BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493531 Length=1545 Score E Sequences producing significant alignments: (Bits) Value AT4G13840.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1908 0.0 > AT4G13840.1 | Symbols: | HXXXD-type acyl-transferase family protein | chr4:8013893-8016486 REVERSE LENGTH=1642 Length=1642 Score = 1908 bits (1033), Expect = 0.0 Identities = 1302/1427 (91%), Gaps = 38/1427 (3%) Strand=Plus/Plus Query 1 AGAGAGAGAGATAAATGTCCAAACAAAGG--C----AACTTT-TCATA-T-AAttt--tt 49 |||||||||||||||||||||| |||||| | || ||| | || | ||||| || Sbjct 27 AGAGAGAGAGATAAATGTCCAAGCAAAGGTTCATATAATTTTATGTTATTAAATTTGCTT 86 Query 50 tttCTTTGTTGAAGTGTTACATACATCGATCGACTTGTTAACTTCAAAGATCACGTAGTA 109 ||| |||||| |||||||||||||||||||||||||||| | ||| | | | | | | Sbjct 87 TTTTTTTGTTAAAGTGTTACATACATCGATCGACTTGTT-AGTTC--A-A--A-G-A--A 136 Query 110 TCAGTCCAACTCCACTGAGTCATCATGGGTCGATCTCTAGAACGGGGACAGGGACAAGGT 169 ||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| ||| Sbjct 137 TCAGTTTAACTCCACTGAGCCATCATGGGTCGATCTCAAGAACAGGGACAGGGACAGGGT 196 Query 170 CCGCTTCACAGCATCCGGTTATCGACCGTGGGTGCGATCAGGCCGACAGAGACCGGTACG 229 ||| |||||||||| ||| |||| ||||| ||||||| | ||||||||||||| |||||| Sbjct 197 CCGGTTCACAGCATTCGGCTATCTACCGTAGGTGCGACCCGGCCGACAGAGACGGGTACG 256 Query 230 ACCCACGAACCAACCGGTTTAGACCTAGCCATGAAGCTCCACTACCTCAAGGCGGCTTAC 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 257 ACCCACGAACCAACCGGTTTAGACCTAGCCATGAAGCTCCACTACCTCAAGGCGGCATAC 316 Query 290 ATTTACTCAGCCGAGACAGCACGTGACTTAACCGTGAGACACCTGAAGGAGGCCATGTTC 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 ATTTACTCAGCCGAGACAGCACGTGACTTAACCGTGAGACACCTGAAGGAGGCCATGTTC 376 Query 350 ATGTTGTTCGACCAGATAGCTTGGACCACAGGCAGGTTCTCACGGAGAGACTCCGGCCGT 409 ||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||| Sbjct 377 ATGTTGTTCGACCAGATCGCTTGGACCACAGGCAGGTTCTCAAGGAGAGACTCGGGCCGT 436 Query 410 CCGTACATCAAGTGCAACGACTGCGGCACGCGTTTTGTGGAAGGTCAATGCAATCTCACT 469 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 437 CCGTACATCAAGTGCAACGACTGCGGCACACGTTTCGTGGAAGGTCAATGCAATCTCACT 496 Query 470 GTCGAAGAGTGGCTCAGTAAACCGGACCGGTCAGTTGATGAGTTTCTGATTTACCATCAA 529 || || |||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 497 GTGGAGGAGTGGCTCAGTAAACCGGACCGGTCAGTTGATGAGTTTCTGGTTTATCATCAT 556 Query 530 CCTATTGGACCGGAGTTGACGTTCTCACCTTTGATCTATGTTCAGATGATCCGGTTTAAA 589 |||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||| Sbjct 557 CCTATTGGACCGGAATTGACGTTCTCTCCTTTGATCTACGTTCAGATGACCCGGTTTAAA 616 Query 590 TGCGGAGGATTAGGTTTGGGCCTAAGCTGGGCCAATATAATAGGAGACTCATTCTCTCTA 649 |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 617 TGCGGAGGATTAGGGTTGGGCCTAAGCTGGGCCAATATAATAGGAGACGCATTCTCTCTG 676 Query 650 TTCTATGCCTTCAACTTATGGGCTAAG-CTCATTACCGGCGAAAAGATTCATGTCCCAAC 708 ||||||||||||||||||||||||||| | ||||||||| ||||||||| ||| |||||| Sbjct 677 TTCTATGCCTTCAACTTATGGGCTAAGGC-CATTACCGGAGAAAAGATTTATGCCCCAAC 735 Query 709 A-CTC--TCTA-AGGGAGACAGAAGGTTCCAAAGTCCAAACCCGACGGTTAAAGACCCGG 764 | | | |||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| Sbjct 736 AACACCCTCTATAGG-AGAGAGAAGGTTCCAAAGCCCAAACCCGACGGTTAAAGATCCGG 794 Query 765 TTTCAATCAAACGGGTCGA-CCCGGTTGGAGATCTCTGGGTCACTCCAAACGACAAGAAA 823 ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 795 TTTCAATTAAACGGGTCGAACCCG-TTGGAGATCTCTGGGTCACTCCAAACGACAAGAAA 853 Query 824 ATGGCGAATTACTGTTTCAAAATCGTC-GTCGCCGATCAGATA-CAACCACATTTTCCGG 881 ||||||||||||||||||| || || ||||||||||||||| || ||||||||||||| Sbjct 854 TTGGCGAATTACTGTTTCAATCTC-TCAGTCGCCGATCAGATATCA-CCACATTTTCCGG 911 Query 882 CGAAGGGAGCTGA-TCCGATTCCGGTGTTCGAGATTCCCTCCGGGATCATTTGGAAATGC 940 ||||||||| ||| || |||||||||||||||||||| | |||| ||||| ||||||||| Sbjct 912 CGAAGGGAGATGACTC-GATTCCGGTGTTCGAGATTCTCGCCGGAATCATATGGAAATGC 970 Query 941 ATAGCTAAGGTTAGGGAAGAGCCAAAGCCTGTGACCGTTACGATCATCAAAAAGGATCCG 1000 |||||||| ||||||| ||||||||||||||| || ||||||||||| ||||| |||||| Sbjct 971 ATAGCTAAAGTTAGGGTAGAGCCAAAGCCTGTAACGGTTACGATCATTAAAAAAGATCCG 1030 Query 1001 AACGATCTGAAACCTAACAAGATTCGCAACAGTCAGGTGATAAGTTCAGTTCAA-GTTGA 1059 ||||||||||||| ||| |||||| |||||||||||||| || ||||| | || || Sbjct 1031 AACGATCTGAAACTTAATGCGATTCGAAACAGTCAGGTGATCAGCTCAGTG-AGCGTGGA 1089 Query 1060 TTTTCCGGTGGCAGATGCGACGGTGGAGGAATTGGTGAAAGCTATGGCGGAAGCGAAGGA 1119 |||||||||||| || ||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 1090 TTTTCCGGTGGCGGAAGCGACGGTGGAGGAATTAGTGAAAGCTATGGGGGAAGCGAAGGA 1149 Query 1120 TGAGAGAAGTGGAATTGAGGAGATCGGAGAGAGTTGTGATGGGAATTTGGATTTTGTTGT 1179 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1150 TGAGAGATGTGGAATTGAGGAGATCGGAGAGAGTTGCGATGGGAATTTGGATTTTGTTGT 1209 Query 1180 TTATGGTGCGAAATTGACGTTTTTGGATCTGAGTGGTGAGGATTTGTATGAGGCGAAAGT 1239 |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1210 TTATGGAGCGAAATTGACGTTTCTGGATCTGACTGGTGAGGATTTGTATGAGGCGAAAGT 1269 Query 1240 GATGGGGAAGTCGCCGGAGTCGGTTTATTGTAATGTTGAGGGGGTTGGGGAGGAAGGATT 1299 |||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||| Sbjct 1270 GATGGGGAAGTCGCCGGAGTCGGTTTATTGTAATGTGGAGGGGATAGGGGAGGAGGGATT 1329 Query 1300 GGTGGTTGTTTACGCGGCGGCGAAATCGGAGGAGAGGATGGTGACGGTGACGTTGCCGGA 1359 ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct 1330 GGTGGTTGTTTACGCGGCGGCGAAATCGGAGGAGAGGGTTGTGACGGTTACGTTGCCGGA 1389 Query 1360 GGAAGAGATGGAGAGGGTAAAATTGGAATTTAAGAAGTTTGGTTTGA 1406 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1390 GGAAGAGATGGAGAGGGTAAAATTGGAATTTAAGAAGTTTGGTTTGA 1436 Score = 106 bits (57), Expect = 7e-22 Identities = 78/88 (89%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 1459 aaaaaaaaCAGTAAAGTTTCTGGTGATTTTATTTATCTCTGTG-TTCTGTTGGATTGTAA 1517 |||||||| ||||||||||| | || |||||| ||| | | || || ||||||||||||| Sbjct 1535 AAAAAAAAAAGTAAAGTTTCCGTTGGTTTTATGTATGTTTATGTTTTTGTTGGATTGTAA 1594 Query 1518 TTTGTAACGTTGTTGTAAAATTAAATAA 1545 |||||||||||||||||||||||||||| Sbjct 1595 TTTGTAACGTTGTTGTAAAATTAAATAA 1622 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76254627855 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5