BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493346
Length=2511
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15430.1 | Symbols: | ERD (early-responsive to dehydration ... 4023 0.0
AT3G21620.1 | Symbols: | ERD (early-responsive to dehydration ... 1539 0.0
> AT4G15430.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr4:8827876-8831504 FORWARD LENGTH=2588
Length=2588
Score = 4023 bits (2178), Expect = 0.0
Identities = 2408/2517 (96%), Gaps = 23/2517 (1%)
Strand=Plus/Plus
Query 1 CAATAAAGCTTTGTCTTTTACCTCTTTTAAAAGGTAGAAGGAAGAGTAGTTA-TATCTTC 59
|||||||||||||||||||| ||||| ||||||||||||||| || |||||||
Sbjct 87 CAATAAAGCTTTGTCTTTTA--GCTTTT-----CTAGAAGGAAGAGTAG-TAGTATCTTC 138
Query 60 TTCTTGACACTCTCATGGCTACAATAAACGATATTGGAGTAGCAGCAGCAATCAATATAG 119
|| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 TTTTTCACAGTCTCATGGCTACAATAAACGATATTGGAGTAGCAGCAGCAATCAATATAG 198
Query 120 TCACAGCATTAGCTTTTCTCTTAGCTTTTGCTATATTCAGGATTCAACCAGTAAATGACA 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 TCACAGCATTTGCTTTTCTCTTAGCTTTTGCTATATTCAGGATTCAACCAGTAAATGACA 258
Query 180 GAGTCTATTTCCCTAAATGGTATCTCAAGGGCTTAAGAAGTAGTTCTATACAAACTGGTG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 GAGTCTATTTCCCTAAATGGTATCTCAAGGGCTTAAGAAGTAGTTCTATACAAACTGGTG 318
Query 240 GCTTTGGTAGCAAATTCATCAACTTGGACTTCAGATCCTATATTCGTTTCCTTAATTGGA 299
|||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 319 GCTTTGGTAGCAAATTCATCAATTTGGACTTCAGGTCCTATATTCGTTTCCTCAATTGGA 378
Query 300 TGCCTGAAGCACTTAAAATGCCAGAACCTGAGCTCGTCGATCACGCTGGACTCGATTCTG 359
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 379 TGCCTGAAGCACTTAAAATGCCAGAACCGGAACTCGTCGATCACGCTGGACTCGATTCTG 438
Query 360 TTGTCTACTTGAGGATCTACTTACTCGGGCTCAAGATCTTTTTCCCTATAGCTTGTGTTG 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TTGTCTACTTGAGGATCTACTTACTCGGGCTCAAGATCTTTTTCCCTATAGCTTGTGTTG 498
Query 420 CTTTTACGGCAATGGTTCCTGTTAATTGGACAAACAAGGGATTGGATCGGTTAAGACATT 479
||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 499 CTTTTACAACAATGGTTCCTGTTAATTGGACAAACAAAGGATTGGATCGGTTAAGGCATT 558
Query 480 CTAATATAAGTTTCAGTGATATTGATAAACTCTCTTTATCAAATATACCAAATGGCTCAC 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 559 CCAATATAAGTTTCAGTGATATTGATAAACTCTCTTTATCAAATATACCAAATGGGTCAC 618
Query 540 CTAGATTTTGGGTGCATTTGTGTATGGCTTATGCTATCACTTTCTGGACATGCTTTATCC 599
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct 619 CTAGATTTTGGGTGCATTTGTGTATGGCTTATGCGATTACCTTCTGGACATGCTTTATCC 678
