BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494238
Length=3146
Score E
Sequences producing significant alignments: (Bits) Value
AT5G47430.1 | Symbols: | DWNN domain, a CCHC-type zinc finger ... 4383 0.0
AT4G17410.3 | Symbols: | DWNN domain, a CCHC-type zinc finger ... 1347 0.0
> AT5G47430.1 | Symbols: | DWNN domain, a CCHC-type zinc finger
| chr5:19235631-19241221 REVERSE LENGTH=3300
Length=3300
Score = 4383 bits (2373), Expect = 0.0
Identities = 2796/2992 (93%), Gaps = 61/2992 (2%)
Strand=Plus/Plus
Query 191 ATCTGCAGGAACTTGTCCAGGATTCGTAGATTTGGATTGATTTTGCTACACGCGTGGAGG 250
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 334 ATCTGCAGGAACTTTTCCAGGATTCGTTGATTTGGATTGATTTTGCTACACGCGTGGA-G 392
Query 251 TTT-CTTCTGTGAAGTCGAATCAGCGAAGTAAAAATTTTCAATGGCAATTTATTACAAGT 309
||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 393 TTTCCTTCTGTGAAGTCGAATCAGCGAAATACAAATTTTCAATGGCAATTTATTACAAGT 452
Query 310 TTAAGAGTGCAAGGGATTATGATACCATTGCCATGGATGGTCCTTTTATATCCGTCGGTA 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 TTAAGAGTGCAAGGGATTATGATACCATTGCCATGGATGGTCCTTTTATATCCGTCGGTA 512
Query 370 TTCTCAAAGACAAAATTTTCGAAACTAAGCATTTGGGCACTGGTAAAGACCTTGATATTG 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 TTCTCAAAGACAAAATTTTCGAAACTAAGCATTTGGGCACTGGTAAAGACCTTGATATTG 572
Query 430 TCGTCTCCAATGCCCAAACTAATGAAGAGTATCTGGATGAAGCAATGTTAATCCCAAAGA 489
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 573 TCGTCTCCAATGCCCAAACTAACGAAGAGTATCTGGATGAAGCAATGTTAATCCCAAAGA 632
Query 490 ATACATCTGTCCTTATTCGTCGAGTTCCAGGACGCCCTCGCATCACAGTTATCACCACAC 549
|||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||
Sbjct 633 ATACATCTGTCCTTATTCGTCGGGTTCCTGGACGTCCTCGCATCACAGTTATTACCACAC 692
Query 550 CAGAGCCTAGAATCGAGAATAAAGTGGAAAACGTTCAGGCTGAAACCACCAATTTTCCTG 609
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 693 AAGAGCCTAGAATCCAGAATAAAGTGGAAGACGTTCAGGCTGAAACCACCAATTTTCCTG 752
Query 610 TTACCGATCCATCTGCCACTAAATATCCTGAAGATGATTGGGACGAGTTTGGGACTGAT- 668
|| | ||||||||||| || ||| |||||||||||| | ||||||||||||||||||
Sbjct 753 TTGCTGATCCATCTGCTGCTGAATTTCCTGAAGATGAGTATGACGAGTTTGGGACTGATC 812
Query 669 TTATATTCCATTCCTGATGCCCAAGATGCCCAGCATATTATTATTCCACGTCCTGATCTT 728
|| ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||
Sbjct 813 TT-TATTCCATTCCTGATACCCAAGATGCCCAGCATATTATT---CCACGTCCTCATCTT 868
