BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493199
Length=2415
Score E
Sequences producing significant alignments: (Bits) Value
AT4G16760.1 | Symbols: ACX1, ATACX1 | acyl-CoA oxidase 1 | chr4... 3805 0.0
AT2G35690.1 | Symbols: ACX5 | acyl-CoA oxidase 5 | chr2:1499975... 1869 0.0
> AT4G16760.1 | Symbols: ACX1, ATACX1 | acyl-CoA oxidase 1 | chr4:9424633-9428864
REVERSE LENGTH=2467
Length=2467
Score = 3805 bits (2060), Expect = 0.0
Identities = 2318/2438 (95%), Gaps = 36/2438 (1%)
Strand=Plus/Plus
Query 1 AAAAGCTTAATTTTTCTCCCAACTACTCTGCAATTAAATCGGTAGAGTGAGACATTGGCC 60
|||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 12 AAAAGCTTAATTGTTCTTCCAACTACTCTGCAATTAAATCGGTAGAGTGAGGCATTGTCC 71
Query 61 ATCGTTTTCTCGCTCTGTTTTCTGGGCTTGtttttttCCTATCATCTCTGAGAGTTTTCT 120
|| ||||||| ||||||||| | || ||||||||||||||||||||||||||||||
Sbjct 72 TTCTTTTTCTCCCTCTGTTTT-T-TTTTTTTTTTTTTCCTATCATCTCTGAGAGTTTTCT 129
Query 121 CGGGAAAGTTTTTTAGTGTTTAGCTACTGGATTTTGAATTTACGAATCAATGGAAGGAGT 180
|| |||| |||| |||||||||||||| |||| |||| ||||||||| ||||||||| |
Sbjct 130 CGAGAAA-CTTTTGAGTGTTTAGCTACTAGATTCTGAA-TTACGAATC-ATGGAAGGAAT 186
Query 181 TGATCACCTTGCTGATGAGAGGAACAAGGCGGAGTTCGACGTCGAGGAGATGAAGATCGT 240
||||||||| || |||||||| ||||| || ||||||||||| ||||| |||||||||||
Sbjct 187 TGATCACCTCGCCGATGAGAGAAACAAAGCAGAGTTCGACGTTGAGGATATGAAGATCGT 246
Query 241 CTGGGCTGGTTCCCGCCACGCTTTTGAGGTTTCCGATCGAATTGCCCGTCTCGTCGCCAG 300
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 247 CTGGGCTGGTTCCCGCCACGCTTTTGAGGTTTCCGATCGAATTGCCCGCCTTGTCGCCAG 306
Query 301 CGATCCGGTATTTGAGAAAAGCAATAGAGCTCGGTTGAGTAGGAAGGAGCTGTTTAAGAG 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 307 CGATCCGGTATTTGAGAAAAGCAATCGAGCTCGGTTGAGTAGGAAGGAGCTGTTTAAGAG 366
Query 361 TACGTTGAGAAAATGTGCTCATGCCTTTAAGAGGATTATCGAGCTTCGTCTCACTGAGGA 420
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||
Sbjct 367 TACGTTGAGAAAATGTGCCCATGCGTTTAAAAGGATTATCGAGCTTCGTCTCAATGAGGA 426
Query 421 AGAAGCAGGAAGATTGAGGCACTTTATCGATCAGCCTGCCTATGTGGATCTGCATTGGGG 480
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 427 AGAAGCAGGAAGATTGAGGCACTTTATCGACCAGCCTGCCTATGTGGATCTGCACTGGGG 486
Query 481 AATGTTTGTGCCTGCTATTAAGGGGCAGGGCACAGAGGAGCAGCAGAAGAAGTGGTTGTC 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 487 AATGTTTGTGCCTGCTATTAAGGGGCAGGGTACAGAGGAGCAGCAGAAGAAGTGGTTGTC 546