Query 600 TGAAAAGAGAGTACCAGAATATAGCTTTAATGAGACTACAGTTTCTTGCAAATGATCAAA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 TGAAAAGAGAGTACCAGAATATAGCTTTAATGAGACTACAGTTTCTTGCAAATGATCAAA 738
Query 660 GGAGACCTAACCAGTTCACTGTGCTGGTAAGAAACATTCCTTCAGATCCTCATGAATCAA 719
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 739 GGAGACCTAACCAGTTCACTGTACTGGTAAGAAACATTCCTGCAGATCCTCATGAATCAA 798
Query 720 TATGTGAACTTGTTGAACATTTCTTCAAAGTCAACCATCCAGATCACTACCTCACTTTCC 779
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 799 TATGTGAACTTGTTGAACATTTCTTCAAAGTCAATCATCCAGATCACTATCTCACTTTCC 858
Query 780 AGGCAGTCCACGATGCAACAAAACTCTCCGAATTGGTTCTGACGAGGAATCAAATGCAGA 839
||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 859 AGGCAGTCCACGATGCAACCAAACTCTCGGAATTGGTTCTGACGAGGAAACAAATGCAGA 918
Query 840 ATCTGCTTGATTACAATATAAACAAACACATGAGGAATCAATCTAACAGGCCAGTAATAA 899
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 919 ACCTGCTTGATTACAATATAAACAAACACATGAGGAATCTATCTAACAGGCCAGTAATAA 978
Query 900 AGATGGGATTTCTTGGCTGCTGTGGTGAAGAAGCTGATGGAATCAAATATTACACGTCCG 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 979 AGATGGGATTTCTTGGCTGCTGTGGTGAAGAAGCTGATGGAATCAAATATTACACGTCCG 1038
Query 960 TCGTCGAGGGTCTAACAAGAGAAATAGCTGAGGAAAAACAGAGGTTAAGGACCGGCACAA 1019
|||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 1039 TCGTTGAGGGTCTAACAAGAGAAATATCTGAGGAGAAACAGAGGTTAAGGACCGGCACAA 1098
Query 1020 AGTCCATAGTGCCTGCGGCTTTTGTATCTTTCAAGAGCCGTTGGGGAGCAGCGGTTTGTG 1079
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 AGTCCATAGTGCCTGCAGCTTTTGTATCTTTCAAGAGCCGTTGGGGAGCAGCGGTTTGTG 1158
Query 1080 CTCAAACTCAACAAACAAGAAACCCAACAGAATGGCTAACCGAGTGGGCTGCAGAGCCAC 1139
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1159 CTCAAACTCAACAGACAAGAAACCCAACAGAATGGCTAACTGAGTGGGCTGCAGAGCCAC 1218
Query 1140 GTGACATCTACTATGACAATCTGGCATTGCCATATGTCGACCTTAAGATAAGGCGGCTCA 1199
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 1219 GTGACATCTACTATGACAATCTGGCATTGCCATATGTAGACCTTAAGATAAGGAGGCTCA 1278
Query 1200 TAGTCGGCGTCGCATACTTCTTCCTCACCTTCTTCTTCATGATACCAATAGCATTTGTAC 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 TAGTCGGCGTCGCATACTTCTTCCTCACCTTCTTCTTCATGATACCAATAGCATTTGTAC 1338
Query 1260 AGTCACTTGCCAACATCGAAGGCATAGAGAAGGCTTTTCCTTTCTTGAAGCCCCTTATAG 1319
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339 AGTCACTCGCCAACATCGAAGGCATAGAGAAGGCTTTTCCTTTCTTGAAGCCCCTTATAG 1398