Query 729 GCA-CCAGCAGACGAGAAAGTAGATGAAGAAAGCAAAATCCAGGCACTGATTGACACTCC 787
||| || |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 869 GCAACC-GCAGACGACAAAGTAGATGAAGAAAGCAAAATTCAGGCGCTGATTGACACTCC 927
Query 788 AGCACTTGACTGGCAAC---GACAAGGTCCAGATACTTATGGGGCTGGGAGAGGTTACGG 844
||||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||| ||
Sbjct 928 AGCACTTGACTGGCAACAACGACAAGGTCAAGATACTTTTGGAGCTGGTAGAGGTTATGG 987
Query 845 AAGGGGTATGCCTGGAAGGATGAATGGACGTGGTTTTGGAATGGAAAGGAAAACGCCACC 904
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 988 GAGGGGTATGCCTGGAAGGATGAATGGACGTGGTTTTGGAATGGAAAGGAAAACGCCACC 1047
Query 905 TCCAGGATATGTGTGCCATCGATGCAATGTCCCTGGACATTTTATTCAGCATTGCCCCAC 964
|||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1048 TCCAGGTTATGTGTGCCATCGTTGCAATATCCCTGGACATTTTATTCAGCATTGCCCCAC 1107
Query 965 AAATGGAGACCCTAACTATGATGTTAAGAGAGTTAAGCCACCTACTGGTATCCCCAAGTC 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 AAATGGAGACCCTAACTATGATGTTAAGAGAGTTAAGCCACCTACTGGTATCCCCAAGTC 1167
Query 1025 CATGTTGATGGCGACCCCTGATGGTTCTTATTCCTTGCCAAGTGGCGCAGTTGCAGTTCT 1084
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1168 CATGTTGATGGCGACCCCAGATGGTTCTTATTCCTTGCCAAGTGGCGCAGTTGCAGTTCT 1227
Query 1085 GAAACCAAATGAGGATGCTTTTGAGAAGGAAATGGAGGGATTGCCATCAACAACACGTTC 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 GAAACCAAATGAGGATGCTTTTGAGAAGGAAATGGAGGGATTGCCATCAACAACACGTTC 1287
Query 1145 TGTAGGAGAACTTCCGCCTGAGCTAAAATGCCCATTATGCAAAGAAGTAATGAAAGATGC 1204
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1288 TGTAGGAGAACTTCCACCTGAGCTAAAATGCCCATTATGCAAAGAAGTGATGAAAGATGC 1347
Query 1205 TGCGCTTACAAGCAAATGTTGTTACAAAAGCTTCTGTGACAAGTGTATCAGAGATCACAT 1264
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1348 TGCGCTTACAAGCAAATGTTGTTACAAGAGCTTCTGTGACAAGTGTATCAGAGATCACAT 1407
Query 1265 TATTTCAAAGTCAATGTGTGTTTGTGGAAGACCAGATGTACTTGCTGACGATCTTCTACC 1324
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1408 TATTTCAAAGTCAATGTGTGTTTGTGGAAGATCAGATGTACTTGCTGACGACCTTCTACC 1467
Query 1325 AAACAAGACCCTCAGGGATACCATAAACCGTATTTTGGAAGCTGGAAACGATAGCACTGA 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1468 AAACAAGACCCTCAGGGATACCATAAACCGTATTTTGGAAGCTGGAAACGATAGCACTGA 1527
Query 1385 GAACGCGGGCAGCGTTGGCCATATCCCAGATTTGGAGTCTGCACGCTGTCCACCTCCCAA 1444