Query 541 GCTGGCGAATAAGATGCAGATTATTGGGTGTTATGCACAGACTGAGCTTGGTCATGGCTC 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GCTGGCCAATAAGATGCAGATTATTGGGTGTTATGCACAGACTGAGCTTGGTCATGGCTC 606
Query 601 AAATGTTCAAGGACTTGAGACAACTGCCACATTTGATCCCAAGACTGATGAGTTTGTAAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 AAATGTTCAAGGACTTGAGACAACTGCCACATTTGATCCCAAGACTGATGAGTTTGTAAT 666
Query 661 TCATACTCCAACTCAGACTGCATCCAAATGGTGGCCTGGTGGTTTGGGAAAAGTTTCTAC 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCACACTCCAACTCAGACTGCATCCAAATGGTGGCCTGGTGGTTTGGGAAAAGTTTCTAC 726
Query 721 CCATGCTGTTGTTTACGCTCGTCTCATAACTAACGGAAAAGACTATGGTATCCATGGATT 780
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 727 TCATGCTGTTGTTTACGCTCGTCTCATAACTAACGGAAAAGACTACGGTATCCATGGATT 786
Query 781 CATCGTGCAACTGCGCAGCTTAGAAGACCATTCTCCTCTTCCGAATATAACTGTTGGTGA 840
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 787 CATCGTGCAACTGCGAAGCTTAGAAGATCATTCTCCTCTTCCGAATATAACTGTTGGTGA 846
Query 841 TATCGGGACGAAGATGGGAAATGGAGCATATAATTCAATGGACAACGGGTTTCTTATGTT 900
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 TATCGGGACAAAGATGGGAAATGGAGCATATAATTCAATGGACAACGGGTTTCTTATGTT 906
Query 901 TGATCATGTTCGCATTCCTAGAGATCAAATGCTCATGAGGCTGTCAAAAGTTACAAGGGA 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 907 TGATCATGTTCGCATTCCTAGAGATCAAATGCTCATGAGGCTGTCAAAAGTTACAAGAGA 966
Query 961 AGGAAAATATGTTCCATCGGATGTTCCAAAGCAGCTGGTATATGGTACTATGGTGTATGT 1020
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 AGGAGAATATGTTCCATCGGATGTTCCAAAGCAGCTGGTATATGGTACTATGGTGTATGT 1026
Query 1021 GAGACAAGCAATTGTGGCAGATGCTTCCATTGCACTATCTCGAGCAGTTTGCATAGCTAC 1080
||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 1027 GAGACAAACAATTGTGGCTGATGCTTCCAATGCACTATCTCGAGCAGTTTGCATAGCTAC 1086
Query 1081 AAGGTACAGCGCAGTGCGGAGGCAGTTTGGCGCACATAATGGTGGCATTGAGACACAGGT 1140
||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1087 AAGATACAGTGCAGTGCGGAGGCAATTTGGCGCACATAATGGTGGCATTGAGACACAGGT 1146
Query 1141 GATTGATTATAAAACTCAGCAGAACAGGCTATTTCCTCTGCTAGCATCTGCATATGCATT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GATTGATTATAAAACTCAGCAGAACAGGCTATTTCCTCTGCTAGCATCTGCATATGCATT 1206
Query 1201 TCGATTTGTTGGAGAGTGGCTAAAATGGCTGTACACGGATGTAACTGAAAGACTGGCGGC 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 TCGATTTGTTGGAGAGTGGCTAAAATGGCTGTACACGGATGTAACTGAAAGACTGGCGGC 1266
