BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg493967
Length=1228
Score E
Sequences producing significant alignments: (Bits) Value
AT5G40240.2 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1757 0.0
AT5G40230.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1057 0.0
AT4G15540.1 | Symbols: | EamA-like transporter family | chr4:8... 503 2e-141
> AT5G40240.2 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr5:16082125-16084810 REVERSE LENGTH=1349
Length=1349
Score = 1757 bits (951), Expect = 0.0
Identities = 1085/1151 (94%), Gaps = 4/1151 (0%)
Strand=Plus/Plus
Query 80 GAGAAGAGAAAGTGGCGTGGAGGTATTTTACCAGAGATGTTGTGCCGTTTGCTGCTATGT 139
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct 56 GAGAAGAGAAAGTGGCGTGGAAGTACTTTACCAGAGATGTTGTGCCGTTTGCTGCGATGT 115
Query 140 TTGCGGTGGAGTGTACCACGGTTGGGTCAAACACACTGTTTAAGGCTGCAACTATAAGAG 199
|||||||||||||| |||| |||||||||||||| |||||||||||||| ||| ||||||
Sbjct 116 TTGCGGTGGAGTGTGCCACTGTTGGGTCAAACACGCTGTTTAAGGCTGCTACTTTAAGAG 175
Query 200 GATTGAGCTTCTATGTCTTTGTCTTCTACTCTTATGTTGTTTCAACACTTCTCCTTCTTC 259
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 176 GATTGAGCTTCTATGTCTTTGTCTTCTACTCTTATATTGTTTCAACACTTCTCCTTCTTC 235
Query 260 CACTTTCTTTAATCTTTGGAAGGTCAAGAAGATTACCATCAGCCAAGTCTCCTCTCTTCT 319
|||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||
Sbjct 236 CACTTTCTGTAATCTTTGGAAGGTCAAGAAGATTACCAGCAGCTAAGTCTCCTCTTTTCT 295
Query 320 TCAAGATTTTCTTACTTGGGCTTGTCGGGTTCATGTCGCAGATAGCTGGTTGTAAAGGTA 379
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 296 TCAAGATTTTCTTACTTGGGCTTGTTGGGTTCATGTCGCAGATTGCTGGTTGTAAAGGTA 355
Query 380 TAGAATATAGTTCCCCAACTCTTGCCTCTGCTATCAGCAATCTCACACCCGCTTTCACAT 439
| | ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 356 TTGCATACAGTTCCCCAACTCTTGCATCTGCTATCAGCAATCTCACACCGGCTTTCACAT 415
Query 440 TCACGCTTGCTGTTATCTTCAGGATGGAACAAGTAAGGTTAAGAAGCTCTGCGACTCAGG 499
|||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 416 TCACACTCGCTGTTATCTTCAGGATGGAGCAAGTAAGGTTAAGGAGCTCTGCGACTCAGG 475
Query 500 CTAAAATCATTGGCGCAATACTATCTATATCTGGTGCTCTGGTAGTTTTGCTATACAAAG 559
||||||||||||| ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct 476 CTAAAATCATTGGTGCAATACTATCTATATCTGGTGCTCTGGTAGTTGTGCTGTATAAAG 535
Query 560 GCCCACAAGTTCTCG-CTGCTGCATCTTTTACACCTTTATCACCTACCATTTCACTTCAC 618
||||||||||||||| || |||||||||||||| || ||| ||||||| || ||||||||
Sbjct 536 GCCCACAAGTTCTCGCCT-CTGCATCTTTTACAACTGTATTACCTACCGTTACACTTCAC 594
Query 619 CAGCATTTCACCTCATTAGAGTCAAAG-TGGATAATCGGAGGGCTCTTACTTGCTTCACA 677
||||| || |||||| ||||||| ||| |||||||||||||||||||| |||||||||||
Sbjct 595 CAGCAGTTGACCTCAATAGAGTC-AAGCTGGATAATCGGAGGGCTCTTGCTTGCTTCACA 653
Query 678 GTATTTTCTTATATCAGTCTGGTATATTCTTCAGACTCGTGTCATGGAGGTATACCCTGA 737
