCTTGTCCATTCGCTTATAGCTAC 1230
||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1180 TGTAAGCCGACACCGTACGTACAGAACTTCGACCGTGCTTGCCCATCCGCTTATAGCTAC 1239
Query 1231 CCCTACAACGGTAATAACAGTACCTTCACATGCACAAATTCAACTGACTACATGATCACG 1290
|||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1240 CCCTTCAGCGGTAATAACAGTACCTTCACATGCACAAATTCAACTGATTACGTGATCACG 1299
Query 1291 TTTTGCCCCTCCTCTATTCCCAACACCACCAGAAGCTCGATGGCTCCATTTCCTGAACCA 1350
||||| |||||||| |||||||||||||| || ||||||||||||| | | || |||||
Sbjct 1300 TTTTGTCCCTCCTCCATTCCCAACACCACAAGCAGCTCGATGGCTCAACTACCACAACCA 1359
Query 1351 AAAGATAATTCTCTAAGGACGTTAAAACCCATACTTGGAGGCTCAGCAGCTTTAGCTGTG 1410
||| ||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||
Sbjct 1360 AAACATAATTCTCTACGGAAGTTAAAACCGATACTTGGAGGCTCAGCAGCTTTAATTGTG 1419
Query 1411 TTGATCATTCTTGTTGTGATTGCGGC-AGTAGTGAGAGCAAAGAATGCGAAAAGAAAGAG 1469
||||||| | ||||||||||||| || |||||||||||| | | ||||||||||||||||
Sbjct 1420 TTGATCAGTATTGTTGTGATTGC-GCTAGTAGTGAGAGCGAGGCATGCGAAAAGAAAGAG 1478
Query 1470 TGAATTGAACGACGAGAACATTGAAGCGGTTGTGATGTTAAAACGTTATAGTTTTGAAAA 1529
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1479 TGAATTGAACGACGAGAACATTGAAGCGGTTGTGATGTTGAAACGTTATAGCTTTGAAAA 1538
Query 1530 AGTCAAGAAGATGACAAACTCGTTTGATCATGTTATAGGGAAAGGAGGATTTGGAACTGT 1589
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1539 AGTCAAGAAGATGACAAACTCGTTTGATCATGTTATTGGGAAAGGAGGATTTGGAACTGT 1598
Query 1590 CTATAAAGGAAAACTACCGGATGCTAGCGGCCGAGATATTGCACTGAAGATCTTGAAAGA 1649
|||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1599 CTATAAAGGAAAACTACCCGATGCCAGCGGCCGAGATATTGCTCTGAAGATCTTGAAAGA 1658
Query 1650 GTCAAAGGGGAATGGAGAAGAGTTCATCAATGAACTAGTTAGCATGAGTAGAGCTTCTCA 1709
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659 GTCAAAAGGGAATGGAGAAGAGTTCATCAATGAACTAGTTAGCATGAGTAGAGCTTCTCA 1718
Query 1710 TGTTAATATCGTTTCTCTGTTTGGATTTTGTTATGAAGGGAGCCAGAGAGCTATTATCTA 1769
|||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1719 TGTTAACATCGTTTCTCTTTTTGGATTTTGCTATGAAGGGAGCCAGAGAGCTATTATCTA 1778
Query 1770 CGAGTTCATGCCGAACGGATCGCTTGACAAGTTTATATCCGAGAATATGTCTACGAAGAT 1829
||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 1779 CGAGTTCATGCCGAATGGATCCCTTGACAAGTTTATATCCGAGAATATGTCAACAAAGAT 1838