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 GAATGTGGGCAGCGTTGGCCATATCCCAGATTTGGAGTCTGCACGCTGTCCACCTCCCAA 1587
Query 1445 GGCTCTATCTCCTACTACATCTGTTGCATCTAAAGGCGAGAAGAAACCAGTCCTTAGTAA 1504
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1588 GGCTCTATCTCCTACTACATCTGTTGCATCTAAAGGCGAGAAGAAACCAGTACTTAGTAA 1647
Query 1505 CAATAATGATGCTTCAACCTTAAAGCCGCCAATGTATGTTGCAGAGATCACAAGTGCCCC 1564
|||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||
Sbjct 1648 CAATAATGATGCTTCAACTTTAAAGGCGCCAATGGAAGTTGCAGAGATCACAAGTGCCCC 1707
Query 1565 TCGGGCATCTGCAGAAGTTAATGTGGGAAAA-CCAGTTGATGCATGTGAAAGCACTCAAG 1623
||| |||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||
Sbjct 1708 TCGTGCATCTGCAGAAGTGAATGTAG-AAAAGCCAGTTGATGCATGTGAAAGCACTCAAG 1766
Query 1624 GGTCCGTGATTGTGAAAGAAGCAACAGTTTCAAAGTTGAATACGCAAGCCCCCAAGGAAG 1683
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1767 GGTCCGTGATTGTGAAAGAAGCAACAGTGTCAAAGTTGAATACGCAAGCCCCCAAGGAAG 1826
Query 1684 AAGTGCAGCAGCAGGTTGCTGCTGGAGAGCCAGGaaaaaagaagaaaaaaaaaaCAAGAG 1743
|| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1827 AAATGCAGCAGCAGGTTGCTGCTGGAGAGCCAGGAAAAAAGAAGAAAAAGAAACCAAGAG 1886
Query 1744 TGCCTGGGAATGCAGACATGCAATGGAATCCTGTGCCAGATCTAGCAGGCACTGACTATA 1803
|||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1887 TGCCTGGGAATG-A--CATGCAATGGAATCCTGTGCCAGATCTAGCAGGCCCTGACTATA 1943
Query 1804 TGATGCAAATGGGACCAGGTCCGCAGTACTTCAACGGAATGCAGCCCGGTTTCAACGGCG 1863
||||||||||||||||||||||||||||||||||||| ||||| || || ||||| ||||
Sbjct 1944 TGATGCAAATGGGACCAGGTCCGCAGTACTTCAACGGCATGCAACCTGGCTTCAATGGCG 2003
Query 1864 TCCAACCAGGCTTCAACGGTGTTCAACCTGGCTTCAATGGCTTTCACCCTGGCTTTAATG 1923
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2004 TACAACCAGGCTTCAACGGTGTTCAACCTGGCTTCAATGGCTTTCACCCTGGCTTCAATG 2063
Query 1924 GATTTGGAGGCCCGTTTCCAGGCGCAATGCCTCCATTTATGGGTTACGGATTAAACGCAA 1983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2064 GATTTGGAGGCCCGTTTCCAGGCGCAATGCCTCCATTTATGGGTTACGGATTAAACCCAA 2123
Query 1984 TGGACATGGGATTTGGTGGGGGTATGAATATGATGCATCCAGATCCATTCATTGCACAAG 2043
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2124 TGGACATGGGATTTGGTGGGGGTATGAATATGATGCATCCAGATCCATTCATGGCACAAG 2183
Query 2044 GATTTGGGTTCCCTAATATACCACCACCCCATAGGGACCTAGCGGAAATGGGAAACCGAA 2103
