BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494187 Length=2191 Score E Sequences producing significant alignments: (Bits) Value AT5G47750.1 | Symbols: D6PKL2, PK5 | D6 protein kinase like 2 |... 3347 0.0 > AT5G47750.1 | Symbols: D6PKL2, PK5 | D6 protein kinase like 2 | chr5:19339703-19342361 REVERSE LENGTH=2277 Length=2277 Score = 3347 bits (1812), Expect = 0.0 Identities = 2034/2141 (95%), Gaps = 16/2141 (1%) Strand=Plus/Plus Query 52 TGCATGTAATTGTAGCAGCAAGCATATATACTGTACTTTTCGAATCTTCTCTGCGCCAAT 111 |||||||||||| |||||||| ||| | | | ||||||||||||||||||||| |||| Sbjct 151 TGCATGTAATTGAAGCAGCAACCAT-T-T-C--TACTTTTCGAATCTTCTCTGCTTCAAT 205 Query 112 CCACACCCAAGGGTTTGAAGGAAGATGTGTCTTTCCCGTTAGCTAAAGATAATCT-ATTT 170 |||||||||||||||| |||||| ||| ||||||||||||||||||||||||| | |||| Sbjct 206 CCACACCCAAGGGTTTCAAGGAATATGGGTCTTTCCCGTTAGCTAAAGATAAT-TAATTT 264 Query 171 TGTGTCCCAATGGCGTCTACTCGTAAACCCAGTGCTCATAAAGCTGAAATCGAAGCTCAG 230 ||||| || |||||||| |||||||||||||||| |||| ||||||| ||||||||||| Sbjct 265 TGTGT-CCGATGGCGTCCACTCGTAAACCCAGTGGTCATGGAGCTGAAGTCGAAGCTCAG 323 Query 231 AAGCGCTCCTCTTCAAATAGTAGTAATACTAAGTCAGCCAAAGCCGAGATTTTTGAGCCG 290 |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct 324 AAGCGCTCCTCTTCGAATAGTAG---TACTAAGTCAGCCAAAGCCGAGACTTTTGAGCCG 380 Query 291 ACGCAGTTACAAAGATCACTAACAAATCCAAGTGCTGTTGGAATTCCGGAGAGTAAACGG 350 | ||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| Sbjct 381 ATGCAATTACAAAGATCAGTAACAAACCCAAGAGCTGTTGGAATTCCGGAGAGTAAACGG 440 Query 351 TTGCCAGAGTCGTTTAAGAAGCGATCTAGTGACCCAGCTGTTTGTAAACCCGATTTTAGC 410 ||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| ||| Sbjct 441 TTGCCAGAGTCTTTTAGGAAGCGATCTAGCGACCCGGCTGTTTGTAAACCCGATTTCAGC 500 Query 411 TCACTATCCACCGTTCTTGAGCATGTAGATTCATTGACCATTGATGAAAAGAAAACATCT 470 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 501 TCCCTATCCACTGTTCTTGAGCATGTAGATTCATTGACCATTGATGAAAAGAAAACATCT 560 Query 471 GGCTTTGGCAGTGTCAAGACCAGCTCTGCTTCAGCCAAAATGAGTGATGGTACCAGCAGT 530 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 561 GGCTTTGGCAGCGTCAAGACCAGCTCTGCTTCAGCCAAATTGAGTGATGGTACGAGCAGT 620 Query 531 CTTGGCAAGACAAGTGGTAGTGCCAAGCTAAGTGGCCGCCTTGATTTCATGGAGAGTGGC 590 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 621 CTTGGCAAGACTAGTGGAAGTGCCAAGCTAAGTGGCCGCCTTGATTTCATGGAGAGTGGC 680 Query 591 AAGAGCAGTATCTGCAGAGGAAGCACAAGCAGTGATGTCAGTGACGAGAGTAGTTGCAGC 650 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 681 AAGAGCAGTATCTGCAGAGGAAGCACAAGCAGTGATGTGAGTGACGAGAGTAGCTGCAGC 740 Query 651 AGCTTTAGCAGCACTGTCAACAAACCCCACAAGGCCAATGACTTGAGATGGGAAGCAATC 710 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 