BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493590 Length=1990 Score E Sequences producing significant alignments: (Bits) Value AT5G35170.1 | Symbols: | adenylate kinase family protein | chr... 1509 0.0 > AT5G35170.1 | Symbols: | adenylate kinase family protein | chr5:13419166-13423746 FORWARD LENGTH=2143 Length=2143 Score = 1509 bits (817), Expect = 0.0 Identities = 864/887 (97%), Gaps = 2/887 (0%) Strand=Plus/Plus Query 931 ATAAAGCATCTCCTGTTCAGGACAAATGGAGAGGAATACCGACGAGATTGAATAACATTC 990 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 993 ATAAAGCATCTCCTGTTCAGGATAAATGGAGAGGAATACCGACGAGATTGAATAACATTC 1052 Query 991 CTCATTCGAGAGATATCAGGGCTTATTTTTATGAAGATGTGCTACAAGCCACAATTAGAT 1050 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1053 CACATTCGAGGGATATCAGGGCTTATTTTTATGAAGATGTGCTGCAAGCCACAATTAGAT 1112 Query 1051 CTATCAAGGATGGAAACACCCGTCTTCGGGTGGACATAAATATCCCTGAGCTTAATCCGG 1110 ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 1113 CTATCAAGGATGGTAACACCCGTCTTCGGGTGGACATTAATATCCCTGAGCTAAATCCGG 1172 Query 1111 AAATGGATGTTTACCGGATAGGAACCTTGATGGAACTTGTTCGTG-TTCTAGCTTTATCA 1169 |||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| Sbjct 1173 AAATGGATGTTTACCGGATAGGAACCTTGATGGAACTTGTTCAAGCTT-TAGCTTTATCA 1231 Query 1170 TTCGCTGACGATGGAAAAAGAGTGAAGGTTTGTGTTCAGGGATCAATGGGGGAAGGTGCA 1229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1232 TTCGCTGACGATGGAAAAAGAGTGAAGGTTTGTGTTCAGGGATCAATGGGGGAAGGTGCA 1291 Query 1230 CTCGCTGGGATGCCATTGCAGTTGGCAGGCACTCGAAAGATTTTAGAATATATGGACTGG 1289 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 CTTGCTGGGATGCCATTGCAGTTGGCAGGCACTCGAAAGATTTTAGAATATATGGACTGG 1351 Query 1290 GGTGATGATGAAACTTTGGGAACTTTCGTCAAGCTTGGTGCAATTGGTGGTAAAGAAGTT 1349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1352 GGTGATGATGAAACTTTGGGAACTTTCGTCAAGCTTGGTGCAATTGGTGGTAAAGAAGTT 1411 Query 1350 GATGAAGAAGACGACATGTTCATCTTAGTGGCTCCACAAAATGCTGTTGGAAACTGTATT 1409 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1412 GATGAAGAAGATGACATGTTCATCTTAGTGGCTCCACAAAATGCCGTTGGAAACTGTATT 1471 Query 1410 ATAGATGATCTTCAAGCGATGACTACTGCTGCTGGGAAAAGGCCAGTTGTACTTATCAAT 1469 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472 ATAGATGATCTACAAGCGATGACTACTGCTGCTGGGAAAAGGCCAGTTGTACTTATCAAT 1531 Query 1470 CCTCGCCTCAAGGACTTGCCCGCTTCAAGTGGCATAATGCAAACAATGGGCAGGGAGCAA 1529 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1532 CCTCGCCTCAAGGACTTGCCCGCTTCGAGTGGCATAATGCAAACAATGGGCAGGGAGCAA 1591 Query 1530 AGGCTGGAATATGCCTTAACGTTTGACAACTGCTATGTATTCCGGCTTCTCTATTATTTG 1589 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1592 AGGCTGGAATATGCTTTGACGTTTGACAACTGCTATGTATTCCGGCTTCTCTATTATTTG 1651 Query 1590 GGAACACAATACCCGATTATGGGCGCTCTAAGGATGTCTTATCCTTACCGGTATGAGCTT 1649 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1652 GGAACACAATACCCGATTATGGGCGCTCTAAGGATGTCTTATCCATACCGGTATGAGCTT 1711 Query 1650 TATAAGAGAGTGAATGAGGAAAATGGAAAGGAGAAATATGTCTTGCTAGCAACGTACTCT 1709 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 1712 TATAAGAGAGTGAACGAGGAAAATGGAAAGGAGAAATATGTCTTGCTAGCAACGTACGCT 1771 Query 1710 GAAAGACCAACCCCTGAACAAATCGACGATGCCTTCTCTGGAAAATCGCGGGATCAAAGC 1769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1772 GAAAGACCAACCCCTGAACAAATCGACGATGCCTTCTCTGGAAAATCGCGGGATCAAAGC 1831 Query 1770 AAGAAGCCGTCAGGAATCTGGGGGTTCTTGAGCAGCGTGTTTTCGTA 1816 |||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 1832 AAGAAGGCGTCAGGAATCTGGGGGTTCTTGAGTAGCGTGTTTTCGTA 1878 Score = 1277 bits (691), Expect = 0.0 Identities = 830/895 (93%), Gaps = 18/895 (2%) Strand=Plus/Plus Query 18 GAGGAGTTAACAATGGCGtctctatctctcacctctgctcatttctcttcaacttcttct 77 ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 101 GAGGATTTAACAATGGCGTCTCTTTCTCTCAGTTCTGCTCATTTCTCTTCAACTTCTTCT 160 Query 78 tcgtctcgctcctctGTTTCCACTTCATCGCTTTCTCCGTCCACTCCTTCTCTCCCTCTC 137 || |||||||||||| | ||||||||||||||||||||||| | |||||||||||||| Sbjct 161 TCATCTCGCTCCTCTATATCCACTTCATCGCTTTCTCCGTCGTCAACTTCTCTCCCTCTC 220 Query 138 TTACGATCACC-A-------CCG--A----T-CCGCCGCCGTCGTCTCTCCTTCTCTTTC 182 |||| |||||| | ||| | | || |||||| |||||||||||||| || Sbjct 221 TTACAATCACCGATCCGCCGCCGTTACCGCTCCCTCCGCCGCCGTCTCTCCTTCTCCGTC 280 Query 183 ATACCCCGTCGTACTTCTCACTCCGTCTCCACTTCCAGTTCTTCTCAGATTAGGTGTTCG 242 || |||||||| ||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct 281 ATTCCCCGTCGGACTTCTCGCTCCTTCTCCACTTCCA---ATTCTCAGATTAGGTGTTCG 337 Query 243 ATAGATGAGCCATTGAAGGTGATGATTTCGGGTGCACCGGCTTCAGGAAAAGGCACTCAA 302 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 338 ATAAATGAGCCGTTGAAGGTGATGATTTCGGGTGCACCGGCTTCAGGAAAAGGCACTCAA 397 Query 303 TGTGAGCTCATTGTTCATAAGTTTGGTTTGGTGCACATATCAACGGGGGATCTATTGAGG 362 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 398 TGTGAGCTCATTGTTCACAAGTTTGGTTTGGTGCACATATCAACAGGGGATCTATTGAGA 457 Query 363 GCTGAAGTGTCAGCTGGGACAGATATTGGAAACAGAGCAAAAGAGTTCATGAATTCGGGT 422 || || |||||| ||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 458 GCAGAGGTGTCATCTGGGACAGATATTGGAAAGAGAGCAAAAGAGTTCATGAACTCGGGT 517 Query 423 AGTTTGGTTCCGGATGAGATTGTCATTGCGATGGTGGCTGGAAGATTATCACGTGAAGAT 482 ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 518 AGTTTGGTTCCTGATGAGATTGTTATAGCGATGGTGGCTGGAAGATTATCACGTGAAGAT 577 Query 483 GCTAAAGAACAAGGATGGCTTCTTGATGGATTTCCACGGAGTTTTTCCCAGGCACAAAGT 542 |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 578 GCTAAAGAGCATGGATGGCTTCTTGATGGATTTCCACGGAGTTTTGCCCAGGCACAAAGT 637 Query 543 CTGGATAAACTGAACGTGAAACCTGACATTTTTCTCTTACTAGATGTTCCTGATGAAATT 602 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 638 CTGGACAAACTGAACGTGAAACCTGACATTTTTATCTTACTAGATGTTCCTGATGAAATT 697 Query 603 CTGATTGATAGATGTGTTGGTAGAAGGTTGGATCCAGTGACAGGAAAAATTTATCATATT 662 ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 698 CTGATCGATAGATGTGTTGGTCGAAGGTTGGATCCAGTGACTGGAAAAATTTATCATATC 757 Query 663 AAAAATTACCCTCCTGAATCAGATGAAATTAAAGCAAGACTGGTCACACGCCCTGATGAT 722 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 758 AAAAATTACCCTCCTGAATCAGATGAAATTAAAGCAAGACTGGTTACACGCCCGGATGAT 817 Query 723 ACAGAGGAGAAGGTAAAAGCACGTCTGCAAATATACAAACAAAATTCTGAAGCGATTATT 782 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 818 ACAGAGGAGAAGGTAAAAGCACGGCTGCAAATATACAAACAAAATTCTGAAGCGATTATT 877 Query 783 TCAGCATACTCAGATGTTATGGTCAAGATTGATGCAAACAGGCCAAAAGAAGTGGTTTTC 842 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 878 TCAGCATACTCAGATGTTATGGTCAAGATTGATGCAAACAGGCCAAAAGAAGTGGTTTTC 937 Query 843 GAGGAGACCCAGACTCTACTGTCCCAGATACAGTTAAAGAGAATGATAAAGACTG 897 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 938 GAGGAGACCCAGACTCTACTGTCTCAGATACAGTTAAAGAGAATGATAAAGACTG 992 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98593870380 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5