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2184 GATTTGGGTTCCCTAATATACCACCACCCCATAGGGACCTAGCTGAAATGGGAAACCGAA 2243
Query 2104 TGAATCTCCAACGTGCTATGATGGGCAGAGATGAAGCCGAAGCTCGAAATGCTGAGATTT 2163
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 2244 TGAATCTCCAACGTGCTATGATGGGCAGAGATGAAGCCGAAGCCCGAAACGCTGAGATGT 2303
Query 2164 TAAGAAAACGCGAAAACGAGAGACGACCTGAAGGTGGGAAGATGTTTAGGGATGGAGAGA 2223
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2304 TAAGAAAACGTGAAAACGAGAGACGACCTGAAGGTGGGAAGATGTTTAGGGATGGAGAGA 2363
Query 2224 ATAGCAGAATGATGATGAACAACGGAACTTCAGCCTCGGCATCATCCATCAACCCTAATA 2283
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2364 ATAGCAGAATGATGATGAACAACGGTACTTCAGCCTCTGCATCATCCATCAACCCTAATA 2423
Query 2284 AATCTAGACAAGCCCCTCCTCCACCGACTC-ACGATTACGATCGCCGCAGACGACCGGAG 2342
||||||||||||| ||||| ||||| | || |||||||||||||||| ||||||||||||
Sbjct 2424 AATCTAGACAAGCACCTCCACCACCAA-TCCACGATTACGATCGCCGGAGACGACCGGAG 2482
Query 2343 A-GAT--TATCCCCAGAGCATCCGCC-ACCGCGTAAAATCATCTCTCCGTCACGCGATTC 2398
| || ||||||||||||||||||| || |||||||| ||| || ||||| ||||| ||
Sbjct 2483 AAGAGACTATCCCCAGAGCATCCGCCTAC-GCGTAAAAACATTTCCCCGTCTCGCGACTC 2541
Query 2399 CAAGAGAAAATCTGAGCGTTATCCTGACGAACGAGATCGTCACCGCGACCGTGAAAGGTC 2458
|||||||||||| |||||||||||||| ||||||||||| || ||||||||||| |||||
Sbjct 2542 CAAGAGAAAATCCGAGCGTTATCCTGATGAACGAGATCGGCAACGCGACCGTGAGAGGTC 2601
Query 2459 TCGTCACCAAGATCTT-GATCGTGAACACGACCGCACTCGCGACCGTCGCGATGAAGATA 2517
||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 2602 ACGTCACCAAGA-CGTAGATCGTGAACACGACCGTACTCGCGACCGTCGCGATGAAGACA 2660
Query 2518 GAAGCCGAGAACATCGTCACCACCGTGGTGAATCCGAACGCAACCAACATCATCACCACC 2577
|||||||||| ||||| ||||||||||||||| ||||||||| ||||||||| | | |||
Sbjct 2661 GAAGCCGAGATCATCGCCACCACCGTGGTGAAACCGAACGCAGCCAACATCA-C-C-ACC 2717
Query 2578 GTAAGAGATCGGAACCTCCGTCGTCGGAGCCACCAGGCACTGCCGGAACTAAAGCAGAGA 2637
| |||||||||||||| || || ||||||||||||| | |||| | ||||||||||||
Sbjct 2718 GCAAGAGATCGGAACCGCCTTCATCGGAGCCACCAGTCCCTGCT--A-CTAAAGCAGAGA 2774
Query 2638 TCGATAATAGTCACAAGTCAAGCGTATTCGCTCGGATAAGTTTCCCGGAGGAAGAAACAT 2697
|||| |||| || ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 2775 TCGAGAATAATCTTAAGTCTAGCGTATTCGCTCGGATAAGTTTTCCGGAGGAAGAAACAT 2834
Query 2698 CGTCTGGTAAACGAAGAAAGGTTTCTTCGTCTTCTTCCACTTCTGTGACGGATCCATCTG 2757