Query 1320 AAGTGAAATTGTTAAAGTCGATCATCCAAGGTTTCCTTCCCGGAATCGCTTTGAAGATCT 1379
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1399 AAGTGAAATTGTTAAAGTCGATCATCCAAGGTTTCCTTCCCGGAATCGCCTTGAAGATCT 1458
Query 1380 TCCTCCTTTTCCTCCCAAGAATACTGATGCAAATGTCCAAATTCGAAGGTTTTGTCAGCA 1439
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 1459 TCCTCCTTTTCCTCCCAAGAATACTCATGCAGATGTCCAAATTTGAAGGTTTTGTCAGCA 1518
Query 1440 CATCCTCATTAGAAAGAAGAGCCGCAACTAGATTCTACATGTTCCAGTTCATCAATGTTT 1499
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1519 CATCCTCATTAGAAAGAAGAGCTGCAACTAGATTCTACATGTTCCAATTCATCAATGTTT 1578
Query 1500 TCCTCGGAAGCATAGTCACCGGGACTGCGTTTCAACAGCTCAACAGTTTCCTTAACCAGT 1559
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1579 TCCTTGGAAGCATAGTCACCGGGACTGCGTTTCAACAGCTCAACAGTTTCCTTAACCAGT 1638
Query 1560 CTGCAAACGATATTCCAAAAACAATTGGTGTCTCGATTCCAATGAAAGCGACCTTCTTTA 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1639 CTGCAAACGATATTCCAAAAACAATTGGTGTCTCGATTCCAATGAAAGCGACCTTCTTTA 1698
Query 1620 TAACATACATAATGGTTGATGGATGGGCTGGTGTTGCTGGGGAGATATTGAGGTTGAAGC 1679
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1699 TAACATACATAATGGTGGATGGATGGGCTGGTGTTGCTGGTGAGATATTGAGGTTGAAGC 1758
Query 1680 CACTCATAATCTATCATCTAAAGAACTCCTTCCTCGTGAGAACCGAGAAAGATAGGGAAG 1739
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1759 CACTCATAATCTATCATCTAAAGAACTCCTTCCTCGTGAGAACCGAAAAAGATAGGGAAG 1818
Query 1740 AAGCAACTGATCCTGGAACCATAGGATTCAACACTGGTGAGCCTCAAATACAACTCTACT 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1819 AAGCAACTGATCCTGGAACCATAGGATTCAACACTGGTGAGCCTCAAATACAACTCTACT 1878
Query 1800 TCCTTCTTGGTCTTGTTTACGCAGCAGTTAGCCCCATCCTTCTCCCCTTTATCCTCGTCT 1859
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1879 TCCTTCTTGGTCTTGTTTACGCAGCAGTTAGCCCCATCCTTCTCCCTTTTATCCTCGTCT 1938
Query 1860 TCTTCGGCCTGGCTTTCGTAGTGTACCGTCATCAGGTTATAAATGTGTATAATCAAAAGT 1919
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1939 TCTTCGGCCTGGCTTTTGTAGTGTACCGTCATCAGGTTATAAATGTGTATAACCAAAAGT 1998
Query 1920 ATGAAAGTGCAGGGAAGTTCTGGCCTGACGTTCACAGGCGTGTTGTGACCGCACTGGTTG 1979
|||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1999 ATGAGAGCGCAGGGAAGTTCTGGCCTGACGTTCACAGGCGTGTTGTGACCGCATTGGTTG 2058
Query 1980 TTTCGCAGCTGCTCTTGATGGGTCTTCTAAGCACCAAACACGCTTCTAAGTCCACTCCAT 2039
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2059 TTTCACAGCTGCTCTTGATGGGTCTTCTAAGCACCAAACACGCTTCTAAGTCCACTCC-T 2117