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 654 GTATTTTCTTATATCCGTCTGGTATATTCTTCAGACTCGTGTCATGGAGGTTTACCCTGA 713
Query 738 AGAAATAACGGTAGTCTTCTTCTACAACTTATTTGCAACACTAATCTCAGTACCAGTATG 797
||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 714 AGAGATAACCGTAGTCTTCTTCTACAATTTATTTGCAACACTAATCTCAGTACCAGTATG 773
Query 798 TCTTCTTGCGGAGAGCAACTTGACTTCTTGGGTACTTAAACCAGACATTTCCCTCGCTAC 857
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 774 TCTTTTTGCGGAGAGCAACTTGACTTCTTGGGTGCTTAAACCAGACATTTCCCTCGCTGC 833
Query 858 AATCATATACTCGGGAATCTTCGTTTCATTATTCAGCGCTCTTACCCACACATGGGGTCT 917
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 834 AATCATATACTCGGGAGTCTTCGTTTCATTATTCAGCGCGCTTACCCACACATGGGGTCT 893
Query 918 GCATCTGAAGGGTCCGGTATACATATCTTTGTTCAGGCCATTGTCTATTGCGATTGCAGT 977
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 894 GCATCTGAAGGGTCCGGTATACATATCCTTGTTCAGGCCATTGTCTATTGCGATTGCAGT 953
Query 978 CGCTATGGGTGCTATATTCCTCGGCGATTCGCTTCACCTTGGGAGTGTCATTGGATCAGT 1037
||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
Sbjct 954 CGCCATGGGTGCTATATTCCTCGGCGATGCACTTCACCTTGGGAGTGTCATTGGATCAAT 1013
Query 1038 GATATTGTGCATTGGATTCTACACTGTGATTTGGGGAAAAGCAAGAGAGGATACAATCAA 1097
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1014 GATATTGTGCATTGGATTCTACACTGTGATTTGGGGCAAAGCAAGAGAGGATACAATCAA 1073
Query 1098 AACTGTAGCTGATTCTGAGCAGTCACCTTTGCTGCTTACACATATCATAGAAGATGAAGC 1157
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1074 AACTGTAGCTGGTTCTGAGCAGTCACCTTTGCTGCTTACACATATCATAGAAGATGGAGC 1133
Query 1158 CTTTCCATTAAATTAGGATTGATGCAAGTGGATTCCTTATACTATTCATTAATAAATATG 1217
||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct 1134 CTTTCCATTAAGCTAGGATTGATGCAAGTGAAATCCTTATACTATTTATTAATAAATATG 1193
Query 1218 TATCCTTAAAA 1228
|||| |||||
Sbjct 1194 GATCCCTAAAA 1204
> AT5G40230.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr5:16079648-16081735 REVERSE LENGTH=1279
Length=1279
Score = 1057 bits (572), Expect = 0.0
Identities = 944/1121 (84%), Gaps = 35/1121 (3%)
Strand=Plus/Plus
Query 85 GAGAAAGTGGCGTGGAGGTA-TTTTACCAGAGATGTTGTGCCGTTTGCTGCTATGTTTGC 143
|||| |||||| ||||| || |||| |||||||||||||||||| |||| ||| | ||
Sbjct 22 GAGACAGTGGCATGGAGTTACTTTT-GCAGAGATGTTGTGCCGTTCACTGCAATGGTCGC 80
Query 144 GGTGGAGTGTACCACGGTTGGGTCAAACACACTGTTTAAGGCTGCAACTA-TAAGAGGAT 202
|||||||||| |||||||| || || |||||||| |||||||| || | | ||||||
Sbjct 81 GGTGGAGTGTGTTACGGTTGGATCTAATACACTGTTCAAGGCTGCGAC-ATTGCGAGGAT 139
Query 203 TGAGCTTCTATGTCTTTGTCTTCTACT-CTTATGTTGTTTCAACACTTCTCCTTCTTCCA 261
||||||||||||||||||||||||| | | ||||||||| | |||||| | |||||||||
Sbjct 140 TGAGCTTCTATGTCTTTGTCTTCTA-TACCTATGTTGTTGCTACACTTGTTCTTCTTCCA 198
Query 262 CTTTCTTTAATCTTTGGAAGGTCAAGAA-GATTACCATCAGCCAAGTCTCCTCTCTTCTT 320