| |||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||
Sbjct 2835 CTTCTGGTAAACGAAGAAAGGTGCCTTCCTCTTCTTCTACTTCTGTTACGGATCCATCTG 2894
Query 2758 CTAC-G-----GCCG---------TGGGAACATCAATTCACCGTCACAGTAGTCGGAAGG 2802
|| | | |||| ||||||||||| ||||||| ||||||||||||||||
Sbjct 2895 CTTCCGCCTCTGCCGCAGCCGCCGTGGGAACATCAGTTCACCGACACAGTAGTCGGAAGG 2954
Query 2803 AAATAGAAGTAGCAGATTATGAATCGAGCGACGAAGATAGGCATTTCAAGAGGAAGAAGC 2862
||||||||||||||||||||||||| || || |||||||||||||||||||||||| |
Sbjct 2955 AAATAGAAGTAGCAGATTATGAATCTAGTGATGAAGATAGGCATTTCAAGAGGAAG---C 3011
Query 2863 CATCAAGGTACGAGCGATCACCACCGGCGGTGGTTAGTGATGTGAGTGAAGATAAACACC 2922
| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 3012 CGTCAAGGTACGCGCGATCACCACCGGTGGTGGTTAGTGATGTGAGTGAAGATAAACTCC 3071
Query 2923 GATACTCCAAACGTGGAAAGGGAGAGAGATCTCGAGCTTGATTTGGAtttt------t-t 2975
||||||| |||||||||||||| |||||||||||||||||| |||||||| | |
Sbjct 3072 GATACTCAAAACGTGGAAAGGGGGAGAGATCTCGAGCTTGACATGGATTTTCAAACATGT 3131
Query 2976 tgttttttttttttGTATAATGAAAAACAGATGA-TGAGAATCTTCTTGTTTTACTGTAA 3034
| ||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||||
Sbjct 3132 TTTTTTTTTTTTTTGTATAATCAAAAACAGA-GAATGAGAATCTTCTTGTTTTGCTGTAA 3190
Query 3035 CGAACAAAGCAGAGAGAGCTCTTTTGTCATCGAATGCttttttaatttttGTAGTGGAAT 3094
||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 3191 CGAACAAAG-AGAGAGAGTTCTTTTGTCATCGAATTCTTTTTTAATTTTTGTAGTGGAAT 3249
Query 3095 TCGATTTCGTAACTACTTTATTCTTAAATCTTTGAGACCAGTGAATTTACAG 3146
||||||||||||||||||||||||||| ||| ||||||||| ||||||||||
Sbjct 3250 TCGATTTCGTAACTACTTTATTCTTAA-TCTATGAGACCAGCGAATTTACAG 3300
Score = 193 bits (104), Expect = 1e-47
Identities = 142/159 (89%), Gaps = 8/159 (5%)
Strand=Plus/Plus
Query 1 TCTGGTGTCCAAACCCTAGATTTCGAGATCGATCTATCTTCTTTCTCGTGAAGACACCG- 59
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 29 TCTTGTGTCCAAACCCTAGATTTCAAGATCGATCTATCTTCTTTCTCGTGAAGACACCGC 88
Query 60 -CTCTGCTCGATTCGTATGATTACTCTCTAGATCCTTTTCAATTTCCCCCGGAA-GGTCT 117
|||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct 89 TCTCTACTCGATTCCTATGATTACTCTCTAGATCCTTTTCAATTTCCCCCCGAAAGGT-T 147
Query 118 TCCCT-TTTCTACAACCCC-AAATCGGAGCTTGGAGCTA 154
|| | ||| | | |||| |||||||||||||||||||
Sbjct 148 TCTCGATTT-TG-ATCCCCCAAATCGGAGCTTGGAGCTA 184
> AT4G17410.3 | Symbols: | DWNN domain, a CCHC-type zinc finger
