BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493451 Length=1458 Score E Sequences producing significant alignments: (Bits) Value AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid induci... 1906 0.0 AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | ch... 590 2e-167 > AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible 14 | chr4:8347822-8350019 REVERSE LENGTH=1482 Length=1482 Score = 1906 bits (1032), Expect = 0.0 Identities = 1347/1488 (91%), Gaps = 66/1488 (4%) Strand=Plus/Plus Query 2 CAAGAGTTATCgagagagagagaAAACATATTTTGATTTAACAAAAATATAGACAAAGCA 61 |||||||||||||||||||||||||||||||| |||||||| | | |||||||| |||| Sbjct 30 CAAGAGTTATCGAGAGAGAGAGAAAACATATTCTGATTTAAGACATATATAGAC--AGCA 87 Query 62 AGAAGAG--ATGAACCTTAAGGAGACGGAGCTTTGTCTTGGCCTCCCTGGAGGTGGTGAA 119 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 88 AGAAGAGATATGAACCTTAAGGAGACGGAGCTTTGTCTTGGCCTCCCCGGAGGCACTGAA 147 Query 120 ACCGTTGAAAGTCCGTCCAAGTCGGGCGTAGGTAACAAGAGAGGCTTCTCTGAGACTGTT 179 ||||||||||||||| |||||||||| || || ||||||||||||||||| ||||| ||| Sbjct 148 ACCGTTGAAAGTCCGGCCAAGTCGGGTGTTGGGAACAAGAGAGGCTTCTCCGAGACCGTT 207 Query 180 GGTCTCAAACTCAATCTTCAATCTAACAAACAAGGACCTGTGGATCTCAACGTTAATGGA 239 | ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 208 GATCTCAAACTTAATCTTCAATCTAACAAACAAGGACATGTGGATCTCAACACTAATGGA 267 Query 240 GCTCCCAAGGAGAAGACCTTCCTTAAAGACCCTTCTAAGCCTCCTGCTAAAGCACAAGTG 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 GCTCCCAAGGAGAAGACCTTCCTTAAAGACCCTTCTAAGCCTCCTGCTAAAGCACAAGTG 327 Query 300 GTGGGTTGGCCACCGGTGAGGAACTACCGAAAAAATGTTATGGCTAATCAGAAGAGCGGC 359 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 328 GTGGGTTGGCCACCGGTGAGGAACTACCGGAAAAATGTTATGGCTAATCAGAAGAGCGGC 387 Query 360 GAAGCGGAGGAGGCAATGAGTAGTGGTGGAGGAACCGTCGCCTTTGTGAAGGTTTCCATG 419 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 GAAGCAGAGGAGGCAATGAGTAGTGGTGGAGGAACCGTCGCCTTTGTGAAGGTTTCCATG 447 Query 420 GATGGAGCTCCTTATCTTCGGAAGGTTGACCTCAAGATGTACAACAGCTACAAGAATCTC 479 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 448 GATGGAGCTCCTTATCTTCGGAAGGTTGACCTCAAGATGTACACCAGCTACAAGGATCTC 507 Query 480 TCTGATGCCTTGGCCAAAATGTTCAGCTCCTTTACCATGGGGAGTTATGGAGCACAAGGG 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 TCTGATGCCTTGGCCAAAATGTTCAGCTCCTTTACCATGGGGAGTTATGGAGCACAAGGG 567 Query 540 ATGATAGATTTCATGAACGAGAGTAAAGTGATGGATCTGTTGAACAGTTCTGAGTATGTT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 568 ATGATAGATTTCATGAACGAGAGTAAAGTGATGGATCTGTTGAACAGTTCTGAGTATGTT 627 Query 600 CCAAGCTACGAGGACAAAGATGGTGACTGGATGCTCGTTGGTGATGTCCCCTGGCCGATG 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 628 CCAAGCTACGAGGACAAAGATGGTGACTGGATGCTCGTTGGTGATGTCCCCTGGCCGATG 687 Query 660 TTTGTCGAGTCATGCAAACGTTTGCGCATAATGAAAGGATCCGAAGCAATTGGACTTGCT 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 688 