BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493456 Length=1711 Score E Sequences producing significant alignments: (Bits) Value AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 2388 0.0 AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 787 0.0 > AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr4:8334176-8337273 FORWARD LENGTH=1768 Length=1768 Score = 2388 bits (1293), Expect = 0.0 Identities = 1622/1769 (92%), Gaps = 69/1769 (4%) Strand=Plus/Plus Query 2 AATCACCAAACTCAATTAAAT----A-AAAACAA--ATTA-T-T--CTT-ATC-TCTTCT 48 ||||||||||||||||||||| | |||| || |||| | | ||| || |||||| Sbjct 10 AATCACCAAACTCAATTAAATAAAAAGAAAAAAATTATTATTATCCCTTCTTCTTCTTCT 69 Query 49 TCGTCTTCGTCTTCGATTCTCCTGATTCATGTCGTTTAAATTTTTGA-CGATC-TCAGAA 106 ||||||||||||| |||||||||||||||||||| |||||||||| | ||||| || ||| Sbjct 70 TCGTCTTCGTCTTTGATTCTCCTGATTCATGTCGCTTAAATTTTT-AGCGATCTTC-GAA 127 Query 107 TCCCATTTTCCTTCGGGAATCTGACA--TTTTCTC--G---------TATCCAAATC-G- 151 |||||||||||||||||||||||||| ||||||| | |||||||||| | Sbjct 128 TCCCATTTTCCTTCGGGAATCTGACATTTTTTCTCGGGAAATTTTTTTATCCAAATCGGA 187 Query 152 G---AG-A-CG----T-GAGAAT-CGCTATGGATGAGACGTATTTTGATCTATTGAATTT 200 | || | || | |||||| ||||||||||||||| |||||||||||||||||||| Sbjct 188 GTAAAGTATCGAATCTAGAGAATCCGCTATGGATGAGACCTATTTTGATCTATTGAATTT 247 Query 201 CTTGAAGAATCCCTCTTTTACAGAGACATTTGTCGACATCTTACTATGTGCAGTTCCGAT 260 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 248 CTTTAAGAATCCCTCTTTTACAGAGACATTTGTCGACATCTTACTATGCGCAGTTCCGAT 307 Query 261 TTGGCTCGCCGTCATGATCGGGTTATTAATCGGATGGTCTTGGCGTCCAAGATGGACCGG 320 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308 TTGGCTCGCCGTTATGATCGGGTTATTAATCGGATGGTCTTGGCGTCCAAGATGGACCGG 367 Query 321 TTTGATCTATTTAGGGTTTCGGTCTAAGCTTCGGTTTCTATGGACTGCACCTCCTGGATT 380 ||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||| || Sbjct 368 TTTGATCTATTTAGGGTTTCGTTCTAAGCTTCGGTTTTTATGGACCGCACCGCCTGGGTT 427 Query 381 TGGTGCTCGTAGGCTTTGGCTTGCTTTCACCGCTCTTTCTGCTTTCTCCGTTTGTCGCAC 440 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct 428 TGGTGCTCGTCGGCTTTGGCTTGCTTTCACCGCTCTCTCTGCTTTCTCCGTTTGCCGAAC 487 Query 441 CATCTGGTCAAGGAATGATACAAGAGCTAATAAATCGTCGACCGGTTCAG---C-T---- 492 |||||||||||||||||| || ||||||||||||||| |||||||||||| | | Sbjct 488 CATCTGGTCAAGGAATGACACCAGAGCTAATAAATCGGCGACCGGTTCAGCTTCGTCGCA 547 Query 493 ----CCTGTGGAAGAGAGTGATGAATCAGGATTAGTCTCAAGAGGTAGCGATAACATGAG 548 ||||| || || | ||||||||||||||| | ||||||||||||||||||| || Sbjct 548 GACGCCTGTTGAGGATAATGATGAATCAGGATTGGCCTCAAGAGGTAGCGATAACGGGAC 607 Query 