741 AGCTTTAGTAGCACTGTCAACAAACCCCACAAGGCCAATGACTTAAGATGGGAAGCAATC 800 Query 711 CAGGCTGTTAGGGTTCGGGATGGGGTTTTAGGTCTGAGCCATTTCAGGCTCCTTAAGAGG 770 ||||||||||||||||| |||||| |||||||||| || |||||||||||||||||| || Sbjct 801 CAGGCTGTTAGGGTTCGTGATGGGCTTTTAGGTCTTAGTCATTTCAGGCTCCTTAAGCGG 860 Query 771 CTAGGCTGCGGGGACATTGGGAGTGTTTATCTCTCTGAGCTTAGCGGGACTAAGTGTTAC 830 |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 861 TTAGGCTGCGGGGACATCGGGAGTGTTTATCTCTCTGAGCTGAGCGGGACTAAGTGTTAC 920 Query 831 TTTGCTATGAAGGTTATGGACAAGACATCCCTTGCCAGTCGCAAGAAGCTTCTCCGAGCT 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 921 TTTGCTATGAAGGTTATGGACAAGACATCCCTTGCCAGTCGCAAGAAGCTTCTCCGAGCT 980 Query 891 CAGACCGAAAGAGAGATTCTCCAGTCTTTGGATCATCCGTTTCTCCCTACCCTCTACACT 950 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 981 CAGACTGAAAGAGAGATTCTCCAGTCTTTGGATCATCCATTTCTCCCTACCCTCTACACT 1040 Query 951 CACTTTGAGACTGAGAAGTTCTCGTGCCTGGTGATGGAATTCTGTCCCGGAGGAGATTTG 1010 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 1041 CACTTTGAGACTGAGAAATTCTCATGCCTGGTGATGGAATTCTGTCCCGGAGGAGATTTG 1100 Query 1011 CATACTCTCAGGCAACGCCAGCCGGGGAAGCATTTTTCTGAGCAAGCCGTAAAATTTTAC 1070 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 1101 CATACTCTCAGGCAACGCCAGCCGGGGAAACATTTTTCTGAGCAAGCGGTAAAATTTTAC 1160 Query 1071 ATAGCAGAGTCATTGCTAGCTTTGGAATACCTGCACATGCTTGGGATTGTGTATCGCGAT 1130 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1161 ATAGCAGAGTCATTGTTAGCTTTGGAATACCTGCACATGCTTGGGATTGTGTATCGAGAT 1220 Query 1131 CTTAAGCCTGAAAACGTTCTAGTTCGGGAAGACGGACATATAATGCTCTCTGATTTTGAC 1190 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1221 CTTAAGCCTGAAAACGTTCTAGTTCGAGAAGACGGACATATAATGCTCTCTGATTTTGAC 1280 Query 1191 CTTTCACTCCGCTGTCTTGTCAGCCCCACTCTAGTGAAATCTGCCGCCATCGAGTCAGAT 1250 ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1281 CTTTCTCTCCGATGTCTTGTCAGCCCGACTCTAGTGAAATCTGCCGCCATCGAGTCAGAT 1340 Query 1251 CCATTACGAAAAAACGTTTACTGTGTGCAGCCCGCTTGCATTGAGCCCTCCTGCATTCAA 1310 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1341 CCTTTACGGAAAAACGTTTACTGTGTGCAGCCCGCTTGCATTGAGCCCTCCTGCATTCAA 1400 Query 1311 CCGTCTTGCACCGTCCCCACCACTTGCTTCTCCCCACGTTTGTTCTCAAGCAAATCTAAG 1370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1401 CCGTCTTGCACCGTCCCCACCACTTGCTTCTCCCCACGTTTGTTCTCAAGCAAATCTAAG 1460 Query 1371 AAGGACCGTAAACCCAAGAATGACACCGCGAATCAAGTTAGGCCGTTGCCAGAGCTGGTA 1430 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1461 AAGGACCGTAAACCCAAGAATGACACCGCAAATCAAGTTAGGCCATTGCCAGAGCTGGTA 1520 Query 1431 GCCGAGCCAACCGATGCACGGTCCATGTCATTTGTGGGCACACACGAGTACTTAGCCCCA 1490 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1521 