Query 1261 TAGTGATTTCGCAACTTTGCCTGAGGCTCATGCATGCACTGCAGGGTTGAAGTCTCTCAC 1320
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1267 TAGTGATTTCGCAACTTTGCCTGAGGCTCATGCATGCACTGCAGGATTGAAGTCTCTCAC 1326
Query 1321 CACCACAGCCACTGCGGATGCCATTGAAGAATGTCGTAAGTTATGTGGTGGACACGGCTA 1380
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||
Sbjct 1327 CACCACAGCCACTGCGGATGGCATTGAAGAATGTCGTAAGTTATGTGGTGGACATGGATA 1386
Query 1381 CTTGTGGTGCAGTGGGCTCCCCGAGCTGTTTGCTGTATATGTTCCTGCCTGCACATACGA 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 CTTGTGGTGCAGTGGGCTCCCCGAGCTGTTTGCTGTATATGTTCCTGCCTGCACATACGA 1446
Query 1441 AGGAGACAATGTTGTGCTGCAATTACAGGTTGCTCGATTCCTCATGAAGACAGTCGCCCA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 AGGAGACAATGTTGTGCTGCAATTACAGGTTGCTCGATTCCTCATGAAGACAGTCGCCCA 1506
Query 1501 GCTGGGATCTGGAAAGGTTCCTGTTGGCACAACTGCTTATATGGGCCGGGCCGCACATCT 1560
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1507 GCTGGGATCTGGAAAGGTTCCTGTTGGCACAACTGCTTATATGGGCCGGGCAGCACATCT 1566
Query 1561 TTTGCAATGTCGTTCTGGTGTTCAAAAGGCTGAGGATTGGTTAAACCCTGATGCGGTACT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1567 TTTGCAATGTCGTTCTGGTGTTCAAAAGGCTGAGGATTGGTTAAACCCTGATGTTGTACT 1626
Query 1621 GGAAGCTTTCGAAGCTAGGGCTCTGAGAATGGCTGTTACTTGTGCCAAAAATCTCAGCAA 1680
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1627 GGAAGCTTTCGAAGCTAGGGCTCTCAGAATGGCTGTTACGTGTGCCAAAAATCTCAGCAA 1686
Query 1681 GTTTGAGAATCAGGAACAAGGATTCCAAGAGCTCTTGGCTGATTTGGTTGAGGCCGCTAT 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 GTTTGAGAATCAGGAACAAGGATTCCAAGAGCTCTTGGCTGATTTGGTTGAGGCCGCTAT 1746
Query 1741 TGCTCATTGCCAATTGATTGTTGTTTCCAAGTTCATAGCGAAACTAGAGCAGGACATAGG 1800
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1747 TGCTCATTGCCAATTGATTGTTGTTTCCAAGTTCATAGCGAAACTGGAGCAAGACATAGG 1806
Query 1801 AGGCAAAGGAGTGAAGAAACAGCTGAATAATCTGTGTTACATTTACGCGCTTTATCTCCT 1860
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1807 TGGCAAAGGAGTGAAGAAACAGCTGAATAATCTGTGTTACATTTATGCTCTTTATCTCCT 1866
Query 1861 TCACAAACATCTCGGTGATTTCCTCTCCACTAACTCCATCACTCCCAAACAAGCCTCTCT 1920
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1867 CCACAAACATCTCGGCGATTTCCTCTCCACTAACTGCATCACTCCCAAACAAGCCTCTCT 1926