549 GGTGACAGAGGATATTGTGACAGAGAATGATTTAGAGCATCTGCTTCAATTGCTTGAAGT 608 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 608 GGTGACAGAGGATATTGTGACAGAGAATGATTTAGAGCATCTGCTTCAGCTGCTTGAAGT 667 Query 609 TGGGAATGCAGCTATGGAATGGCAATCTATGATGGATAAGACTACTCCAAACATGAGCTA 668 ||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 668 TGGAAATGCAGCTTTGGAATGGCAATCTATGATGGATAAGACTACTCCAAATATGAGCTA 727 Query 669 CCAGGCTTGGCGTCATGAGCCTGAGACAGGTCCTGTTATTTATCGCAGTCGAACTGTGTT 728 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 728 CCAGGCTTGGCGTCATGAGCCTGAGACAGGTCCTGTTATTTATCGCAGCCGGACTGTGTT 787 Query 729 TGAGGATGCAACTCCAGATATTGTTAGGGATTTCTTCTGGGATGATGAGTTTCGACCTAA 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 788 TGAGGATGCAACTCCAGATATTGTTAGGGATTTCTTCTGGGATGATGAGTTTCGACCTAA 847 Query 789 ATGGGATTTTATGCTTGCCAACTTCAAAACTTTGGAGGAGGACACTCAGACAGGAACGAT 848 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 848 ATGGGATTTCATGCTTGCCAACTTCAAAACGTTGGAGGAGGACACTCAGACAGGAACAAT 907 Query 849 GATTGTTCAGTGGAGAAAAAAGTTTCCATTTTTCTGCAGCGACCGAGAGTATATCATTGG 908 ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct 908 GATTGTTCAGTGGAGAAAAAAGTTTCCTTTTTTCTGTAGTGACCGAGAGTATATCATTGG 967 Query 909 CCGGAGAATATGGGAGTCTGGAAAGAAGTATTACTGTGTGACAAAGGGAGTTCCTTATCC 968 ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 968 CCGGAGAATATGGGAGTCTGGGAAGAAGTATTATTGTGTCACAAAGGGAGTTCCTTATCC 1027 Query 969 AGCTCTACCAAAGCGTGATAAGCCGAGGCGTGTTGAGCTTTATTTCTCAAGTTGGGTTAT 1028 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1028 AGCTCTACCAAAGCGTGATAAGCCAAGGCGTGTTGAGCTTTATTTCTCAAGTTGGGTTAT 1087 Query 1029 CAGAGCAGTTGAATCCCGAAAAGGAGATGG--A-CTAACAGCTTGTGAAGTAT-CCTTAG 1084 |||||| ||||||||||||||||||||||| | | ||| ||||||||||| | |||| | Sbjct 1088 CAGAGCGGTTGAATCCCGAAAAGGAGATGGACAGCAAACGGCTTGTGAAGTTTCCCTT-G 1146 Query 1085 TCCACTACGAAGACATGGGAATCCCAAAAGATGTAGCAAAGTTAGGTGTCCGTCATGGCA 1144 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1147 TCCACTACGAAGACATGGGCATCCCAAAAGACGTAGCAAAGTTAGGTGTCCGTCATGGCA 1206 Query 1145 TGTGGGGAGCTGTAAAGAAGCTAAACTCCGGTTTACGAGCATACCAATCTGCCAGAAAAT 1204 ||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct 1207 TGTGGGGAGCTGTCAAGAAGCTAAACTCTGGTTTACGAGCGTACCAATCCGCCAGAAAAT 1266 Query 1205 CAGACTCATCTCTATCCCGGATCGCCCAAATGGCAAGAATCACTACAAAACTGAACATGG 1264 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1267 CAGACTCATCTCTATCTCGGATCGCCCAAATGGCAAGAATCACTACAAAACTGAACATGG 1326 Query 1265 ATTCTGCAGAATCATCTTCAAGAGATGAAGACAGAAGCAGAGCAATGGACTATGCAAGGA 1324 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct 1327 ATTCTGCAGAATCATCTTCAAGAGATGAAGACAGAAGCAGAGCAATGGAATATGC--G-A 1383 Query 1325 GACAACGGGACCATTTGAGAATGGACTGGAAATGGGTTGTTGTAGGAGGTGTCGCATTGG 1384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1384 GACAACGGGACCATTTGAGAATGGACTGGAAATGGGTTGTTGTAGGAGGTGTCGCATTGG 1443 Query 1385 CTTGTGGTCTTCACACTGGGATCATTGGTAAGGCTTTACTGGCTGGAGCTGGCCAGAGAC 1444 ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1444 CTTGTGGCCTTCACTCTGGGATCATTGGCAAGGCTTTACTGGCTGGAGCTGGCCAGAGAC 1503 Query 1445 TGGCGCGTAGGTGAAAAACCTTGTCATATTCTTATTATATCTTCCCTTGACAGAAAAGAA 1504 |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1504 TGGCTCGTAGGTGAGAAACCTTGTCGTATTCTTATTATATCTTCCCTTGACAGAAAAGA- 1562 Query 1505 GAA-CATATACATATAACAAAGGGAAATGTATTCTTCTTGCAACTCCTATGAGAAAGGCA 1563 ||| ||||| ||||||| |||||||||||||| || ||||||||||| |||||| |||| Sbjct 1563 GAAACATATGCATATAATTAAGGGAAATGTATTATTTTTGCAACTCCTCTGAGAAGGGCA 1622 Query 1564 TGTGGTTTTGACGGTGAACCATGTAGAGTAGTAGTTTTAAACTATGGAGTCTTTTAAGTT 1623 |||||||||| |||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct 1623 TGTGGTTTTGGTGGTGAACCATGTAGAGTAGTAGCTTTAAACTATGGAGTCAT--AAGTT 1680 Query 1624 CTTTGAGTTCTATCTCGTTAC-ACAGGATAGTGAGATATGTATTTTATAAACTATATGAA 1682 |||||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct 1681 ATTTGAGTTCTATCTTGT-ACCACAGGATAGTGAGATATGTATTTTATAAACTATATGAA 1739 Query 1683 TCTACATAGCTTCTAAAAGCTTAAAATCT 1711 ||||||||||||||||||||||||| ||| Sbjct 1740 TCTACATAGCTTCTAAAAGCTTAAATTCT 1768 > AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:8207387-8209270 REVERSE LENGTH=1574 Length=1574 Score = 787 bits (426), Expect = 0.0 Identities = 762/921 (83%), Gaps = 36/921 (4%) Strand=Plus/Plus Query 559 GATATTGTGACAGAGAATGATTTAGAGCATCTGCTT-CAAT-TGCTTGAAGTTGGGAATG 616 ||| ||||||||||||| |||||||||||| || || | || ||||||||| ||| |||| Sbjct 444 GATGTTGTGACAGAGAAGGATTTAGAGCATTTG-TTGC-ATCTGCTTGAAGCTGGAAATG 501 Query 617 C-AGCTATGGAATGGCAATCTATGATGGATAAGACTACTCCAAACATGAGCTACCAGGCT 675 | || | | || ||||||||||||||||||||| ||||||| || |||||||| || ||| Sbjct 502 CTAG-TTTTGAGTGGCAATCTATGATGGATAAGTCTACTCCGAATATGAGCTATCAAGCT 560 Query 676 TGGCGTCATGAGCCTGAGACAGGTCCTGTTATTTATCGCAGTCGAACTGTGTTTGAGGAT 735 ||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||||| Sbjct 561 TGGCGTCATGAGCCTGAGATAGGTCCTGTTGTTTATCGTAGTCGAACTGTTTTTGAGGAT 620 Query 736 GCAACTCCAGATATTGTTAGGGATTTCTTCTGGGATGATGAGTTTCGACCTAAATGGGAT 795 | ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 621 GTAACACCAGACATTGTTAGGGATTTCTTCTGGGACGATGAGTTTCGACCTAAATGGGAT 680 Query 796 