Query 2040 TT-CTGCTTGTGCTTCCGCTGCTGACCATCGGGTTCCACAAGCACTGCAAAAATCGTTAC 2098
|| ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2118 TTGCTGCTTGTGCTTCCGTTGCTGACCATCGGGTTCCACAAACACTGCAAAAACCGTTAC 2177
Query 2099 CAACCTGCTTTTGTAACATACCCGTTACAGCAGGAAGCTATGATCAAAGATACACTGGAC 2158
|||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2178 CAACCTGCCTTTGTCACATACCCGTTACAGCAGGAAGCCATGATCAAAGATACACTGGAC 2237
Query 2159 CGCATACGTGAGCCTAACTTTAACCTCAAGGCTTTCCTTCGAGATGCGTACGCCCACCCA 2218
|| |||||||| || ||||| |||||||| |||||||||||||| || |||||||||||
Sbjct 2238 CGTATACGTGAACCAAACTTAAACCTCAAAGCTTTCCTTCGAGACGCCTACGCCCACCCG 2297
Query 2219 GAGTTCAGGGTTGGAGAAGATCCAGAGCCCGAGGAGAAGCTGGAGTCTGATATGTCACCA 2278
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2298 GAGTTCAGGGTTGGAGAAGATCCAGAGCCCGAGGAGAAGCTGGAGTCTGATATGTCACCT 2357
Query 2279 CCGGAATTAGTGGCCACAAAGCGT-GGCTCATGGAGGAACACTCCTCTGCCTAGCAAACA 2337
||||| ||||||||||| |||||| || |||||||||||||||||| ||||||||||| |
Sbjct 2358 CCGGATTTAGTGGCCACTAAGCGTTGG-TCATGGAGGAACACTCCTTTGCCTAGCAAAGA 2416
Query 2338 AAGCTGCCGTGATATACCCTAATCCTTTGGCTCTGTTCTACCTTAAATGGTGATTCTTTT 2397
||||||||||| |||||||||||||| | |||||||||||||| || ||||||||||||
Sbjct 2417 TAGCTGCCGTGAAATACCCTAATCCTT-G-CTCTGTTCTACCTTTAACGGTGATTCTTTT 2474
Query 2398 ATATTCTTAAACAAGTTTTCCCCTCAGTAGAAGAAATGTACATATA--CGATTGTATTAT 2455
||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||||||||
Sbjct 2475 ATATTCTTACACAAGTTTTCCTCTCATTAGAAGAAATGTACATATATACGATTGTATTAT 2534
Query 2456 ATGCAAGaaaaagaaaaaaaaaaaCATTAG-AAAAGCATACTAGAAGTTACTGTTAG 2511
|||||||||||| |||| | |||| | |||||||||| ||||||| |||||||
Sbjct 2535 ATGCAAGAAAAA-AAAATAC----CATTTGGAAAAGCATACGAGAAGTTTCTGTTAG 2586
> AT3G21620.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr3:7610958-7614461 REVERSE LENGTH=2544
Length=2544
Score = 1539 bits (833), Expect = 0.0
Identities = 1721/2139 (80%), Gaps = 103/2139 (5%)
Strand=Plus/Plus
Query 72 TCATGGCTACAATAAACGATATTGGAGTAGCAGCAGCAATCAATATAGTCACAGCATTAG 131
||||||| ||| ||| |||||| ||||| |||||| | |||||||| | || ||||| |
Sbjct 186 TCATGGCGACACTAACCGATATCGGAGTCGCAGCAACGATCAATATTCTAACCGCATTTG 245
Query 132 CTTTTC-TC-TTAGCTTTTGCTATA-TTCAGGA-TTCAACCAGTAAATGACAGAGTCTAT 187
| |||| || || || ||||| ||| || | || |||||||||| || ||||||||||||
Sbjct 246 C-TTTCTTCATT-GCCTTTGCGATACTT-A-GACTTCAACCAGTTAACGACAGAGTCTAT 301
Query 188 TTCCCTAAATGGTATCTCAAGGGCTTAAGAAGTAGTTCTATACAAACTGGTGGCTTTGGT 247