Query 1830 AGACTGGAAAACGTTATACAACATTGCCGTAGGTGTTGCTCGCGGGTTAGAGTACTTGCA 1889
||| |||||||| ||||||||||| || |||||||||||||| ||| | |||||||||||
Sbjct 1839 AGAGTGGAAAACATTATACAACATCGCGGTAGGTGTTGCTCGTGGGCTCGAGTACTTGCA 1898
Query 1890 CAATAGTTGTGTATCCAAGATTGTGCATTTCGATATAAAGCCACAGAATATACTCATAGA 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1899 CAATAGTTGTGTATCCAAGATTGTGCATTTCGATATAAAGCCACAGAATATACTCATAGA 1958
Query 1950 CGAAGACTTTTGCCCGAAGATTTCGGATTTCGGTCTTGCTAAGTTGTGCAAAAAGAAAGA 2009
||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 1959 CGAAGACTTATGCCCGAAGATTTCGGATTTCGGTCTTGCTAAGCTATGCAAAAAGAAAGA 2018
Query 2010 AAGTATCATATCAATGTTAGACGCGAGAGGGACAGTAGGCTACATTGCTCCTGAAATGTT 2069
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2019 AAGTATCATATCAATGTTAGACGCGAGAGGGACAGTAGGGTACATTGCTCCTGAAATGTT 2078
Query 2070 TTCCAAGAACTATGGAGGAGTTTCGCATAAGTCGGATGTGTATAGTTATGGAATGGTGGT 2129
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2079 TTCCAAGAACTATGGAGGAGTTTCGCATAAGTCAGATGTGTATAGTTATGGAATGGTGGT 2138
Query 2130 TCTTGAGATGATCGGGGCGACGAAAAGAGAAGAAGTTAAAACTTCTACGACCAATAAAAG 2189
|||||||||||| ||||| |||||||||||||||||| |||||||| ||||| |||||||
Sbjct 2139 TCTTGAGATGATTGGGGCAACGAAAAGAGAAGAAGTTGAAACTTCTGCGACCGATAAAAG 2198
Query 2190 TTCAATGTACTTTCCAGATTGGGTCTATGAGGATCTTgagaggaaagaaaccatgagact 2249
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2199 TTCAATGTACTTTCCTGATTGGGTCTATGAGGATCTTGAGAGGAAAGAAACCATGAGACT 2258
Query 2250 attagaagatcatagaatcgaagaagaagaaga-ga-a-gatagtgaagaaAATGACATT 2306
|||||||||||||| |||||||||||||||||| || | ||||||||||| |||||||||
Sbjct 2259 ATTAGAAGATCATATAATCGAAGAAGAAGAAGAAGAGAAGATAGTGAAGAGAATGACATT 2318
Query 2307 AGTAGGTTTGTGGTGTATACAGACCAATCCAT-TGGATCGTCCACCAATGAGAAAAGTTG 2365
||| ||||||||||||||||| |||||||||| || ||||||||||||||||||||||||
Sbjct 2319 AGTGGGTTTGTGGTGTATACAAACCAATCCATCTG-ATCGTCCACCAATGAGAAAAGTTG 2377
Query 2366 TTGAAATGTTAGAGGGAAGTC-T--AGAAGCTCTACAGGTCCCACCTAAGCCTCTCTTGA 2422
|||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||
Sbjct 2378 TTGAAATGTTAGAGGGCAGTCGTCTAGAAGCTCTACAGGTTCCACCTAAGCCTCTCTTGA 2437
Query 2423 ATTTACATGTAGTAACAGATTGGGAAACTGCTGAAGATAATCAAG-GTACTTCTACTCTC 2481
||||||| |||||||| |||||||||||| ||||||||| |||| | ||||||| |||
Sbjct 2438 ATTTACACGTAGTAACGGATTGGGAAACTTCTGAAGATAGTCAACAG-ACTTCTAGACTC 2496
