BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg493799 Length=934 Score E Sequences producing significant alignments: (Bits) Value AT5G41850.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1236 0.0 AT5G41860.1 | Symbols: | unknown protein; Has 1807 Blast hits ... 243 3e-63 > AT5G41850.1 | Symbols: | alpha/beta-Hydrolases superfamily protein | chr5:16756698-16758220 REVERSE LENGTH=927 Length=927 Score = 1236 bits (669), Expect = 0.0 Identities = 865/952 (91%), Gaps = 44/952 (5%) Strand=Plus/Plus Query 1 TTGACGAAATTCACCGGCACTGTGACCTCATCGGATCCGGAAAGG-GTGGGATTTGTGGA 59 |||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||| Sbjct 2 TTGACGAAATTCACCGGCACTGTGACCTCATCGGATTCGGAAAGGCTTGGG-TTTGTGGA 60 Query 60 ATCTGGGTCAGGTTCGGCTGATGAA---GTGGTAAAGCTTTCGTCGATGATGTCATTTTC 116 |||||| || ||||||||||||||| ||||| | ||||| |||||||||||||||| | Sbjct 61 ATCTGGATCGGGTTCGGCTGATGAAGTGGTGGTTAGGCTTTTGTCGATGATGTCATTTCC 120 Query 117 CGGC-TTGGAAGAAGCGACGGAGAGAGCCAACGTGAGAAACAAAAGAACGGTGACGGTAA 175 |||| || |||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 121 CGGCGTT-GAAGAAGCGACGGAGAGAGCCAACGT--G-AACAAAAGAACGGTGACGGTAA 176 Query 176 CGGTAACGGT----G-AGC-------GAGGCCATTGTTGCGACTTGTGAAGAAGGAAATC 223 |||||||||| | ||| |||||||||||| ||| ||||||||||||| Sbjct 177 CGGTAACGGTAACGGTAGCGGTGGGGGAGGCCATTGTT-----TTGGGAAGAAGGAAATC 231 Query 224 TGAATTGTTAAAGGTTCCTCTATGGCTTCACGGAGGAAAAGAAGAAAGGAGAATGAAGCA 283 |||||||| ||||||| ||| |||||||||||||||||||||||||||| |||| | | Sbjct 232 TGAATTGTCAAAGGTTTCTCGATGGCTTCACGGAGGAAAAGAAGAAAGGTGAAT---G-A 287 Query 284 TCATGTACTGATAAACAAGAGATTGTATGTTCGCCGGTCGTCGTATTCGCTCACGGTGCC 343 | | | || | ||||||| ||||||||||||||| ||||||| ||||||||| Sbjct 288 --A-G-A---AT---C-AGAGATTCCATGTTCGCCGGTCGTTATATTCGCGCACGGTGCC 336 Query 344 GGTGCTCCCTCTTCTTCCGACTGGATGATTAGATGGAAAGAAATGTTAAAGAAGACATTA 403 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 337 GGTGCTCCCTCTTCTTCCGACTGGATGATTAGATGGAAGGAAATGTTAAAGAAGACATTA 396 Query 404 GAAGCTGTTGAAGTGGTCACATTTGACTATCCTTATATTGCTGATGGGAAAAGAAGAGTT 463 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct 397 GAAGCTGTTGAAGTGGTCACATTTGACTATCCTTATCTTGCTGACGGGAAAAAAAGAGTA 456 Query 464 GCTCCGAAAGCGGAGAAATTGATTGAGTTTCATTTGGATGTTGTTAAAGAAACTGCTGCT 523 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 457 GCTCCGAAAGCGGAGAAATTGATAGAGTTTCATTTGAATGTTGTTAAAGAAACTGCTGCT 516 Query 524 AAATTCCCTGGTCATCCTTTGATATTAGCTGGCAAATCTATGGGTTCTAGAGTAAGCTGT 583 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 517 AAATTCCCTGGTCATCCTTTGATATTAGTTGGCAAATCAATGGGTTCTAGAGTAAGCTGT 576 Query 584 ATGGTTTCAGCTGTGAATGAAGATGTTACAGTTTCAGCTGTGATATGTTTAGGATATCCA 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 577 ATGGTTTCAGCTGTGAATGAAGATGTTACAGTTTCAGCTGTGATATGTTTAGGATATCCA 636 Query 644 CTTAAGGGCGCGAAAGGTGTGATTAGAGACGAGACGT-TGCTGGAAATGGGAGTCCCAGT 702 ||||||||||||||||||| ||| ||||||||||| | | ||||||||||||||||| || Sbjct 637 CTTAAGGGCGCGAAAGGTGCGATAAGAGACGAGAC-TCTACTGGAAATGGGAGTCCCTGT 695 Query 703 GATGTTTGTGCAGGGTAGCAAAGATCCGATGTGTCCTCTGGATAAGCTAGAAGCTGTTTG 762 ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 696 GATGTTTGTGCAGGGAAGCAAAGATCCGATGTGTCCTCTGAATAAGCTTGAAGCTGTTTG 755 Query 763 TAACAAAATGAAAGGTGTGACTGAGGTTCATGTGATTGATGGTGGAGATCACTCCCTCAA 822 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 756 TAATAAAATGAAAGCTGTGACTGAGGTTCATGTGATTGATGGTGGAGATCACTCCTTCAA 815 Query 823 GATTGGGAAGAAACGCCTTGAAACAAAGGAGTTAACACAAGATGAAGTCGAAGATGTCGC 882 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 816 GATTGGGAAGAAACACCTTGAAACAAAGGAGTTAACACAAGAGGAAGTCGAAGATGTCGC 875 Query 883 TCTCAAAGCAATATCAGCTTTTGTCTCCAAATCTCTTGCTCAAAGCTCATAA 934 | | ||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 876 TATGAAAGCAATAGCCGCTTTTGTCTCCAAATCTCTTGCTCAAAGCTCATAA 927 > AT5G41860.1 | Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16757951-16758718 FORWARD LENGTH=768 Length=768 Score = 243 bits (131), Expect = 3e-63 Identities = 172/190 (91%), Gaps = 10/190 (5%) Strand=Plus/Minus Query 1 TTGACGAAATTCACCGGCACTGTGACCTCATCGGATCCGGAAAGGGT-GGGATTTGTGGA 59 |||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||| Sbjct 269 TTGACGAAATTCACCGGCACTGTGACCTCATCGGATTCGGAAAGGCTTGGG-TTTGTGGA 211 Query 60 ATCTGGGTCAGGTTCGGCTGATGAAGTGGTAA--AG-CTTTCGTCGATGATGTCATTTTC 116 |||||| || |||||||||||||||||||| || |||| |||||||||||||||| | Sbjct 210 ATCTGGATCGGGTTCGGCTGATGAAGTGGTGGTTAGGCTTTTGTCGATGATGTCATTTCC 151 Query 117 CGGC-TTGGAAGAAGCGACGGAGAGAGCCAACGTGAGAAACAAAAGAACGGTGACGGTAA 175 |||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 150 CGGCGTTG-AAGAAGCGACGGAGAGAGCCAACGTGA-A--CAAAAGAACGGTGACGGTAA 95 Query 176 CGGTAACGGT 185 |||||||||| Sbjct 94 CGGTAACGGT 85 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45662839623 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5