||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||| |
Sbjct 302 TTCCCTAAATGGTATCTCAAGGGTTTAAGAAGTAGTCCTATAAAAACAGGTGGCTTTGCT 361
Query 248 AGCAAATTCATCAACTTGGACTT-CAGATCCTATATTC-GTTTCCTT-AATTGGATGCCT 304
||||| || |||| ||||| || | |||| || || | | ||| || ||||||||||||
Sbjct 362 AGCAAGTTTGTCAATTTGGATTTTC-GATCTTACAT-CAGATTC-TTGAATTGGATGCCT 418
Query 305 GAAGCACTTAA-AATGCCAGAACCTGAGCTCGTCGATCACGCTGGACTCGATTCTGTTGT 363
|||| || | |||||| || ||||| || | ||||| ||||| | |||||||||||
Sbjct 419 CAAGCT-TTGAGAATGCCTGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGTTGT 477
Query 364 CTA-CTTGAGGATCTACTTACTCGGGCTCAAGATCTTTTTCCCTATAGCTTGTGTTGCTT 422
||| || ||||| |||||||||||| | ||||||||||| |||||||| ||| ||||||
Sbjct 478 CTATCTC-AGGATTTACTTACTCGGGTTGAAGATCTTTTTTCCTATAGCATGTATTGCTT 536
Query 423 TTACGGCAATGGTTCCTGTTAATTGGACAAACAAGG-GATTGGATCGGTTAA-GACATTC 480
| || | |||||| || ||||||||||| ||| | | ||||||| ||||| || || |
Sbjct 537 TCACTGTAATGGTACCGGTTAATTGGACTAACTCGACG-TTGGATCAGTTAAAGA-AT-C 593
Query 481 TAATATAAGTTTCAGTGATATTGATAAACTCTCTTTATCAAATATACCAAATGGCTCA-C 539
||| | ||| ||||||||||||||||||||| |||| |||||||||| ||| ||| |
Sbjct 594 TAAC-T---TTT-AGTGATATTGATAAACTCTCTATATCGAATATACCAACTGGATCATC 648
Query 540 CTAGATTTTGGGTGCATTTGTGTATGGCTTATGCTATCAC-TTTCTGGACATGCTTTATC 598
| || |||||||||||||||||||||||||||| ||| || ||| ||||| |||||| ||
Sbjct 649 C-AGGTTTTGGGTGCATTTGTGTATGGCTTATGTTATTACCTTT-TGGACTTGCTTTGTC 706
Query 599 CTGAAAA-GAGAGTACCAGAATATAGCTTTAATGAGACTACAGTTTCTTGCAAATGATCA 657
|| | || |||||||| || |||| |||| ||||| |||||||||||||| ||| ||
Sbjct 707 CT-ACAACGAGAGTACAAGCATATTGCTTCCATGAGGCTACAGTTTCTTGCTTCTGAGCA 765
Query 658 AAGGAGACCTAACCAGTTCACTGTGCTGGTAAGAAACATTCCTTCAGATCCTCATGAATC 717
||||||||| ||||||| ||||| || ||||| ||||||||| |||||||| |||||||
Sbjct 766 TAGGAGACCTGACCAGTTTACTGTTCTTGTAAGGAACATTCCTCCAGATCCTGATGAATC 825
Query 718 AATATGTGAACTTGTTGAACATTTCTTCAAAGTCAACCATCCAGA-TCACTACCTCACTT 776
| || |||| || ||||| |||||||| || |||||||||||||| | ||||||||||||
Sbjct 826 AGTAAGTGAGCTCGTTGAGCATTTCTTTAAGGTCAACCATCCAGACT-ACTACCTCACTT 884
Query 777 TCCAGGCAGTCCACGATGCAA-CAAAACTCTCCGAATTGGTTCTGACGAGGAATCAAAT- 834
|||||| ||| || | |||| ||| || || ||| |||| | || ||||| | ||||
Sbjct 885 ACCAGGCGGTCTACAACGCAAACAAG-CTGTCGGAACTGGTACAGAAGAGGA-TGAAATT 942
Query 835 GCAGAATCTG-CTTGATTACAAT-ATAAACAAACACA-TGAGGAATCAATCTAACAGGCC 891
||||||| || ||||||||| || | |||||||||| | ||||||| |||||| |||||