Query 1921 TGCTAACGACCAGCTCCGTTCCTTATACTCTCAGGTCCGTCCTAATGCGGTTGCACTTGT 1980
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1927 TGCTAACGACCAGCTCCGTTCCTTATACACTCAGGTCCGGCCTAATGCGGTTGCACTTGT 1986
Query 1981 GGACGCCTTCAATTACACAGACCATTACTTGAACTCGGTGCTGGGCCGTTATGACGGTAA 2040
|||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||
Sbjct 1987 GGACGCCTTCAATTACACCGACCATTACTTGAACTCGGTTCTTGGCCGTTACGACGGTAA 2046
Query 2041 TGTGTACCCAAAGCTCTTTGAGGAAGCGTGGAAGGATCCATTGAACGACTCGGTGGTTCC 2100
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2047 TGTGTACCCAAAGCTCTTTGAGGAAGCGTTGAAGGATCCATTGAACGACTCGGTGGTTCC 2106
Query 2101 TGATGGGTACCATGAATACCTTCGACCTGTGCTTAAGCAGCAACTTCGTACCGCTAGGCT 2160
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2107 TGATGGGTACCAAGAATACCTTCGACCTGTGCTTCAGCAGCAACTTCGTACCGCTAGGCT 2166
Query 2161 CTGAAGAGTTTTCTT-GCTTGATACTCGATATGGTTAATCACATTTGACTTGcttc-t-- 2216
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
Sbjct 2167 CTGAAGAGTTTTCTTTGCTTGATACTCGATATGGTTAATCACATTAGACTTGCTTCGTCC 2226
Query 2217 t-cttcttc-t-t-ct-C--------GCTTTGAATAAAGTT-GCAGTTTAAAAACTGGCG 2262
| ||||||| | | || | ||||||||||| || ||||||||||||||||||
Sbjct 2227 TTCTTCTTCGTCTTCTTCTTCTTCTCGCTTTGAATAAT-TTCGCAGTTTAAAAACTGGCG 2285
Query 2263 ATGCCCTTATTTATATGTAGCAATGTAATAGTTAATGTACGGTCGTCTTATGGCGGCATG 2322
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 2286 ATGCCCTTATTTATATGTAGCAATGTAATAGTTAATGTACGATCGTCATATGGCGGAATT 2345
Query 2323 TTAGTACTATTTTTCGTATTCAATGCAACATTAATAAAATTGATCGTTTTTACTTTCTAC 2382
||||||||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct 2346 TTAGTACTATTTTTCGTTTTCAATGCAACATTAATACAATTGATCGTTT---CT----AC 2398
Query 2383 TCTGAGAAGGATAC-----ATATTTGTAATCTTCGTAT 2415
||||||||||||| |||||||||||||||||||
Sbjct 2399 TCTGAGAAGGATATGTGGGATATTTGTAATCTTCGTAT 2436
> AT2G35690.1 | Symbols: ACX5 | acyl-CoA oxidase 5 | chr2:14999754-15003066
FORWARD LENGTH=2377
Length=2377
Score = 1869 bits (1012), Expect = 0.0
Identities = 1680/2001 (84%), Gaps = 51/2001 (3%)
Strand=Plus/Plus
Query 164 GAATCAATGGAAG-GAGTTGATCACCTTGCTGATGAGAGGAACAAGGCGGAGTTCGACGT 222
||| |||||| || |||||||||||||||| |||||||||||||| || |||||| ||||
Sbjct 204 GAA-CAATGG-AGAGAGTTGATCACCTTGCCGATGAGAGGAACAAAGCAGAGTTCAACGT 261
Query 223 CGAGGAGATGAAGATCGTCTGGGCTGGTTCCCGCCACGCTTTTGAGGTTTCCGATCGAAT 282
||| || ||||||||||||||||| ||||||||||||||||| || ||||| |||| |