Query 2482 TCGACACAAAGCTTGTTAAACAGAAAAACTCTTTCGAATCGCCACTATACT 2532
|||||||||||||||||| | |||||||||| ||||||| ||| ||||||
Sbjct 2497 TCGACACAAAGCTTGTTAGAGAGAAAAACTCGTTCGAATTACCAATATACT 2547
Score = 316 bits (171), Expect = 5e-85
Identities = 509/663 (77%), Gaps = 60/663 (9%)
Strand=Plus/Plus
Query 657 TATCCTTACCATAGAGAACAAATGTAGTAACACAATTTGGCCAGTCATCTTTTCATGG-- 714
||||||||||||||||||||| || | | ||||| |||||||||| ||||| ||||||
Sbjct 30 TATCCTTACCATAGAGAACAAGTGCAATCACACAGTTTGGCCAGTTATCTTCTCATGGAA 89
Query 715 CG--G--TCACAAGTCTCCACC-ACCGGCTTCACTCTCAAG-ACCGGAGAGGCGCGAGCC 768
|| | |||||||||||| || || ||||| ||||| || | || ||||| ||||||
Sbjct 90 CGTTGACTCACAAGTCTCC-CCAACAGGCTTTGCTCTC-AGAAGAGGGGAGGCTCGAGCC 147
Query 769 ATACACGCGCCATCTTCATGGTACGGTCTTATCTCGGCTAGGACGCTATGCTCCA---AC 825
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 148 CTACAGGCGCCATCTTCATGGTACGGTCTTATCTCGGCTAGGACGCTATGCTCCATCGAC 207
Query 826 TCAACAGGAA-ATTTCTCATGCGCCACGGGAGACTGCGAATCCGGCGA-GATAGAGTGCC 883
|||||||||| ||| ||| |||||||| |||||||||||||| || | ||| ||||| |
Sbjct 208 TCAACAGGAACATT-CTCTTGCGCCACAGGAGACTGCGAATCGGGT-ACGATCGAGTGTC 265
Query 884 CCGGCGCAT-ACAGTTGGTCTCCTGTGACTTACATCTTA-TTTAGAATCGATGATGGCGG 941
| ||| || || ||||| |||| |||||||| ||| | |||||||| || | | |
Sbjct 266 CTGGCA-ATTACGGTTGGGCTCCGGTGACTTATGTCT-ACTTTAGAAT-GAACA-G-C-- 318
Query 942 AATCAACAGCTATATCATCAGCCTCGAGTACGGTTACAACCTGCCACTAGCGGTTGTTCC 1001
| | || | |||||| | ||||||||||||||||| |||||| ||| || ||
Sbjct 319 --T-A-CA-C-----CATCAGTGTTGAGTACGGTTACAACCTTCCACTAATGGTGGTCCC 368
Query 1002 GTCA-AGC----CCGG-CATGTAGCAGCTCAGGTTGTATGGTTGA-CTTGAACAAGACAT 1054
||| ||| |||| |||||| |||| | ||||| | ||||| || ||| ||||| |
Sbjct 369 TTCACAGCGTAGCCGGACATGTATCAGCGCTGGTTGCGTTGTTGAACT-GAAAAAGACTT 427
Query 1055 GTCCAAATGATCTTAAGAAATTCTCCAAGGGAGATT-TAGTTGCCTGCAATAGCGCGTGT 1113
||||||| ||||||| |||| | |||| | || | | |||| ||||| | |||| ||||
Sbjct 428 GTCCAAAAGATCTTATGAAAATGTCCA-GAGAAAATCTAGTCGCCTGTAGTAGCACGTG- 485
Query 1114 CAAGAA-TCCGA-A-TCCCAGGAGAATTGTTGCACAA-ATTACTTCAACTCAAAGCAAA- 1168
|| | | | || | ||| |||| ||||||||| | ||||||| ||||||||||
Sbjct 486 CATGGAGTTTGATACTCC--GGAGGCTTGTTGCACCCGAG-ACTTCAAGTCAAAGCAAAA 542
Query 1169 CTTGTAAGCCGACACAGTACGTACAGAACTTCGACCGTGCTTGTCCATTCGCTTATAGCT 1228
