BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493645
Length=3335
Score E
Sequences producing significant alignments: (Bits) Value
AT5G35970.1 | Symbols: | P-loop containing nucleoside triphosp... 4974 0.0
> AT5G35970.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:14118876-14123340
REVERSE LENGTH=3332
Length=3332
Score = 4974 bits (2693), Expect = 0.0
Identities = 3163/3373 (94%), Gaps = 99/3373 (3%)
Strand=Plus/Plus
Query 1 AAATAAAAATAAAAATATTTCTGAGAGCCTCAAGTTTAATTTTGCGGCTTAGATTTAAAT 60
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 16 AAACAAAAATAAAAATATTTCTGAGAACCTCAAGTTTAATTTTGCGGCTTAGATTTAAAT 75
Query 61 TCGTCTCTCAAACTCAAATATCTGAAAAAACTTTTCTCCAATAATATAAATA-GCTTCCA 119
||||||||||||||||||||||||||||||| ||||||||||| |||||||| | || ||
Sbjct 76 TCGTCTCTCAAACTCAAATATCTGAAAAAACCTTTCTCCAATA-TATAAATAAG-TTACA 133
Query 120 CTAGATTTTCGATTTCTCTGTGTATTTTCCTTTCGATTCCCAGAAAATGTCACTAGCTTC 179
| ||| |||| |||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct 134 CGAGACTTTCAATTTCTCTGTATATTTTCCTTTTGATTCCCAGAAAATGTCACTAGATTC 193
Query 180 TGCTTTCTAGCTTGCGTTTTCTCGGGAATCTGAAG---------GTA---AATTTCTGGA 227
||||||||||||||||||||||||||||||||| || ||| ||||
Sbjct 194 CACTTTCTAGCTTGCGTTTTCTCGGGAATCTGAAGTTTCCTTTTGTGTTGAATCGCTGGG 253
Query 228 AAAAATCTGATGGAAGCAGCTTCAAGTTTCTTGTGTAGAAGTATTCGGATTCCGTCGACT 287
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 254 AAAAATCTGATGGAAGCAGCTTCAAGTTTTTTGTGTAGAAGTATTCGGATTCCGTCGACT 313
Query 288 ACAACGGCGACGGCGGCGTTTACGTTTACTAGACC-CTCGGTGAATTACGTTTGTGTGGT 346
|| ||||||||||||||||| ||||| ||| |||| | || | || ||||||||||| |
Sbjct 314 ACTACGGCGACGGCGGCGTTCACGTTCACTCGACCGC-CGTTAAACTACGTTTGTGT--T 370
Query 347 CTCCGATAAGAGAGATGGCGGAGTTCGTGTTTTCCCGACGCGGAAGGTCTTTTGCAGCGG 406
| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ----G-T-----------CGGAGTTCGTGTTTTCCCGACGCGGAAGGTCTTTTGCAGCGG 414
Query 407 CGTTAATGGCGGTTCTAGTTCCAGTGCTACTAAGAAGAAGCCTCGAAGGAAAAGTAATGT 466
|||||||||||| || |||||| ||||||||||||||| |||||||||||||| ||
Sbjct 415 CGTTAATGGCGG--CT----CCAGTGTTACTAAGAAGAAGCCACGAAGGAAAAGTAACGT 468
Query 467 TTCCGATAAACTTAGGTCTAA-AAAAGTTGAGAAGAGGAACGATAATACTGAATCTGTGA 525
||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 469 TTCCGATAAACTTAGGTTTAAGAAAA-TTGAGAAGAGGAACGATAATACTGAATCTGAGA 527
Query 526 GTTTAAGTAGTGAAATTGTTGTTGAGGAGGTTAAGGAGGAAGATGAGAAACCGAAGAGTG 585
|||||||| || | |||| |||| | || | || | | || |
Sbjct 528 GTTTAAGT-GT----T-GTTG---AGGA----ACCGA--A-GA--A----C-GA----T- 559
Query 586 ATAAAGAATTGAGTCTTCGTGCTTTGAATCAAAATGGTGATCCATTAGGGCGGAGAGATT 645
| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 560 A-AA-GAATTGAGTCTTCGAGCTTTGAATCAAAATGGTGATCCATTAGGGCGGAGAGATT 617
Query 646 TAGGGAGGAATGTAGTGAAGTGGATTAGTCAGGCGATGAAGGCGATGGCTTCGGATTTCG 705
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 618 TAGGGAGGAACGTAGTGAAGTGGATTAGTCAGGCGATGAAAGCGATGGCTTCGGATTTTG 677
Query 706 CTAA-TGCGGAGGTTCAGGGGGAGTTTTCGGAGTTGAGGCAGAACGTGGGATCTGGTTTG 764
| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 678 C-AACTGCGGAGGTTCAGGGGGAGTTTTCGGAGTTGAGGCAGAACGTCGGATCTGGTTTG 736
Query 765 ACGTTTGTGATTCAGGCTCAGCCGTATCTCAATGCCATTCCTATGCCATTAGGTTCTGAA 824
|||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 737 ACGTTTGTGATTCAAGCTCAACCGTATCTCAATGCTATTCCCATGCCATTAGGTTCTGAA 796
Query 825 GTCATTTGTTTGAAGGCTTGCACTCATTATCCTACCTTGTTCGATCATTTCCAGAGAGAG 884
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 797 GTCATTTGTTTGAAGGCTTGTACTCATTATCCTACCTTGTTCGATCATTTCCAGAGAGAG 856
Query 885 TTGCGTGATGTTCTTCAAGACCTGGAGCGGAAGAATATAATGGAGAATTGGAAGGAGACT 944
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 857 TTGCGTGATGTTCTTCAAGACCTGGAGCGGAAGAATATAATGGAGAGTTGGAAGGAGTCT 916
Query 945 GAGTCTTGGAAGCTGCTCAAGGAGATAGCAAATTCAGCTCAGCATCGGGAGGTTGCTCGC 1004
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 917 GAGTCTTGGAAGCTGCTCAAGGAGATTGCAAATTCAGCTCAGCATCGGGAGGTTGCTCGC 976
Query 1005 AAAGCTGCTCAAGCAAAGCCTGTTCAAGGAGGTTTTGGG-ATGGACTCAGAGAAGGTGAA 1063
|||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 977 AAAGCTGCTCAAGCTAAGCCTGTTCAAGGAG-TTTTGGGGATGGACTCAGAGAAGGTGAA 1035
Query 1064 GGCTATACAGGCAAGGATTGATGAATTCACCAGCCAGATGTCACAGTTACTTCAAGTGGA 1123
||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1036 GGCTATACAGGAAAGGATTGATGAGTTCACCAGCCAGATGTCGCAGTTACTTCAAGTGGA 1095
Query 1124 ACGAGATACAGAACTGGAAGTTACACAGGAAGAACTTGATGTTATCCCTACTCCAGATGA 1183
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct 1096 ACGAGATACAGAACTGGAAGTTACACAGGAAGAACTAGATGTTGTTCCTACTCCAGATGA 1155
Query 1184 GAGCTCTGATTCTTCAAAACCGATTGAGTTCTTGGTTAGGCACGGTGATGCTCCACAGGA 1243
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1156 GAGCTCTGATTCCTCAAAACCGATTGAGTTCTTGGTTAGGCATGGTGATGCTCCACAGGA 1215
Query 1244 ACTTTGTGATACAATTTGCAATTTGTATGCAGTTAGTACCTCCACAGTGCTTGGAGGTAT 1303
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1216 ACTTTGTGATACAATTTGCAATTTGTATGCAGTTAGTACCTCCACAGGGCTCGGAGGTAT 1275
Query 1304 GCACTTGGTGTTGTTTAAGGTTGGGGGAAACCACCGTCTTCCTCCTACTACACTTTCCCC 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1276 GCACTTGGTGTTGTTTAAGGTTGGGGGAAACCACCGTCTTCCTCCTACTACACTTTCCCC 1335
Query 1364 TGGTGACATGGTTTGCATAAGGGTTTGTGACAGTAGGGGTGCTGGAGCAACTGCCTGTAC 1423
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1336 TGGTGACATGGTTTGCATAAGAGTTTGTGACAGTAGGGGTGCTGGGGCAACTGCCTGTAC 1395
Query 1424 GCAGGGCTTTGTTCACAACCTTGGAGAAGATGGGTGTAGCATTGGTGTGGCTCTAGAATC 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 GCAGGGCTTTGTTCACAACCTTGGAGAAGATGGGTGTAGCATTGGTGTGGCTCTAGAATC 1455
Query 1484 TCGTCATGGAGATCCTACTTTTTCCAAGCTCTTTGGAAAGAGTGTGAGAATTGATCGTAT 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 TCGTCATGGAGATCCTACTTTTTCCAAGCTCTTTGGAAAGAGTGTGAGAATTGATCGTAT 1515
Query 1544 TCATGGGTTGGCCGATGCCCTAACTTACGAGCGTAACTGCGAAGCCCTAATGCTTCTGCA 1603
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1516 TCATGGGTTGGCCGATGCCCTTACTTACGAGCGTAACTGCGAAGCCCTAATGCTTCTGCA 1575
Query 1604 GAAGAATGGTCTGCAGAAGAAAAATCCATCAATATCTGTTGTGGCGACTTTATTTGGGGA 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1576 GAAGAATGGTCTGCAGAAGAAAAATCCATCAATATCTGTTGTGGCGACTTTATTTGGGGA 1635