||||| | || ||||||||||||| || ||||||| || |||||| | ||| |||||||
Sbjct 199 CTTTCCCTCATTTTTGGAAGGTCAA-AACGATTACCTTCTGCCAAGACCCCTGTCTTCTT 257
Query 321 CAAGATTTTCTTACTTGGGCTTGTCGGGTTCATGTCGCAGATAGCTGGTTGTAAAGGTAT 380
||| ||||||||||||| |||||| ||||||||||| | ||||| |||||||||||||||
Sbjct 258 CAATATTTTCTTACTTGCGCTTGTTGGGTTCATGTCTCTGATAGTTGGTTGTAAAGGTAT 317
Query 381 AGAATATAGTTCCCCAACTCTTGCCTCTGCTATCAGCAATCTCACACCCGCTTTCACATT 440
|||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 318 AGAATATAGTTCACCAACTCTTGCCTCTGCTATCAGCAATCTGACACCAGCTTTCACATT 377
Query 441 CACGCTTGCTGTTATCTTCAGGATGGAACAAGTAAG-GTTAAGAAGCTCTGCGACTCAGG 499
||||| || ||||||||||| ||||||||| | || ||||| ||||| ||||||||||
Sbjct 378 TACGCTCGCCGTTATCTTCAGAATGGAACAAAT-AGTCTTAAGGAGCTCCGCGACTCAGG 436
Query 500 CTAAAATCATTGGCGCAATACTATCTATATCTGGTGCTCTGGTAGTT-TTGCTATACAAA 558
| |||||||||||| | ||| ||||||||||||||||| |||| ||| || || || |||
Sbjct 437 CCAAAATCATTGGCACGATAGTATCTATATCTGGTGCTTTGGTTGTTATT-CTTTATAAA 495
Query 559 GGCCC-ACAAGTTCTCGCTGCTGCATCTTTTACACCTTTATCACCTACCATTTCACTTCA 617
||||| | ||||||| ||| ||||||| |||||||| ||||||||||||||| ||| |
Sbjct 496 GGCCCTA-AAGTTCTAACTGATGCATCTCTTACACCTCCATCACCTACCATTTCGCTTTA 554
Query 618 CCAGCATTTCACCTCATTAGAGTCAAAG-TGGATAATCGGAGGGCTCTTACTTGCTTCAC 676
||||||||| || ||||| || || || |||||||||||||| || || || ||| |||
Sbjct 555 CCAGCATTTGACTTCATTTGATTC-GAGTTGGATAATCGGAGGTCTTTTGCTCGCTACAC 613
Query 677 AGTATTTTCTTATATCAGTCTGGTATATTCTTCAGACTCGTGTCATGGAGGTATACCCTG 736
||||||| ||| | |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 614 AGTATTTGCTTGTTTCAGTCTGGTATATTCTTCAGACTCGGGTCATGGAGTTATACCCTG 673
Query 737 AAGAAATAACGGTAGTCTTCTTCTACAACTTATTTGCAACACTAATCTCAGTACCAGTAT 796
|||||||||| ||||| ||||| || ||||||| || || || ||||| | ||||||||
Sbjct 674 AAGAAATAACTGTAGTATTCTTGTATAACTTATGCGCTACGCTTATCTCGGCACCAGTAT 733
Query 797 GTCT-TCTTGCGGAGAGCA-ACTTGACTTCTTGGGTACTTAAACCAGACATTTCCCTCGC 854
|||| | ||||||| | | |||||| ||||| |||||||||| | | ||||| ||
Sbjct 734 GTCTAT-TTGCGGA-AAAAGACTTGAATTCTTTTATACTTAAACCGGGTGTCTCCCTTGC 791
Query 855 TACAATCATATACTCGGGAATCTTCGTTTCATTATTCAGCGCTC--TTACCCACACATGG 912
| || |||| ||||||||| ||| ||||||| ||| | |||| ||| ||||| |||
Sbjct 792 TTCAGTCATGTACTCGGGAGGCTTAGTTTCATCATT-TG-GCTCAGTTATACACACTTGG 849
Query 913 GGTCTGCATCTGAAGGGTCCGGTATACATATCTTTGTTCAGGCCATTGTCTATTG-CGAT 971
||||||||||| |||||||| || |||||||| ||||||| ||| |||||||||| | ||
Sbjct 850 GGTCTGCATCTTAAGGGTCCAGTCTACATATCCTTGTTCAAGCCGTTGTCTATTGTC-AT 908
Query 972 TGCAGTCGCTATGGGTGCTATATTCCTCGGCGATTCGCTTCACCTTGGGAGTGTCATTGG 1031
||| ||||||||||||| ||| |||||||||||| | ||| |||||||||||||||||||
Sbjct 909 TGCGGTCGCTATGGGTGTTATGTTCCTCGGCGATGCACTTTACCTTGGGAGTGTCATTGG 968