Sbjct 943 GCAGAAT-TGGCTTGATTACTATCA-AAACAAACACTCT-AGGAATCCATCTAAAAGGCC 999
Query 892 AGTAATAAAGATGGGATTTC-TTGGCTGCTGTGGTGAAGAAGCTGATGGAATCAAAT-AT 949
|||||||||| || |||| ||||||| || |||||||||| ||||| ||| | | |
Sbjct 1000 TTTAATAAAGATTGG-TTTCCTTGGCTGTTGGGGTGAAGAAGTTGATGCAATTGA-TCAC 1057
Query 950 TACAC-GTCCGTCGTCGAGGGTCTAACAAGAGAAATA-GCTGAGGAAAAACAGAG-GTTA 1006
|||| | ||||||||||||| ||| ||||| | ||| || ||| ||| || |
Sbjct 1058 TACATAGAAAAAA-TCGAGGGTCTAACGAGAAAAATAAG-TGAAGAGAAAGAGACAGT-A 1114
Query 1007 AGGACCGGCACAAAGTC-CATAGTGCCTGCGGCTTTTGTATCTTTCAAGA-GCCGTTGGG 1064
| || | ||||||| || | | || ||||| ||||||||||| ||||| | || ||||||
Sbjct 1115 ATGAGCAGCACAAAATCAC-TCGTACCTGCAGCTTTTGTATCCTTCAAAAAGC-GTTGGG 1172
Query 1065 GAGCAGCGGTTTG-TGCTCAAACTCAACAAACAAGAAACCCAACAGAATGGCTAACCGAG 1123
| || | ||||| | ||||||||||||| | ||||||| ||||| ||||||||||||
Sbjct 1173 GCGCTGTTGTTTGCT-CTCAAACTCAACAGTCTCGAAACCCGACAGAGTGGCTAACCGAG 1231
Query 1124 TGGGCTGCAGAGCCACGTGACATCTACTATGACAATCTGGCATTGCCATATGT-CGACCT 1182
|||||| ||||||| || ||||| |||| |||||||| ||||| |||||||| | | ||
Sbjct 1232 TGGGCTCCAGAGCCGCGAGACATATACTGGGACAATCTAGCATTACCATATGTTC-AGCT 1290
Query 1183 TA-AGATAAGGCGGCTCA-TAGTCGGC-GTCGCATACTTCTTCCTCACCTTCTTCTTCAT 1239
| | || || | || | || | | | || || | |||||||||||| |||||||||||
Sbjct 1291 CACA-ATCCGGAGACT-AGTAATAG-CTGTAGCTTTCTTCTTCCTCACTTTCTTCTTCAT 1347
Query 1240 GATACCAATAGCATTT-GTACAGTCACTTGCCAACATCGAAGGCATAGAGAAGGCTTTTC 1298
||| || ||||| ||| |||||| |||| ||||| ||||||||||| || |||||| |||
Sbjct 1348 GATCCCTATAGC-TTTCGTACAGACACTCGCCAATATCGAAGGCATCGAAAAGGCTGTTC 1406
Query 1299 CTTTCTTGAAGCCCCTTATAGAAGTGAAAT-TGTTAAAGTCGATC-ATCCAAGGTTTCCT 1356
| |||||||| || ||||| ||||||||| ||| |||||| || ||||||||||| ||
Sbjct 1407 CGTTCTTGAAACCGCTTATCGAAGTGAAAACTGT-AAAGTC-ATTTATCCAAGGTTTTCT 1464
Query 1357 TCCCGGAATCGCTTTGAAGATCTTCCTCCTTTTCCTCCCAAGAATACTGATGCAAATGTC 1416
||| || ||||| |||||||| |||||| || |||||||||| ||||| |||| ||||||
Sbjct 1465 TCCGGGTATCGCATTGAAGATATTCCTCATTGTCCTCCCAAGTATACTAATGCTAATGTC 1524
Query 1417 CAAATTCGAAGGTTTTGTCAGCACATCCTCATTAGAAAGAAGA-GCCGCAA-CTAGATTC 1474
|| |||||||| || | |||| ||| ||| |||||||||| | |||| | |||| |
Sbjct 1525 GAAGTTCGAAGGCTTCATAAGCAAATCTTCACTAGAAAGAAGGTGT-GCAAGC-AGATAC 1582
Query 1475 TACATGTTCCAGTTCATCAATGTTTTCCTCGGAAGCATAGTCACCGGGA-CTGCGTTTCA 1533
|||||||||||||||||||| ||||||||| | |||||| || | |||| ||||| ||||
Sbjct 1583 TACATGTTCCAGTTCATCAACGTTTTCCTCTGTAGCATAATCGC-GGGAACTGCGCTTCA 1641