Query 1664 TGGGGAAGATATAACATGGCTGGAGCAAAATGATTATGTAGACTGGAGTGAAGCAGAGTT 1723
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1636 TGGTGAAGATATAACATGGCTGGAGCAAAATGATTATGTAGACTGGAGTGAAGCGGAGTT 1695
Query 1724 GAGTGATGAGCCAGTGAGTAAGTTATTTGATTCTTCCCAAAGGAGAGCCATAGCTCTTGG 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 GAGTGATGAGCCAGTGAGTAAGTTATTTGATTCTTCCCAAAGGAGAGCCATAGCTCTTGG 1755
Query 1784 AGTAAACaaaaaaaGACCTGTAATGATAGTTCAAGGACCTCCTGGCACAGGAAAGACTGG 1843
||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 1756 AGTAAACAAAAAAAGACCTGTTATGATAGTCCAAGGACCTCCTGGCACGGGAAAGACTGG 1815
Query 1844 AATGCTTAAGGAGGTCATTACCCTTGCTGTTCAGCAGGGGGAAAGAGTACTTGTAACAGC 1903
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1816 AATGCTTAAGGAGGTCATTACCCTGGCTGTTCAACAGGGGGAAAGAGTACTTGTAACAGC 1875
Query 1904 GCCTACTAATGCAGCAGTTGATAATATGGTCGAGAAGCTCTTGCATCTTGGACTAAACAT 1963
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1876 GCCTACTAATGCAGCTGTTGATAACATGGTCGAGAAGCTCTTGCATCTTGGACTAAACAT 1935
Query 1964 TGTCCGAGTAGGAAATCCTGCAAGAATATCATCCGCTGTTGCTTCAAAGTCTTTGGGGGA 2023
|||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct 1936 TGTCCGAGTAGGAAATCCCGCTAGAATATCATCTGCTGTTGCTTCAAAGTCTTTGGGGGA 1995
Query 2024 AATTGTGAACTCTAAGCTTGCAAGCTTCCGAGCAGAGTTGGAAAGGAAGAAGTCAGATTT 2083
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1996 AATTGTGAACTCTAAGCTTGCAAGCTTCCGAGCAGAATTGGAAAGGAAGAAGTCAGATTT 2055
Query 2084 AAGAAAAGACCTTCGGCAATGCATGAGGGATGATGTTCTTGCAGCTGGCATTCGGCAGCT 2143
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2056 AAGAAAAGATCTTCGGCAATGCCTGAGGGATGATGTTCTTGCAGCTGGCATTCGGCAGCT 2115
Query 2144 CTTGAAACAGCTTGGAAAGACGTTGAAGAAGAAAGAAAAGGAGACCGTGAAGGAAATATT 2203
||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |
Sbjct 2116 CTTGAAACAGCTTGGAAAGACGTTGAAGAAGAAGGAAAAAGAGACTGTGAAGGAAATACT 2175
Query 2204 ATCAAATGCACAGGTTGTTTTTGCCACTAACATTGGAGCAGCTGATCCTTTGATTAGGAG 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2176 ATCAAATGCACAGGTTGTTTTTGCCACTAACATTGGAGCAGCTGATCCTTTGATTAGGAG 2235
Query 2264 GCTAGAAACATTTGATTTGGTTGTTATAGATGAAGCTGGTCAGTCTATCGAGCCTTCATG 2323
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2236 GTTAGAAACATTTGATTTGGTTGTTATAGATGAAGCTGGTCAGTCTATCGAGCCTTCATG 2295
Query 2324 CTGGATCCCAATATTGCAAGGGAAACGTTGTATTCTTTCCGGTGATCCATGCCAATTAGC 2383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2296 CTGGATCCCAATATTGCAAGGGAAACGTTGTATTCTTTCCGGTGATCCATGCCAATTAGC 2355
Query 2384 ACCTGTTGTTCTATCACGTAAAGCTTTAGAAGGTGGGCTTGGTGTATCCTTACTGGAAAG 2443
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2356 ACCAGTTGTTCTATCACGTAAAGCTTTAGAAGGTGGACTTGGTGTATCCTTACTGGAAAG 2415
Query 2444 AGCTGCATCTTTACATGATGGAGTTCTTGCGACAAAACTAACAACTCAGTATCGTATGAA 2503
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2416 AGCTGCATCTTTACATGATGGAGTTCTTGCGACAAAATTAACAACTCAGTATCGTATGAA 2475
Query 2504 CGATGTAATCTCTGGTTGGGCATCAAAGGAGATGTATGGTGGATGGTTGAAATCTGCTCC 2563
