BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493128 Length=1019 Score E Sequences producing significant alignments: (Bits) Value AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family... 1293 0.0 AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family... 523 1e-147 > AT4G17486.1 | Symbols: | PPPDE putative thiol peptidase family protein | chr4:9749728-9751709 REVERSE LENGTH=1084 Length=1084 Score = 1293 bits (700), Expect = 0.0 Identities = 768/801 (96%), Gaps = 3/801 (0%) Strand=Plus/Plus Query 1 CGATCATTTTTGCAGTGTCTCTTACAAACCAATCCC-TTCTTCTCAGTTTTTTAGTGTTG 59 |||||||||||||||| |||| | | |||||||||| |||| ||| | | | | ||||| Sbjct 26 CGATCATTTTTGCAGTCTCTC-TCCCAACCAATCCCATTCTGCTC-GACTCTCATTGTTG 83 Query 60 CAGAGGTTTAGGAAGAAAGGAATGATTCGATCGTGACTTTGAATTGGGATTTTGTGTGTA 119 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 84 CAGAGGTTTAGGAAGAAAGGAATGGTTCGATCGTGACTTTGAATTGGGATATTGTGTGTA 143 Query 120 AAATGTGGGTGCCTACATTGAGCTCAAGCTCATCTTCAAGTGATGAGAGGGAAGAGAGCA 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 144 AAATGTGGGTGCCTACATTGAGCTCAAGCTCATGTTCAAGTGATGAGAGGGATGAGAGCA 203 Query 180 GTGGAGAAGCCGGGCTTACGCCGGTTTATCTCAATGTCTATGATCTAACGCCTGTCAACA 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 204 GTGGAGAAGCCGCGCTTACGCCGGTTTATCTCAATGTCTATGATCTAACGCCTGTCAACA 263 Query 240 ATTACCTTTATTGGTTTGGGATTGGCATATTCCATTCTGGAATTGAGGCTCATAATTTGG 299 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 264 ATTACCTTTATTGGTTTGGGATTGGCATTTTCCATTCTGGTATTGAGGCTCATAATTTGG 323 Query 300 AATATTGCTATGGAGCTCACGAGTATCCAACAAGTGGGGTATATGAGGTGGAACCTAGGA 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 324 AATATTGCTATGGAGCTCACGAGTATCCAACAAGTGGGGTATATGAGGTGGAACCTAGGA 383 Query 360 GCTGTCCAGGTTTCATCTTTAGACGGTCGGTTTTATTGGGAACTACCAGCATGTCTCGTT 419 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 384 ACTGTCCAGGGTTCATCTTTAGACGGTCGGTTTTACTGGGAACTACCAGCATGTCCCGTT 443 Query 420 CAGATTTCCGCTCATACATGGAGAAGCTTTCAAGAAAATACCATGGTGACACTTACCATT 479 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 444 CAGATTTCCGCTCATACATGGAGAAGCTTTCAAGAAAGTACCATGGTGACACTTACCATT 503 Query 480 TGATTGCCAAGAACTGTAACCATTTTACTGAAGAAGTATGCTTGCAGCTTACAGGAAAGC 539 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 504 TGATTGCCAAGAACTGTAACCATTTCACTGAAGAAGTATGCTTGCAGCTAACAGGAAAGC 563 Query 540 CTATTCCAGGATGGATTAATCGGCTAGCCCGTGTAGGTTCGTTCTGTAATTGTCTTCTGC 599 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 564 CTATTCCAGGATGGATTAATCGGCTGGCCCGAGTAGGTTCCTTCTGTAATTGTCTTCTGC 623 Query 600 CAGAAAGCATTCAGCTTACAGCTGTTAGTGTTCTTCCCGAACGCCTTGAATTCTCCGATG 659 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 624 CAGAAAGCATTCAGCTTACAGCTGTTAGTGCTCTTCCCGAACGCCTTGAATTCTCCGATG 683 Query 660 AGGAGGAATCAAACTCAGAGGCATCTTCTGTGTCGGATGAAGAAGGATCAGAGCAGCATC 719 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 684 AGGATGAATCAAACTCAGAGGCATCTTCTGTGTCAGATGAAGAAGGATCAGAGCAGCATC 743 Query 720 TCATAAATGCAGCAGACAGAGAGATTGTGTATCTACAAAACAAACCAGTGCGACTTACCA 779 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 744 TCATAAATGTAGCAGACAGAGAGATTGTGTATCTACAAAACAAACCAGTGCGACTTACCA 803 Query 780 GAGAGGAGATCCCCTGAGAAA 800 ||||||||||||||||||||| Sbjct 804 GAGAGGAGATCCCCTGAGAAA 824 Score = 289 bits (156), Expect = 4e-77 Identities = 185/198 (93%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 827 AGTGT-GTGTGCCCATGGAAGCTGAAAGGGAGTAAG-T-GATATCTCCTTTTGTCACCTT 883 ||||| |||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 887 AGTGTGGTGTGCCCATGGAAGCTGAAAGGGAGTAAGTTATATATCTCGTTTTGTCACCTT 946 Query 884 AATGCTGCGTTTCTTCTGTCGGAAATTCGATTTGGTATTCTTCTCATCATTTTAGGAATG 943 | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 947 AGTGCTGCGTTGGTTCTGTCGGAAATTCGATTTGGTATTCTTCTCATCATTTTAGGAATG 1006 Query 944 TAAAAACGGATTCC-GGATTTATTTTAATCAGACCAACC-TTTGGCAGTAAAAATCTGAA 1001 |||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||| || Sbjct 1007 TAAAAACGGATTCCCGGATTCATTTTAATCAGAC-AACCCTTTGGCAGTAAAAATCTAAA 1065 Query 1002 GATTTCTCCATATTTTCC 1019 |||||||||||||||||| Sbjct 1066 GATTTCTCCATATTTTCC 1083 > AT5G47310.1 | Symbols: | PPPDE putative thiol peptidase family protein | chr5:19200782-19202921 FORWARD LENGTH=1167 Length=1167 Score = 523 bits (283), Expect = 1e-147 Identities = 559/688 (81%), Gaps = 36/688 (5%) Strand=Plus/Plus Query 115 GTGTAAAATGTGGGTGCCTACATTGAGCTCAAGCTCAT-CTTCAAGTGATGA-GAGG--G 170 |||||||||| |||||| | ||||||||||||| || | || |||| || ||| | Sbjct 176 GTGTAAAATGCGGGTGCTTGGTTTGAGCTCAAGCTTATGC-TCTGGTGAGGATAAGGAAG 234 Query 171 AAG-AGAG--CAGTGGAGAAGCCGGGCTTACGCCGGTTTATCTCAATGTCTATGATCTAA 227 ||| |||| | |||||||| | || ||||| ||||||||||| ||||||||||||| Sbjct 235 AAGAAGAGATTAATGGAGAAGGCTCTCTCACGCCTGTTTATCTCAACGTCTATGATCTAA 294 Query 228 CGCCTGTCAACAATTACCTTTATTGGTTTGGGATTGGCATATTCCATTCTGGAATTGAGG 287 | |||||||||||||| || |||||||| || |||||||||| || ||||| ||||||| Sbjct 295 CTCCTGTCAACAATTATCTCTATTGGTTCGGCCTTGGCATATTTCACTCTGGCATTGAGG 354 Query 288 CTCATAATTTGGAATATTGCTATGGAGCTCACGAGTA-TCCAACAAGTGGGGTATATGAG 346 ||||| ||| |||||| | ||||||||||| ||||| || | | |||||||||| |||| Sbjct 355 CTCATGGTTTCGAATATGGATATGGAGCTCATGAGTATTCGAGC-AGTGGGGTATTTGAG 413 Query 347 GTGGAACCTAGGAGCTGTCCAGGTTTCATCTTTAGACGGTCGGTTTTATTGGGAACTACC 406 || |||||||||||||||||||||||||||||||| || || ||||| |||||||| ||| Sbjct 414 GTTGAACCTAGGAGCTGTCCAGGTTTCATCTTTAGGCGCTCAGTTTTGTTGGGAACCACC 473 Query 407 AGCATGTCTCGTTCAGATTTCCGCTCATACATGGAGAAGCTTTCAAGAAAATACCATGGT 466 ||||||||||| || ||||||||||| | ||||||||||||||| ||||| || ||||| Sbjct 474 AGCATGTCTCGCTCTGATTTCCGCTCCTTCATGGAGAAGCTTTCGAGAAAGTATCATGGG 533 Query 467 GACACTTACCATTTGATTGCCAAGAACTGTAACCATTTTACTGAAGAAGTATGCTTGCAG 526 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 534 GACACATACCATTTGATTGCCAAAAACTGTAACCATTTCACTGAAGAAGTATGCTTGCAG 593 Query 527 CTTACAGGAAAGCCTATTCCAGGATGGATTAATCGGCTAGCCCGTGTAGGTTCGTTCTGT 586 | ||||||||||||||||| |||||||||||| || | || || || |||||||||||| Sbjct 594 GTAACAGGAAAGCCTATTCCTGGATGGATTAATAGGATGGCTCGAGTTGGTTCGTTCTGT 653 Query 587 AATTGTCTTCTGCCAGAAAGCATTCAGCT-TACAGCTGTTAGTGTTCTTCCCGAACGCCT 645 || ||| | || ||||||||||| ||||| | || | |||| | | ||| ||| ||| Sbjct 654 AACTGTATCCTTCCAGAAAGCATACAGCTCT-CATCGGTTAAT---CATCCTGAA-GCCC 708 Query 646 T-GAATTCTCCGATGAG---GA-GGAATCA-AAC--TCAGAGGCATCTTCTGTGTC---- 693 | || ||||| ||||| || ||| ||| || |||| |||||||||||||| Sbjct 709 TCGAGTTCTCTGATGATAACGATGGA-TCAGAAGAATCAGTTGCATCTTCTGTGTCATAC 767 Query 694 G-----GATGAAGAAGGATCAGAGCAGCATCTCATAA-ATGCAGCAGACAGAGAGATTGT 747 | |||| ||||||||| || || |||||||||| | ||| || |||| || |||| Sbjct 768 GAAACAGATGGAGAAGGATCGGATCATCATCTCATAACA-GCACCAAACAGCGATATTGC 826 Query 748 GTATCTACAAAACAAACCAGTGCGACTT 775 ||||||||| ||| ||||||| ||||| Sbjct 827 GTATCTACAGGACAGACCAGTGAGACTT 854 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49932742118 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5