Sbjct 262 CGACGATATGAAGATCGTCTGGGCCGGTTCCCGCCACGCTTTCGATGTTTCAAATCGTA- 320
Query 283 TG-CCCGTCTCGTCGCCAGCGATCCGGTATTTGAGAAAAGCAATAGAGCTCG-GTTGAGT 340
|| | || |||||||| | |||||||| |||||||||||||| |||||| | | |||||
Sbjct 321 TGTCTCGCCTCGTCGCTAATGATCCGGTCTTTGAGAAAAGCAAAAGAGCT-GTGATGAGT 379
Query 341 AGGAAGGAGCTGTTTAAGAGTACGTTGA-GAAAATGTGCTCATGCCTT-TAAGAGGATTA 398
||||| ||| |||| |||| ||||||| ||||| ||| ||| | ||| ||| |||||
Sbjct 380 AGGAAAGAGTTGTTCAAGAACACGTTGAGGAAAA-GTGTTCACG-CTTGGAAGTTGATTA 437
Query 399 TCGAGCTTCGTCTCACTGAGGAAGAAGCA-GGAAGATTGAGGCA-CTTT-ATCGATCAGC 455
||||||||||||| | || || |||| | || ||||| | | |||| || ||||| |
Sbjct 438 ACGAGCTTCGTCTCTCAGATGAGGAAGGACTCAA-ATTGA-G-ATCTTTCATGGATCAAC 494
Query 456 C-TGCCTATGTGGATCTGCATTGGGGAATGTTTGTGCCTGCTATTAAGGGGCAGGGCACA 514
| || | | ||||||||||||||||||||||||||||||| ||||| || || ||||||
Sbjct 495 CAGGCTTCT-TGGATCTGCATTGGGGAATGTTTGTGCCTGCAATTAAAGGACAAGGCACA 553
Query 515 GAGGAGCAGC-AGAAGAAGTGGTTGTCGCTGGCGAATAAGATGCAGATTATTGGGTGTTA 573
||| | || | | || ||||||||||| | || | |||||||||||| ||||| |||||
Sbjct 554 GAGCAACAACAACAA-AAGTGGTTGTCTTTAGCTACTAAGATGCAGATAATTGGATGTTA 612
Query 574 TGCACAGACTGAGCTTGGTCATGGCTCAAATGTTCAAGGACTTGAGACAACTGCCACATT 633
||| || |||||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct 613 TGCTCAAACTGAGCTTGGTCATGGCTCTAATGTTCAAGGCCTTGAGACAACCGCTACTTT 672
Query 634 TGATCCCAAGACTGATGAGTTTGTAATTCATACTCCAACTCAGAC-TGCATCCAAATGGT 692
|||||| ||||| ||| ||||| | ||||| | |||||||||||| | ||||||||||||
Sbjct 673 TGATCCAAAGACAGATCAGTTTATCATTCACAGTCCAACTCAGACAT-CATCCAAATGGT 731
Query 693 GGCCTGGTGGTTTGGGAAAAGTTTCTACCCATGCTGTTGTTTACGCTCGTCTCATAACTA 752
|||||||||| || |||||||||||||| ||||||||| |||| |||||||| ||||| |
Sbjct 732 GGCCTGGTGGGTTAGGAAAAGTTTCTACTCATGCTGTTATTTATGCTCGTCTAATAACCA 791
Query 753 ACGGAAAAGACTATGGTATCCATGGATTCATCGTGCAACTGCGCAGCTTAGAAGACCATT 812
| || |||||| ||||| | ||||||||||||||||| ||||| || || || || ||||
Sbjct 792 ATGGCAAAGACCATGGTGTACATGGATTCATCGTGCAGCTGCGTAGTTTGGATGATCATT 851
Query 813 CTCCTCTTCCGAATATAACTGTTGGTGATATCGGGACGAAGATGGGAAATGGAGCATATA 872
||||||||||| |||||| |||||||||||||| | |||| | ||||| || |||||||
Sbjct 852 CTCCTCTTCCGGGTATAACCGTTGGTGATATCGGAATGAAGTTTGGAAACGGGGCATATA 911
Query 873 ATTCAATGGACAACGGGTTTCTTATGTTTGATCATGTTCGCATTCCTAGAGATCAAATGC 932
| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 912 ACTCAATGGACAATGGTTTTCTTATGTTTGATCATTTTCGCATTCCTAGAGATCAAATGC 971
Query 933 TCATGAGGCTGTCAAAAGTTACAAGGGAAGGAAAATATGTTCCATCGGATGTTCCAAAGC 992
||||||| ||||||||||||||||| |||||||||||||| |||| |||||||||| ||
Sbjct 972 TCATGAGACTGTCAAAAGTTACAAGAGAAGGAAAATATGTAGCATCAGATGTTCCAAGGC 1031
Query 993 AGCTGGTATATGGTACTATGGTGTATGTGAGACAAG-CAATTGTGGCAGATGCTTCCATT 1051
| |||| ||||||||||||||||||||||||| || | |||||| || |||||||||
Sbjct 1032 AATTGGTGTATGGTACTATGGTGTATGTGAGAC-AGTCTATTGTGTCAAATGCTTCCACC 1090
Query 1052 GCACTATCTCGAGCAGTTTGCATAGCTACAAGGTACAGCGCAGTGCGGAGGCAGTTTGGC 1111
|| || |||| ||||||||||| ||||| |||||||| || || || ||||||||||||
Sbjct 1091 GCGCTGGCTCGGGCAGTTTGCATTGCTACTAGGTACAGTGCTGTTCGAAGGCAGTTTGGC 1150
Query 1112 GCACATAATGGTGGCATTGAGACACAGGTGATTGATTATAAAACTCAGCAGAACAGGCTA 1171
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1151 TCACATGATGGTGGCATTGAGACACAGGTGATTAATTATAAAACTCAGCAGAACAGGTTG 1210
Query 1172 TTTCCTCTGCTAGCATCTGCATATGCATTTCGATTTGTTGGAGAGTGGCTAAAATGGCTG 1231
||||||||||| |||||||||||||||||||| ||||| || || ||||| || |||||
Sbjct 1211 TTTCCTCTGCTGGCATCTGCATATGCATTTCGGTTTGTAGGGGAATGGCTGAAGTGGCTC 1270
Query 1232 TACACGGATGTAACTGAAAGACTGGCGGCTAGTGATTTCGCAACTTTGCCTGAGGCTCAT 1291
||||| |||||||| ||||||| | ||| |||||||||||||| |||||||| ||||||
Sbjct 1271 TACACTGATGTAACAAAAAGACTAGAGGCCAGTGATTTCGCAACATTGCCTGAAGCTCAT 1330
Query 1292 GCATGCACTGCAGGGTTGAAGTCTCTCACCACCACAGCCA-CTGCGGATGCCATTGAAGA 1350
||||||||||| || ||||||||| | || ||| |||||| || | |||| ||||||||
Sbjct 1331 GCATGCACTGCTGGATTGAAGTCTATGACTACCTCAGCCACCT-CTGATGGGATTGAAGA 1389
Query 1351 ATGTCGTAAGTTATGTGGTGGACACGGCTACTTGTGGTGCAGTGGGCTCCCCGAGCTGTT 1410
|||||||||||||||||||||||| || ||||||||||| |||||||| || || ||||
Sbjct 1390 ATGTCGTAAGTTATGTGGTGGACATGGATACTTGTGGTGTAGTGGGCTTCCTGAATTGTT 1449
Query 1411 TGCTGTATATGTTCCTGCCTGCACATACGAAGGAGACAATGTTGTGCTGCAATTACAGGT 1470
|||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||
Sbjct 1450 TGCTGTATATGTTCCTGCTTGCACATACGAGGGAGACAATGTTGTGTTGCAGTTACAGGT 1509
Query 1471 TGCTCGATTCCTCATGAAGACAGTCGCCCAGCTGGGATCTGGAAAGGTTCCTGT-TGGCA 1529
|||| |||| || ||||||||||| | ||| |||| |||||||||| |||| | ||| |
Sbjct 1510 TGCTAGATTTCTGATGAAGACAGTTTCACAGTTGGGTTCTGGAAAGGCTCCT-TCTGGGA 1568
Query 1530 CAACTGCTTATATGGGCCGGGCCGCACATCTTTTGCAATGTC-GTTCTGGTGTTCAAAAG 1588