| chr4:9715761-9721700 FORWARD LENGTH=3141
Length=3141
Score = 1347 bits (729), Expect = 0.0
Identities = 1728/2184 (79%), Gaps = 174/2184 (8%)
Strand=Plus/Plus
Query 289 CAATGGCAATTTATTACAAGTTTAAGAGTGCAAGGGATTATGATACCAT-TGCCATGGAT 347
|||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||||
Sbjct 598 CAATGGCAATATATTACAAGTTTAAGAGTGCGAGGGATTATGATACCATCT-CCATGGAT 656
Query 348 GGTCCTTTTATATCCGTCGGTATT-CTCAAAGACAAAATTTTCGAAACTAAGCATTTGGG 406
|||||||||||| | || ||| || |||||||| ||||||| ||||||||||||||||||
Sbjct 657 GGTCCTTTTATAACAGTTGGT-TTACTCAAAGAAAAAATTTACGAAACTAAGCATTTGGG 715
Query 407 CACTGGTAAAGACCTTGATATTGTCGTCTCCAATGCCCAAACTAATGAAGAGTATCTGGA 466
| ||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||
Sbjct 716 AAGTGGTAAAGACCTTGACATTGTCATCTCTAATGCCCAAACTAATGAAGAATATCTGGA 775
Query 467 TGAAGCAATGTTAATCCCAAAGAATACATCTGTCCTTATTCGTCGAGTTCCAGGACGCCC 526
||||||||||||||| ||||| ||||| ||||| || ||||| || || || ||||||||
Sbjct 776 TGAAGCAATGTTAATACCAAAAAATACTTCTGTGCTAATTCGCCGGGTCCCTGGACGCCC 835
Query 527 TCGCATCACAGTTATCACCACACCAGAGCCTAGAATCGAGAATAAAGTGGAAAACGTTCA 586
|||||||| | |||| |||| | |||||| ||| ||||| |||||||||||||||||||
Sbjct 836 TCGCATCAGAATTATTACCAGAGAAGAGCCGAGAGTCGAGGATAAAGTGGAAAACGTTCA 895
Query 587 GGCTGAAACCACCAATTTTCCTGTTACCGATCCATCTGCCACTAAATATCCTGAAGATG- 645
||||| | | |||| || | | | ||| ||||| || | | ||||||||
Sbjct 896 AGCTGATATGAACAATGTTATTACTGCTGATGCATCT-CC-C-----GT--TGAAGATGA 946
Query 646 ATTGGGACGAGTTTGGGACTGATTTATATTCCATTCCTGATGCCCAAG-ATGCCCAGCAT 704
||| || |||||||||| |||||| ||||| ||||||||||||| || | | | |||
Sbjct 947 ATT-CGATGAGTTTGGGAATGATTTGTATTCAATTCCTGATGCCCCAGCA-G-TC--CAT 1001
Query 705 AT-TATTATTCC-ACGTCCTGA-TCTTGCACCAGCAGACGAGAAAGTAGATGAAGAAAGC 761
| || || || | ||| ||| || |||| | ||| | | | | |||||||||| |
Sbjct 1002 -TCTAATA-ACCTATGTCATGATTC-TGCA-C--CAG-C-TG--A-T-GATGAAGAAACC 1049
Query 762 AAAATCCAGGCACTGATTGACACTCCAGCACTTGACTGGCAACGACAAGGTCCAGATACT 821
|| | ||||| | ||||||||||||||||| |||||||| | ||||||| |||||| |
Sbjct 1050 AAGCTAAAGGCATTAATTGACACTCCAGCACTAGACTGGCATCAACAAGGTGCAGATAGT 1109
Query 822 TATGGGGCTGGG-AGAGGTTACGGAAGGGGTATGCCTGGAAGGATGAATGGACGTGGTTT 880
| | || | ||| |||||||| || ||||||||| ||||||||||| ||| || |||||
Sbjct 1110 T-TTGGCCCGGGTAGAGGTTATGGGAGGGGTATGGCTGGAAGGATGGGTGGCCGCGGTTT 1168