Query 1534 ACAGCTCAACAGTTTCCTTAACCAGTCTGCAAACGATATTCCAAAAACAATTGGTGTCTC 1593
||| || |||| ||||| ||||| ||||||| ||| || || || ||||||||||||||
Sbjct 1642 ACAACTTGACAGCTTCCTAAACCAATCTGCAACCGAAATACCGAAGACAATTGGTGTCTC 1701
Query 1594 GATTCCAATGAAAGCGACCTTCTTTATAACATACATAATGGTTGATGGATGGGCTGGTGT 1653
||| ||||||||||| || |||||||| || ||||||||||| || ||||||||||||||
Sbjct 1702 GATACCAATGAAAGCCACTTTCTTTATCACCTACATAATGGTAGACGGATGGGCTGGTGT 1761
Query 1654 TGCTGGGGAGATATTGAGGTTGAAGCCACTCATAATCTATCATCTAAAGAACTCCTTCCT 1713
|||||| |||||| ||||||| |||||| | ||||| |||||||| ||||||| ||||||
Sbjct 1762 TGCTGGAGAGATACTGAGGTTAAAGCCATTGATAATATATCATCTCAAGAACTTCTTCCT 1821
Query 1714 CGTGAGAACCGAGAAAGATAGGGAAGAAGCAACTG-ATCCTGGAACCATAGGATTCAACA 1772
|||| ||| ||||| || || |||||||||| || |||||||||||||||| ||||| |
Sbjct 1822 TGTGAAAACAGAGAAGGACAGAGAAGAAGCAA-TGGATCCTGGAACCATAGGTTTCAATA 1880
Query 1773 CTGGTGAGCCTCAAATACAACTCTACTTCCTTCTTGGTCTTGTTTACGCAGCAGTTAGCC 1832
||||||| ||||| ||||||||||||||| |||||||||| |||||||| || |||||||
Sbjct 1881 CTGGTGAACCTCAGATACAACTCTACTTCATTCTTGGTCTAGTTTACGCCGCTGTTAGCC 1940
Query 1833 CCATCCTTCTCCCCTTTATCCTCGTCTTCTTCGGCCTG-GCTTTCGTAGTGTACCGTCAT 1891
|||| || || || ||||||||||||||||||| ||| |||| ||| || |||||||||
Sbjct 1941 CCATTCTCCTTCCTTTTATCCTCGTCTTCTTCG-CCTTAGCTTACGTGGTTTACCGTCAT 1999
Query 1892 CAGGTTATAAATGTGTATAATCAAAAGTATGAAAGTGCAGG-GAAGTTCTGGCCTGACGT 1950
||| |||||||||||||||| ||| ||||||| ||||| | | ||||||||| || ||
Sbjct 2000 CAGATTATAAATGTGTATAACCAAGAGTATGAGAGTGCTGCAGC-GTTCTGGCCAGATGT 2058
Query 1951 TCACAGGCGTGTTGTGACCGCACTGGTTGTTTCGCAGCTGCTCTTGATGGGTCTT-CTAA 2009
||| || ||||| |||| |||||| | || || ||||| || |||||||| || || |
Sbjct 2059 TCATAGACGTGTAGTGATTGCACTGATCGTATCTCAGCTTCTTTTGATGGGA-TTGCTTA 2117
Query 2010 GCACCAAACACGCTTCTAAGTCC-ACTCCATTTCTGCTTG-TGCTTCC-GCTGCTGACCA 2066
|||| ||| | ||| || || | |||||||| || || | ||||| | || | ||||
Sbjct 2118 GCACGAAAAAAGCTGCTC-GTTCGACTCCATTGCTT-TTCATACTTCCTG-TGTTAACCA 2174
Query 2067 TCGGGTTCCACAAGCACTG-CAAAAATCGTTACCAACCTGCT-TTTGTAACATACCCGTT 2124
| || |||||||| ||| ||| | |||||||||||| | ||||| |||||||| ||
Sbjct 2175 TTGGATTCCACAAATTCTGTCAAGGA-CGTTACCAACCTA-TATTTGTCACATACCCTTT 2232
Query 2125 ACAGCAGGAAGCTATGATCAAAGATACACTGGACCGCAT 2163
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Sbjct 2233 ACAG--G-ATGCAATGGTTAAAGATACGTTGGAACGCAT 2268
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124614686412
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5