TTTGTCGAGTCATGCAAACGTTTGCGCATAATGAAAGGATCCGAAGCAATTGGACTTGCT 747 Query 720 CCAAGAGCGATGGAGAAGTTCAAGAACAGATCATGAACAAACAAAAAAGA------T-T- 771 |||||||| |||||||||||||||||||||||||||||||| |||||||| | | Sbjct 748 CCAAGAGCAATGGAGAAGTTCAAGAACAGATCATGAACAAAAAAAAAAGAGGACAATATG 807 Query 772 --T-G-tttttttt----GGTATTGTTATGATCATATGTGTTTGTAATTTTTAATATTGG 823 | | |||||||| ||||||||||||||||| ||| ||| |||||| |||||||| Sbjct 808 CATTGATTTTTTTTTTTTGGTATTGTTATGATCATGTGT-TTT-TAATTTAAAATATTGG 865 Query 824 AAGTATATAGGAAAATAGAATTGTCTACGAAAACAAATCACTTGAAATATGTCTGTGTTT 883 ||||||||||||||||| |||||| |||||||| |||| |||| |||||||||| | ||| Sbjct 866 AAGTATATAGGAAAATATAATTGTTTACGAAAA-AAATAACTTTAAATATGTCTTTTTTT 924 Query 884 TTGTT---GAAATTAGTCTGTGTTTTTGTTTTCATCTCTTAATTAGTCGAAATCAATTTT 940 || || ||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 925 TTTTTTTTGAAATTAGTCTGTGTTTTTGTTTTCATCTCTTAATTAGTAGAAATCATTTTT 984 Query 941 TAATATGTAATAGTGATAGTAATTCTATAGAGTTCtt-tttttGCTATTTGAAATGCTAA 999 ||||||||||| |||||||||| |||||||||||| | |||||||||||| |||| ||| Sbjct 985 TAATATGTAATTGTGATAGTAAATCTATAGAGTTCGTATTTTTGCTATTTAAAATT-TAA 1043 Query 1000 A-TGCTAACACTATATATAATTTATGATAGGTAAATTTACGTTAAAGTAATTTATCTCCA 1058 | |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1044 AATGCTAATACTATATATAATTTATGATAGGTAAATTTACGTTAAA-TAATTTATCTCCA 1102 Query 1059 CTTTTCTAATGATAACTACTTTATGGtttttttcgtcgttattttctcgtatattttctt 1118 |||||| ||||||||| || ||||| || |||||||||| | |||| ||| Sbjct 1103 CTTTTC---------CTACTTTATTATTCTTTTCCTCTTTATTTTCTCATTTATTGGCTT 1153 Query 1119 tacagattaatatctatatattttaaatttGTAACTATGTTTT-ATGTATCTAAAAACAT 1177 ||||||||| ||| | | | || ||||||||||| |||| |||||||||||||||| Sbjct 1154 TACAGATTA-TAT-T-TG-A----AA-TTTGTAACTAT-TTTTGATGTATCTAAAAACAT 1203 Query 1178 TTCACATAACAATTTCTTAAGAAAAATAAGAAATA-TGTTGGTATATTTTT-GAAAGTAA 1235 ||||||||||||||||||||||||| ||||||| | ||||||||||||||| || ||| Sbjct 1204 TTCACATAACAATTTCTTAAGAAAACTAAGAAA-ACTGTTGGTATATTTTTTGAC--TAA 1260 Query 1236 CAA-G-TTACCATTCAATATTT-Gaaaaaaactaaaatcttcaaaaacaaaacca-ttat 1291 || | || ||| || |||| |||| |||||||||||||| | |||||||| || | Sbjct 1261 -AATGGTTTCCAAA-AAGATTTTGAAACGAACTAAAATCTTCATTA-CAAAACCAATTTT 1317 Query 1292 aaaacctacaaaacCAAttttcatggttttaagttttcttttttctttcCTAATTATGTG 1351 ||||| |||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||| Sbjct 1318 AAAAC-TACAAAACAAATATTCATGGTTTTAAGTTT-CTTTTTTCTTTCCTAGTTACGTG 1375 Query 1352 GGATTAAATCATTAAATTCAGGACCCATGAGAGGCGTAGGGAACAAGAGCATGTGCATGT 1411 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1376 GGAATACGTTATTAAATTCAGGACCCATGAGAGGCGTAGGGAACAAGAGCATGTGCATAT 1435 Query 1412 TCATGGGTCTTTCAAATTCAGTCCATCCCCATT-ATGCTAATGTACCC 1458 |||||||||||||||||||||||||||| | || |||||||||| ||| Sbjct 1436 TCATGGGTCTTTCAAATTCAGTCCATCCTC-TTCATGCTAATGTGCCC 1482 > AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr3:8194679-8197153 