Query 881 TGGAATGGAAAGGAAAACGCCACCTCCAGGATATGTGTGCCATCGATGCAATGTCCCTGG 940
||||||||| |||| ||| || || ||||| ||||| |||||||| |||||||| ||||
Sbjct 1169 TGGAATGGAGAGGACAACACCGCCACCAGGCTATGTTTGCCATCGGTGCAATGTTTCTGG 1228
Query 941 ACATTTTATTCAGCATTGCCCCACAAATGG-AGACCCTAACTATGATGTTAAGAGAGTTA 999
|||||||||||| || ||| ||||||| || | | ||||||| |||||||||||||||||
Sbjct 1229 ACATTTTATTCAACACTGCTCCACAAACGGTA-ATCCTAACTTTGATGTTAAGAGAGTTA 1287
Query 1000 AGCCACCTACTGGTATCCCCAAGTCCATGTTGATGGCGACCCCTGATGGTTCTTATTCCT 1059
| ||||||||||||||||||||||| ||| ||||||| ||||| |||| ||||| ||||
Sbjct 1288 AACCACCTACTGGTATCCCCAAGTCGATGCTGATGGCAACCCCAAATGGCTCTTACTCCT 1347
Query 1060 TGCCAAGTGGCGCAGTTGCAGTTCTGAAACCAAATGAGGATGCTTTTGAGAAGGAAATGG 1119
|||||||||||||||| |||||| | |||||||| |||||||| ||||||||||||||||
Sbjct 1348 TGCCAAGTGGCGCAGTAGCAGTTTTAAAACCAAACGAGGATGCGTTTGAGAAGGAAATGG 1407
Query 1120 AGGGATTGCCATCAACAACACGTTCTGTAGGAGAACTTCCGCCTGAGCTAAAATGCCCAT 1179
|||||||| ||||||||||||| || || || ||| |||| ||||| ||||||||||||
Sbjct 1408 AGGGATTGACATCAACAACACGATCAGTCGGGGAATTTCCTCCTGAATTAAAATGCCCAT 1467
Query 1180 TATGCAAAGAAGTAATGAAAGATGCTGCGCTTACAAGCAAATGTTG-TTACAAAAGCTTC 1238
| || |||||||| |||| ||||||||| || |||||||||| || | ||| |||| |
Sbjct 1468 TGTGTAAAGAAGTGATGAGAGATGCTGCACTGGCAAGCAAATGCTGCCT-CAAGAGCTAC 1526
Query 1239 TGTGACAAGTGTATCAGAGATCACATTATTTCAAAGTCAATGTGTGTTTGTGGAAG-ACC 1297
|||||||||||||| ||||||||||| ||| |||||||||||||||||||||| || | |
Sbjct 1527 TGTGACAAGTGTATTAGAGATCACATCATTGCAAAGTCAATGTGTGTTTGTGG-AGCAAC 1585
Query 1298 AGATGTACTTGCTGACGATCTTCTACCAAACAAGACCCTCAGGGATACCATAAACCGTAT 1357
|||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||| ||
Sbjct 1586 TCATGTCCTAGCTGATGATCTTCTACCTAACAAAACCCTAAGGGATACTATAAACCGGAT 1645
Query 1358 TTTGGAAG-CTGGAAACGA-TAGCACTGAGAACGCGGGCAGCGTTG-GCCATA-TCCCAG 1413
|||| || |||| ||| | ||| |||||||||| |||||| || | || | ||| ||
Sbjct 1646 ATTGG-AGTCTGGTAAC-AGTAGTGCTGAGAACGCTGGCAGC-ATGTGTCA-AGTCCAAG 1701
Query 1414 ATTTGGAGTCTGCACGCTGTCCACCTCCCAAGGCTCTATCTCCTACTACATCTGTTGCAT 1473
|| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1702 ATATGGAGTCTGTACGGTGTCCACCTCCCAAGGCTCTATCTCCTACTACATCTGCTGCAT 1761
Query 1474 CTAAAGGCGAGAAGAAACCAG-TCCTTAGTAACAATAATGATG-CTTCAAC-CTTAAAGC 1530
|| |||||| |||||||||| |||| |||||||| ||||| | ||||||| || |||||
Sbjct 1762 CTGGAGGCGAAAAGAAACCAGCTCCT-AGTAACAACAATGA-GACTTCAACTCT-AAAGC 1818