||||||||||||||||| | || ||| ||||||||||| | |||| || |||| |||
Sbjct 1569 CAACTGCTTATATGGGCAGAGCAAAACACCTTTTGCAATG-CAGTTCCGGAGTTCGAAAT 1627
Query 1589 GCTGAGG-ATTGGTTAAACCCTGATGCGGTACTGGAAGCTTTCGAAGCTAGGGCTCTGAG 1647
||| ||| | ||||||||||||| | ||| |||||||||| ||||| || ||| ||||
Sbjct 1628 GCT-AGGGACTGGTTAAACCCTGGTATGGTGTTGGAAGCTTTTGAAGCAAGAGCTTTGAG 1686
Query 1648 AATGGCTGTTACTTGTGCCAAAAATCTCAGCAAGTTTGAGAATCAGGAACAAGGATTC-C 1706
|||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||| |
Sbjct 1687 AATGGCTGTTACTTGTGCTAACAATCTAAGCAAGTTTGAGAATCAAGAACAAGGATTCTC 1746
Query 1707 AAGAGCTCTTGGCTGAT-TTGGTTGAGGCCGCTATTGCTCATTGCCAATTGATTGTTGTT 1765
| || |||||||||||| ||| ||||||| |||| |||||||||||| || |||||||||
Sbjct 1747 A-GAACTCTTGGCTGATCTTG-TTGAGGCTGCTACTGCTCATTGCCAGTTAATTGTTGTT 1804
Query 1766 TCCAAGTTCATAGCGAAACTAGAGCAGGACATAG-GA-GGCAAAGGAGTGAAGAAACAGC 1823
|| ||||| ||||| ||| ||||| ||| ||| || || |||||||||||||||||||
Sbjct 1805 TCTAAGTTTATAGCCAAAGTAGAG--GGAGATATTGAAGGAAAAGGAGTGAAGAAACAGC 1862
Query 1824 TGAATAATCTGTGTTACATTTACGCGCTTTATCTCCTTCACAAACATCTCGGTGATTTCC 1883
| || ||||| || ||||| ||||| || ||||||||||||||||| || ||||||||||
Sbjct 1863 TCAAGAATCTATGCTACATCTACGCACTCTATCTCCTTCACAAACACCTTGGTGATTTCC 1922
Query 1884 TCTCCACTAACTCCATCACTCCCAAACAAGCCTCTCTTGCTAACGACCAGCTCCGTTC-C 1942
|| || ||||| | ||||| |||||||||| ||||| ||| | ||||| || || |
Sbjct 1923 TCAGTACAAACTCTGTTACTCCTGAACAAGCCTCACTTGCGAACCAGCAGCTTCGATCAC 1982
Query 1943 TTATACTCTCAGGTCCGTCCTAATGCGGTTGCACTTGTGGACGCCTTCAATTACACAGAC 2002
| ||||||||||| || || || || || || || |||||||||||| | ||||| |||
Sbjct 1983 TC-TACTCTCAGGTTCGACCAAACGCAGTGGCCCTAGTGGACGCCTTCGACTACACGGAC 2041
Query 2003 CATTA-CTTGAACTCGGTGCTG-GGCCGTTATGACGGTAATGTGTACCCAAAGCTCTTT- 2059
|| || |||| ||| || || ||||| |||||||| || || || |||||||| |||
Sbjct 2042 CAGTATCTTGG-CTCTGT-CTTAGGCCGCTATGACGGAAACGTTTATCCAAAGCT-TTTC 2098
Query 2060 GAGGAAGCGTGGAAGGATCCATTGAACGACTCGGTGGTTCCTGATGGGTACCATGAATAC 2119
|||||||||| |||||||||| | || ||||||||||||||||| || |||| ||| |||
Sbjct 2099 GAGGAAGCGTTGAAGGATCCACTCAATGACTCGGTGGTTCCTGACGGCTACCGTGAGTAC 2158
Query 2120 CTTCGACCTGT-GCTTAAGCA 2139
| ||||| || | |||||||
Sbjct 2159 ATCCGACC-GTTGATTAAGCA 2178
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119929102005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5