|| | ||||||||| |||| |||||||| || || ||||| ||| ||||| ||| ||
Sbjct 543 CT-GCAAGCCGACAGTGTACACGCAGAACTTTGAGCGAGCTTGCCCACTCGCTCATATCT 601
Query 1229 ACCCCTACAACGGTAATAACAGTACC-TTCACATGCAC-AAATTCAACTGACTACATGAT 1286
|| |||| | | ||| || || ||| || |||||| | ||| || ||||||||| | ||
Sbjct 602 ACGCCTATGATGATAACAATAGCACCGTT-ACATGC-CTAAACTCTACTGACTACGTCAT 659
Query 1287 CAC 1289
|||
Sbjct 660 CAC 662
> AT1G70250.1 | Symbols: | receptor serine/threonine kinase, putative
| chr1:26452965-26456088 FORWARD LENGTH=2410
Length=2410
Score = 922 bits (499), Expect = 0.0
Identities = 883/1064 (83%), Gaps = 43/1064 (4%)
Strand=Plus/Plus
Query 1371 GTTAAAACCCATACTTGGAGGCTCAGCAGCT-TTAGCTGTGTTGATCATTCTTGTTGTGA 1429
|||||||| ||||||||||| ||| ||| | || ||| |||||| || ||||||
Sbjct 1216 GTTAAAACTCATACTTGGAGTTTCATCAG-TATTGGCTACAATGATCA---TTATTGTGA 1271
Query 1430 TTGCGGCAGTA-GTGAGAGCAAAGAATGCGAAAAGAAAGAGTGAATTGAACGACG-AGAA 1487
||| || | | || |||||||| ||| | ||||||||||| ||||| || | ||||
Sbjct 1272 TTGTGGGA-AAGGTTAGAGCAAATAAT---ATGAGAAAGAGTGATTTGAATGA-GAAGAA 1326
Query 1488 CATTGAAGCGGTTGTGATGTTAAAACG-TTATAGTTTTGAAAAAGTCAAGAAGATGACAA 1546
||| ||||| || || ||||| ||||| || ||||| || | ||||||||||||||||||
Sbjct 1327 CATGGAAGCAGTGGTAATGTTGAAACGATT-TAGTTATGTACAAGTCAAGAAGATGACAA 1385
Query 1547 ACTCGTTTGATCATGTTATAGGGAAAGGAGGATTTGGAACTGTCTATAAAGGAAAACTAC 1606
| || ||||| ||||| | |||||||| ||||||||||||||||||||||| || |||
Sbjct 1386 AATCATTTGAGAATGTTCTTGGGAAAGGGGGATTTGGAACTGTCTATAAAGGGAAGTTAC 1445
Query 1607 CGGATGCTAGCGGCCGAGATATTGCACTGAAGATCTTGAAAGAGTCAAA-GGGGAATGGA 1665
| |||| || |||||||| ||||| ||||||||||||| |||||||| | || |||||
Sbjct 1446 CTGATG---GCAGCCGAGATGTTGCAGTGAAGATCTTGAAGGAGTCAAACGAGG-ATGGA 1501
Query 1666 GAAGAGTTCATCAATGAACTAGTTAGCATGAGTA-GAGCTTCTCATGTTAATATCGTTTC 1724
||||| |||||||||||| ||| ||||||||||| || | ||||||| ||||||||||||
Sbjct 1502 GAAGACTTCATCAATGAAATAGCTAGCATGAGTAGGA-CATCTCATGCTAATATCGTTTC 1560
Query 1725 TCTGTTTGGATTTTGTTATGAAGGGAGCCAGAGAGCTATTATCTACGAGTTCATGCCGAA 1784
||| ||||||| |||||||||||||| ||| |||||| || |||||||| ||||||||
Sbjct 1561 TCTACTTGGATTCTGTTATGAAGGGAGGAAGAAAGCTATAATTTACGAGTTGATGCCGAA 1620
Query 1785 CGGATCGCTTGACAAGTTTATATCCGAGAATATGTCTACGAAGATAGACTGGAAAACGTT 1844
||||| || |||||||| || ||| |||||||||| ||||||| || |||||||||||