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2476 CGATGTAATCGCTGGTTGGGCATCAAAGGAGATGTATGGTGGATGGTTGAAATCTGCTCC 2535
Query 2564 AAGTGTGGCCTCTCATCTGCTTATCGATTCTCCTTTTGTGAAGCCTACTTGGATGACACA 2623
||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||
Sbjct 2536 AAGTGTGGCCTCTCATCTGCTTATCGATTCTCCTTTTGTGAAGGCTACTTGGATAACGCA 2595
Query 2624 ATGCCCACTGGTTCTGCTTGACACAAGAATGCCATATGGGAGTTTATCAATGGGCTGCGA 2683
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2596 ATGCCCACTGGTTCTGCTTGACACAAGAATGCCATATGGGAGTTTATCCGTGGGCTGCGA 2655
Query 2684 GGAGCGTCTTG-ATCCAGCTGGTACAGGCTCATTATACAATGAAGGAGAAGCAGATATTG 2742
||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2656 GGAGCGT-TTGGATCCAGCTGGCACAGGCTCATTATACAATGAAGGAGAAGCAGATATTG 2714
Query 2743 TGGTTAATCACGTCATATCTTTGATATATGCAGGTGTTAGTCCAATGGCTATTGCTGTTC 2802
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2715 TGGTTAATCACGTCATTTCTTTGATATACGCAGGTGTTAGTCCAATGGCTATTGCTGTTC 2774
Query 2803 AATCCCCATATGTTGCTCAGGTTCAACTTCTCAGAGAAAGGCTGGATGATTTTCCAGTAT 2862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2775 AATCCCCATATGTTGCTCAGGTTCAACTTCTCAGAGAAAGGCTGGATGATTTTCCAGTGG 2834
Query 2863 CTGATGGAGTTGAGGTCGCAACCATTGACAGCTTTCAAGGGCGGGAGGCTGATGCAGTGA 2922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2835 CTGATGGAGTTGAGGTCGCAACCATTGACAGCTTTCAAGGGCGGGAGGCTGATGCAGTGA 2894
Query 2923 TCATCTCAATGGTACGGTCAAACAACCTAGGTGCAGTGGGATTCCTAGGGGATAGCAGAC 2982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2895 TCATCTCAATGGTACGGTCAAACAACCTAGGTGCAGTGGGATTCCTAGGGGATAGCAGAC 2954
Query 2983 GGATGAACGTAGCCATAACAAGAGCCCGGAAGCACGTGGCAGTGGTATGCGATAGCTCCA 3042
||||||| |||||||| |||||||||||||||||||||||||||||||| || |||||||
Sbjct 2955 GGATGAATGTAGCCATTACAAGAGCCCGGAAGCACGTGGCAGTGGTATGTGACAGCTCCA 3014
Query 3043 CAATCTGCCACAACACGTTCCTTGCAAGACTGTTGCGTCACATACGCTATTTCGGGAGAG 3102
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 3015 CAATCTGCCACAACACGTTCCTAGCAAGACTGTTGCGCCACATACGCTATTTCGGGAGAG 3074
Query 3103 TAAAGCATGCAGACCCTGGTAGCTTGGGAGGGTCAGGACTAGGCTTGGACCCAATGTTGC 3162
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3075 TTAAGCATGCAGACCCTGGTAGCTTGGGAGGGTCAGGACTAGGCTTGGACCCAATGTTGC 3134
Query 3163 CTTACCCAGGCTAAAACCGCTGTAAGTACTACAAAAACCATAATCTTCTTCTTACTCTC- 3221
| |||| || |||||||| |||||||||||||||||||| || ||||| |||||||||
Sbjct 3135 CCTACCTTGGTTAAAACCGTTGTAAGTACTACAAAAACCAGAACCTTCTGCTTACTCTCT 3194
Query 3222 CC-TCTCT-------------G-T-AA-GAAACAGTTTCCATAGCGAATTGTCGTTGTAC 3264
|| ||||| | | || ||||||||||||||||| ||||||||||||||
Sbjct 3195 CCCTCTCTCTCTATCTCTCCCGCTGAAAGAAACAGTTTCCATAGCAAATTGTCGTTGTAC 3254
Query 3265 AGAAAAATTGTTACCACAGAAAATAGCCTCTGTATATGATGACAAGATA-A-TTCATGTA 3322
|||| ||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||
Sbjct 3255 AGAACAATTGTTACCACAGAAAATAGTCTCTGTATATGATGACAATATATAATTCATGTA 3314
Query 3323 TATTTTTACAATT 3335
|||||||||||||
Sbjct 3315 TATTTTTACAATT 3327
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 165952247444
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5