GCCGAGCCAACCGATGCACGTTCCATGTCATTTGTGGGCACACACGAGTACTTGGCCCCA 1580 Query 1491 GAGATCATCAAAGGCGAAGGCCATGGCAGTGCAGTGGATTGGTGGACTTTTGGGATCTTC 1550 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 1581 GAGATCATCAAAGGCGAAGGGCATGGCAGTGCAGTGGATTGGTGGACTTTTGGGATATTC 1640 Query 1551 CTTTACGAGCTTCTCTTTGGGAGAACGCCTTTCAAGGGCTCAGGAAACCGACAAACACTG 1610 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1641 CTTTACGAGCTTCTCTTTGGGAGAACGCCCTTCAAGGGCTCAGGAAACCGACAAACACTG 1700 Query 1611 TTCAATGTGGTGGGTCAGCCTCTGCGGTTCCCAGAAACACCTGTGGTGAGTTTTGCAGCG 1670 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1701 TTCAATGTGGTGGGTCAGCCTCTGCGGTTCCCAGAAACGCCTGTGGTGAGTTTTGCAGCG 1760 Query 1671 AGAGACCTCATCCGGGGCTTGCTCATGAAGGAGCCGCAACAGCGGCTGGGGTTCAAACGG 1730 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1761 AGAGACCTCATCCGGGGCTTGCTCATGAAGGAGCCGCAGCAGCGGCTGGGGTTCAAACGG 1820 Query 1731 GGAGCCACTGAGGTTAAGCAGCACCCGTTCTTCGAAGGTGTGAACTGGGCTTTGATTCGG 1790 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1821 GGAGCCACTGAGGTTAAGCAGCACCCTTTCTTCGAAGGTGTGAACTGGGCTTTGATTCGG 1880 Query 1791 TGTGCGACTCCACCGGAAATCCCAAAGCCGGTTGAGCTGGAAAAGGGACCTGTGAGTGTT 1850 ||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||| Sbjct 1881 TGTGCGACTCCCCCGGAAATACCAAAGCCGGTTGAGCTGGAAAAAGGAGCTGTGAGTGTT 1940 Query 1851 GCAGAGGCACCATCAAGCCAGAAGACAGCAGCCGGTTTGGTTCTGAATGCTCAGAAAGGG 1910 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1941 GCAGAGGCACCATCAAGCCAGAAGACAGCAGCGGGTTTGGTTCTGAATGCTCAGAAAGGG 2000 Query 1911 TCTGATAACTATTTGGAATTTGATTTCTTCTAGCGTTACGGTTAGACATATGTTACTCTA 1970 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2001 TCTGATAACTATTTGGAATTTGATTTCTTCTAGCGTTACGGTTAGACATATGGTACTCTA 2060 Query 1971 TTCTTCCTTAAAAGACTCTGTGGTAAAGATGATGATCAGGTGTTGATGTTTCGCTTTTTA 2030 |||||||||| |||||| |||| |||| | ||||||||||||||||||||||||| |||| Sbjct 2061 TTCTTCCTTAGAAGACTATGTGATAAA-A-GATGATCAGGTGTTGATGTTTCGCTCTTTA 2118 Query 2031 TAGATTGTCATGAATTGTATGCTTGTTTGTATGCATAAGCTGTTGTAGTTTATAAAAATG 2090 ||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 2119 TAGATTGCCATGAATTGTAAGCTTGTTTGTATGCATAAGCTGCTGTAGTTTATAAAAATG 2178 Query 2091 TTGTAACTGTTTCTCGTAACGTTATTAGTTTTTATCAGAATTCCTTTTCACTTACTCTAT 2150 |||||||||||||||||||| ||||||||| |||||||| |||||||| ||| |||||| Sbjct 2179 TTGTAACTGTTTCTCGTAACCTTATTAGTTGTTATCAGAGTTCCTTTTTACTCGCTCTAT 2238 Query 2151 CGAATGACAAAACGCAGTAACATCAAATGTATTGTCTCTGC 2191 | || ||||||| | || ||||||||||||||||||||| Sbjct 2239 CCAAACACAAAAC--ATTA-CATCAAATGTATTGTCTCTGC 2276 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108684179925 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5