Sbjct 1621 TGGATCCCTCGACAAGTTCATCTCCAAGAATATGTCGGCGAAGATGGAATGGAAAACGTT 1680
Query 1845 ATACAACATTGCCGTAGGTGTTG-CTCGCGGGTTAGAGTACTTGCACA-ATAGTTGTGTA 1902
|||||||||||| ||||||| || ||| || |||| |||||||| | | |||||||
Sbjct 1681 ATACAACATTGCGGTAGGTG-TGTCTCATGGCCTAGAATACTTGCATAGCCA-TTGTGTA 1738
Query 1903 TCCAA-GATTGTGCATTTCGATATAAAGCCACAGAATATACTCATAGACGAAGACTTTTG 1961
| ||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct 1739 T-CAAGGATTGTACATTTCGATATAAAGCCACAGAACATACTCATAGATGGAGACTTATG 1797
Query 1962 CCCGAAGATTTCGGATTTCGGTCTTGCTAAG-TTGTGCAAAAAGAAAGAAAGTATCATAT 2020
||| ||||||||||||||||||||||||||| || |||||||| || ||||| ||||| |
Sbjct 1798 CCCTAAGATTTCGGATTTCGGTCTTGCTAAGCTT-TGCAAAAATAATGAAAGCATCATTT 1856
Query 2021 CAATGTTAGACGCGAGAGGGA-CAGTAGGCTACATTGCTCCTGAAATGTTTTCCAAGAAC 2079
||||| || | || ||||| | || |||| ||||||||||| ||| |||| ||| ||||
Sbjct 1857 CAATGCTACATGCAAGAGGCACCA-TAGGGTACATTGCTCCAGAAGTGTTCTCCCAGAAT 1915
Query 2080 TATGGAGGAGTTTCGCATAAGTCGGATGTGTATAGTTATGGAATGGTGGTTCTTGAGATG 2139
| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1916 TTTGGAGGAGTTTCTCATAAGTCTGATGTGTATAGTTATGGAATGGTGGTTCTTGAGATG 1975
Query 2140 ATCGGGGCGACGAAAAGAG-AAGAAGTT-AAAACTTCTACGA-CCAATAAAAGTTCAATG 2196
|| || || | ||| | || |||| | | |||| | || || ||| ||| | |||||||
Sbjct 1976 ATTGGAGCAAGGAACATAGGAAGA-GCTCAAAA-TGCTG-GATCCAGTAATACTTCAATG 2032
Query 2197 TACTTTCCAGATTGGGTCTATGAGGATCTTgaga--ggaaagaaaccatgagactattag 2254
||||||||||||||| | ||| | |||||||||| ||| |||| |||||| | || |
Sbjct 2033 TACTTTCCAGATTGGATTTATAAAGATCTTGAGAAAGGA--GAAATCATGAGTTTTTTGG 2090
Query 2255 aagatcatagaatcgaagaagaagaagagaagatagtgaagaaAATGACATTAGTAGGTT 2314
|||||| | || |||||||||||| ||||||||||| ||||||||| ||| || |||
Sbjct 2091 CAGATCAAATAACCGAAGAAGAAGATGAGAAGATAGTAAAGAAAATGGTATTGGTGGGTC 2150
Query 2315 TGTGGTGTATACAGACCAATCCAT-TGGATCGTCCACCAATGAGAAAAGTTGTTGAAATG 2373
|||||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||
Sbjct 2151 TGTGGTGTATTCAGACCAATCCATATG-ATCGTCCACCAATGAGCAAAGTTGTTGAAATG 2209
Query 2374 TTAGAGGGAAGTCTAGAAGCTCTACAGGTCCCACCTAAGCCTCT 2417
||||||||||||||||| ||||| ||| | ||||||||||||||
Sbjct 2210 TTAGAGGGAAGTCTAGAGGCTCTCCAGATTCCACCTAAGCCTCT 2253
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127022699676
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5