FORWARD LENGTH=1258 Length=1258 Score = 590 bits (319), Expect = 2e-167 Identities = 598/726 (82%), Gaps = 46/726 (6%) Strand=Plus/Plus Query 69 ATGAACCTTAAGGAGACGGAGCTTTGTCTTGGCCTCCCTGGAGGTGGTGAAACCGTTGAA 128 |||||||| |||| |||||||| ||||| |||||||| || || | |||| | ||||| Sbjct 105 ATGAACCTCAAGGCCACGGAGCTCTGTCTCGGCCTCCCCGGCGGCGCTGAAGCAGTTGAG 164 Query 129 AGTCCGT-CCAAGTCGGGC-GTAGGTAA-CAAGAGAGGCTTCTCTGAGACTGTTGGTCTC 185 ||||| | |||| || ||| || || || ||||||||||||||| || || |||| |||| Sbjct 165 AGTCC-TGCCAAATC-GGCGGT-GGGAAGCAAGAGAGGCTTCTCCGAAACCGTTGATCTC 221 Query 186 AAACTCAATCTTCAATCTAACAAACAAGGAC-CTGTGGATCTC---AACGTTAATGGAGC 241 | ||||||||||||||||||||| |||| | | || |||||| |||||| || | Sbjct 222 ATGCTCAATCTTCAATCTAACAAAGAAGG-CTCCGTTGATCTCAAAAACGTTTCTGCTGT 280 Query 242 TCCCAAGGAGAAGACCT-TCCTTAAAGACCCTTCTAAGCCTCCTGCTAAAGCACAAGTGG 300 |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| Sbjct 281 TCCCAAGGAGAAGA-CTACCCTTAAAGATCCTTCTAAGCCTCCTGCTAAAGCACAAGTGG 339 Query 301 TGGGTTGGCCACCGGTGAGGAACTAC-CGAA-AAAATGTTATGGCTAATCAGAAGAGC-G 357 |||| |||||||| |||||||||||| ||| || ||| ||| || | ||||||| | | Sbjct 340 TGGGATGGCCACCTGTGAGGAACTACAGGAAGAACATG--ATGACTCAGCAGAAGACCAG 397 Query 358 --GCGAAGCGGAGGAGG-CA--A-TGAGTA------G-----TGGTGGAGGA--A-CC-- 395 | | |||||||||| || | |||| | | |||||||||| | || Sbjct 398 TAGTGGTGCGGAGGAGGCCAGCAGTGAGAAGGCCGGGAACTTTGGTGGAGGAGCAGCCGG 457 Query 396 -GTCGCCTTTGTGAAGGTTTCCATGGATGGAGCTCCTTATCTTCGGAAGGTTGACCTCAA 454 | || ||| |||||||| |||||||| || ||||| ||||| |||| ||||||||||| Sbjct 458 AGCCGGCTTGGTGAAGGTCTCCATGGACGGTGCTCCATATCTGAGGAAAGTTGACCTCAA 517 Query 455 GATGTACAACAGCTACAAGAATCTCTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTTAC 514 ||||||||| |||||| || |||| |||||||| |||||||||||||||||||||||||| Sbjct 518 GATGTACAAAAGCTACCAGGATCTTTCTGATGCATTGGCCAAAATGTTCAGCTCCTTTAC 577 Query 515 CATGGGGAGTTATGGAGCACAAGGGATGATAGATTTCATGAACGAGAGTAAAG-TGATGG 573 ||||| | |||||||||||||| ||||||||||||||||||||||| ||| | ||| Sbjct 578 TATGGGAAACTATGGAGCACAAGGAATGATAGATTTCATGAACGAGAG-CAAGCTAATGA 636 Query 574 ATCTGTTGAACAGTTCTGAGTATGTTCCAAGCTACGAGGACAAAGATGGTGACTGGATGC 633 ||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 637 ATCTGCTGAATAGCTCTGAGTATGTGCCAAGCTACGAGGACAAAGATGGTGACTGGATGC 696 Query 634 TCGTTGGTGATGTCCCCTGGCCGATGTTTGTCGAGTCATGCAAACGTTTGCGCATAATGA 693 ||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| |||| Sbjct 697 TCGTTGGCGATGTCCCATGGGAAATGTTTGTCGAGTCTTGCAAACGTTTGCGCATTATGA 756 Query 694 AAGGATCCGAAGCAATTGGACTTGCTCCAAGAGCGATGGAGAAGT--T-CAAGAACAGAT 750 | ||||| |||||| ||||||||||||| ||||| |||||||||| | ||||||||||| Sbjct 757 AGGGATCTGAAGCAGTTGGACTTGCTCCGAGAGCAATGGAGAAGTACTGCAAGAACAGAT 816 Query 751 CATGAA 756 | |||| Sbjct 817 CTTGAA 822 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71887180440 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5