TTTATGCTTGCCAACTTCAAAACTTTGGAGGAGGA-CACTCAGACAGGAACGATGATTGT 854 ||||||||| ||||||||||||| ||||| || | || |||||||||| | ||||| Sbjct 681 ACTATGCTTGCTTACTTCAAAACTTTAGAGGAAGATC-CTAAGACAGGAACTACCATTGT 739 Query 855 TCAGTGGAGAAAAAAGTTTCCATTTTTCTGCAGCGACCGAGAGTATATCATTGGCCGGAG 914 ||| |||| |||||||| ||||| ||||| || ||||| || || |||||||| |||| Sbjct 740 TCATTGGATTAAAAAGTTCCCATTCTTCTGTAGTGACCGGGAATACATCATTGGTAGGAG 799 Query 915 AATATGGGAGTCTGGAAAG-AAGTATTACTG-TGTGACAAAGGGAGTTCCTTATCCAGCT 972 ||||||||| ||||| ||| || ||||| || |||||| |||||||| || ||| |||| Sbjct 800 AATATGGGAATCTGG-AAGAAAATATTA-TGCTGTGACTAAGGGAGTACCGTATAAAGCT 857 Query 973 CTACCAAAGCGTGATAAGCCGAGGCGTGTTGAGCTTTATTTCTCAAGTTGGGTTATCAGA 1032 || |||||||||||||||||||||| || || |||||||||||||||||| |||||| | Sbjct 858 TTATCAAAGCGTGATAAGCCGAGGCGAGTCGAACTTTATTTCTCAAGTTGGATTATCA-A 916 Query 1033 -GCAGTTGAATCCCGAAAAGGAGAT-GG--ACTAACAGCTTGTGAAGTATC-CTTAGTCC 1087 ||||||||||| ||||||| ||| || | | |||||||||||||| || ||| || | Sbjct 917 TGCAGTTGAATCAAGAAAAGGTGATGGGCAAATGACAGCTTGTGAAGTCTCTCTT-GTTC 975 Query 1088 ACTACGAAGACATGGGAATCCCAAAAGATGTAGCAAAGTTAGGTGTCCGTCATGGCATGT 1147 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 976 ACTACGAAGACATGGGAATCCCAAAAGATGTAGCAAAGTTAGGAGTCCGTCATGGCATGT 1035 Query 1148 GGGGAGCTGTAAAGAAGCTAAACTCCGGTTTACGAGCATACCAAT-CTGCCAGAAAATCA 1206 ||||||||||||||||||||||||| || ||| | || |||||| | || |||||| | Sbjct 1036 GGGGAGCTGTAAAGAAGCTAAACTCTGGCTTAAGGGCGTACCAAAGC-GCTAGAAAACCT 1094 Query 1207 GACTCATCTCTATCCCGGA-TCGCCCAAATGGCAAGAATCACTACAAAACTGAACATGGA 1265 | | || || || |||| | || || |||||||| ||||| ||||| ||||||||||| Sbjct 1095 GGGACGTCGCTCTCACGGAGT-GCGCAGATGGCAAGTATCACCACAAAGCTGAACATGGA 1153 Query 1266 TTCTGCAG-AATCATCTT---CAAGAG-ATGAAGACAGAAG-CAGAGCAATGGACTATGC 1319 || || | || ||||| || ||| | ||||| ||| | | ||||| | || |||| Sbjct 1154 TT-TGGTGGAAACATCTGGGGCA-GAGGACGAAGAGAGAGGAC-GAGCAGTAGAGAATGC 1210 Query 1320 AAGGAGACAACGGGACCATTT-GAGAATGGACTGGAAATGGGTTGTTGTAGGAGGTGTCG 1378 |||| |||| || || || | | | |||||||||||| | ||||||||||| || | Sbjct 1211 GAGGAAACAAAATGATCAGTTCG-GTGTAGACTGGAAATGGATCGTTGTAGGAGGAGTAG 1269 Query 1379 CATTGGCTTGTGGTCTTCACACTGG-GATCATTGGTAAGGCTTTACTGGCTGGAGCTGGC 1437 | ||||||||||| ||||| || | | | || |||||||| ||| ||| ||||||||| Sbjct 1270 CTTTGGCTTGTGGGCTTCATTCTAGTGCT-ATAGGTAAGGCGTTAATGGTTGGAGCTGGA 1328 Query 1438 CAGAGACTGGCGCGTAGGTGA 1458 |||||||| || ||||||||| Sbjct 1329 CAGAGACTTGCTCGTAGGTGA 1349 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84587918325 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5