Query 1032 ATCAGTGATATTGTGCATT-GGATTCTACACTGTGATTTGGGGAAAAGCAAGAGAGGATA 1090
|||| |||| ||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct 969 ATCATTGATTTTGAGC-TTAGGATTCTACACTGTGATTTGGGGAAAAGCAAGAGAGGATT 1027
Query 1091 CAATCAAAACTGTAGCTGATTCTGAGCAGTCACCTTTGCTGC-TTACACATATCATAGAA 1149
||||||||||||| |||| | |||||||||| |||||| ||| || |||| | |||||||
Sbjct 1028 CAATCAAAACTGTGGCTGGTACTGAGCAGTCCCCTTTGTTGCCTT-CACACACCATAGAA 1086
Query 1150 GATGAAGCCTTTCCATTAAATTAG-GATTGATGCAAGTGGA 1189
|| ||||||| | ||||| | | || |||||||||||||
Sbjct 1087 GAAGAAGCCT--C-ATTAAGCT-GTGACTGATGCAAGTGGA 1123
> AT4G15540.1 | Symbols: | EamA-like transporter family | chr4:8873355-8875344
FORWARD LENGTH=1241
Length=1241
Score = 503 bits (272), Expect = 2e-141
Identities = 439/519 (85%), Gaps = 14/519 (3%)
Strand=Plus/Plus
Query 79 AGAGAAGAGAAAGTGGCGTGGAGGTATTTTACCAGAGATGTTGTGCCGTTTGCTGCTATG 138
|||||||||| ||| | |||| ||| |||| ||||||||||| ||||| |||| |||
Sbjct 43 AGAGAAGAGACAGTTTCTTGGAAGTACTTTAAAAGAGATGTTGTTCCGTTCACTGCGATG 102
Query 139 TTTGCGGTGGAGTGTACCACGGTTGGGTCAAACACACTGTTTAAGGCTGC-AACTATAAG 197
| || | |||||||| |||||||| || | || ||||| ||| ||||| | || | ||
Sbjct 103 ATCGCTATAGAGTGTACAACGGTTGGATCCAGCATACTGTATAAAGCTGCTACCT-TGAG 161
Query 198 AGGATTGAGCTTCTATGTCTTTGTCTTCTACTCTTATGTTGTTTCAACACTTCTCCTTCT 257
|||||| ||||| ||||||||||| || ||| ||||||||| | | |||||| |||||||
Sbjct 162 AGGATTTAGCTTTTATGTCTTTGTGTTTTACGCTTATGTTGGTGCTACACTTGTCCTTCT 221
Query 258 TCCACTTTC-TTTAATCTTTGGAAGGTCAAGAAGATTACCAT-CAGCCAAGTCTCCTCTC 315
|| |||||| || |||||||||||||| ||||| || || | ||||||||||| ||||
Sbjct 222 TCTACTTTCACTT-ATCTTTGGAAGGTCGAGAAGTTTGCC-TACAGCCAAGTCTTCTCTT 279
Query 316 TTCTTCAAGATTTTCTTACTTGGGCTTGTCGGGTTCATGTCGCAGATAGCTGGTTGTAAA 375
|||||||||||||||||||||| |||| ||||| ||| ||||| | ||||||||||||||
Sbjct 280 TTCTTCAAGATTTTCTTACTTGCGCTTCTCGGGCTCACGTCGCGGGTAGCTGGTTGTAAA 339
Query 376 GGTATAGAATATAGTTCCCCAACTCTTGCCTCTGCTATCAGCAATCTCACACCCGCTTTC 435
||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 340 GGTATAGAATATAGTTCCCCAACTCTTTCCTCTGCTATCAGCAATCTTACACCAGCTTTC 399
Query 436 ACATTCA-CGCTTGCTGT-TATCTTCAGGATGGAACAAGTAAGGTTAAGAAGCTCTGCGA 493
|| |||| | ||||| | | ||||||||||||||||||||| ||||||||||||||| |
Sbjct 400 ACCTTCATC-CTTGCCATCT-TCTTCAGGATGGAACAAGTAATGTTAAGAAGCTCTGCAA 457
Query 494 CTCAGGCTAAAATCATTGGCGCAATACTATCTATATCTGGTGCTCTGGT-AGTT-TTGCT 551
|||||||||||||||||||| ||||| | |||||||||||||||||||| | || || ||
Sbjct 458 CTCAGGCTAAAATCATTGGCACAATAGTTTCTATATCTGGTGCTCTGGTTA-TTGTT-CT 515
Query 552 ATACAAAGGCCCACAAGTTCTCGCTGCTGCATCTTTTAC 590
|| ||||||||| || |||| | ||||||||| |||||
Sbjct 516 GTATAAAGGCCCAAAACTTCTTGTTGCTGCATCGTTTAC 554
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60341055090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5