Query 1531 CGCCAAT-GTATGTTGCAGAGATCACAAGTGCCCCTCGGGCATCTGCAGAA---GTTAAT 1586
|| |||| | | | ||||||||||||||||| | |||| ||||||||| |||||
Sbjct 1819 CGTCAATAGAAA-TAGCAGAGATCACAAGTGCT--T-GGGCGTCTGCAGAAATAGTTAAA 1874
Query 1587 GTGGGAAAA-CCAGTTGATGCATGTG-AAAGCACTCAAGGGTCCGTGAT-TGTGAAAG-A 1642
|||| |||| ||||||||||||| || ||| || |||||| ||| | | || | ||| |
Sbjct 1875 GTGG-AAAAGCCAGTTGATGCATCTGCAAA-CATTCAAGGATCC-TCAAATG-GCAAGGA 1930
Query 1643 AGCAACAGTTTCA-AAGTTGAATACGCAAGCCCCC-AAGGAAGAAGTGCAGCAGCAGGTT 1700
|||| |||||||| || | ||||||||| |||||| ||||||||| ||| ||||||||||
Sbjct 1931 AGCAGCAGTTTCACAACT-GAATACGCA-GCCCCCCAAGGAAGAAATGCCGCAGCAGGTT 1988
Query 1701 GCTGCTGGAGAGCCAGGaaaaaagaagaaaaaaaaaaCAAGAGTGCCTGGGAATGCAGAC 1760
||| |||| |||| || | ||| ||| || || || || | ||| ||| || ||
Sbjct 1989 GCTTCTGGGGAGCAAGCAGGAAA-AAGGAAGAAGAAG-AA-A---CCTCGGA-TG-AG-- 2038
Query 1761 ATGCAATGGAATCCTGTGCCAGATCTAGCAGGCACTGACTATATGATGCAAATGGGACCA 1820
|| | || || | | |||||||||| ||||||||||||||| ||||| |||
Sbjct 2039 -TG----G-AA-CC-G----A--TCTAGCAGGCCCTGACTATATGATGCCCATGGGCCCA 2084
Query 1821 GGTCC-G-----CAGTACTTCAACGGAATGCAGCCCGGTTTCAACGGCGTCCAACCA-GG 1873
||||| | ||||||||||| || | || ||||| ||||||||||| |||| | ||
Sbjct 2085 GGTCCCGGTAATCAGTACTTCAATGGTTTCCAACCCGGCTTCAACGGCGTTCAAC-ATGG 2143
Query 1874 CTTCAACGGTGTTCAACCTGGCTTCAATGGCTTTCACCCTGGCTTT-AATGGATTTGGAG 1932
||||| || ||||||||||| |||||||||||||| | ||| ||| ||||| ||| ||
Sbjct 2144 GTTCAATGGCGTTCAACCTGGGTTCAATGGCTTTCATCATGG-TTTCAATGGGTTTCCAG 2202
Query 1933 GCCCGTTTCCAGGCGCAATGCCTCCATTTATGGGTTACGGATTAAACGCAATGGACATGG 1992
|||| ||||| || || |||||||| ||| || || || | | | |||
Sbjct 2203 GCCCTTTTCCTGGTGCGATGCCTCC-TTT-TG--TT--GG------C----T--A--TGG 2242
Query 1993 GATTTGGTGGGGGTATGAATATGATGCATCCAGATCCATTCATTGCACAAGGATTTGGGT 2052
|||||| || | | | ||| ||||||||||| ||| |||||| || |||||||
Sbjct 2243 -ATTTGGCGG---T--G--T--GATCCATCCAGATCCTTTCGCTGCACAGGGCTTTGGGT 2292
Query 2053 TCCCTAATATACCACCACCCCATAGGGACCTAGCGGAAATGGGAAACCGAATGAATCTCC 2112
||||||||||||||||||| |||||||||| ||||| ||||| || || ||||||||||
Sbjct 2293 TCCCTAATATACCACCACCTTATAGGGACCTTGCGGAGATGGGGAATCGTATGAATCTCC 2352
Query 2113 AACGTGCTATGATGGGCAGAGATGAAGCCGAAGCTC-GAAATGCTGAGATTTTAAGAAAA 2171
| | | |||| ||||| ||||| ||| |||||| |||| ||||||| ||||||
Sbjct 2353 AGCATCCTATAATGGGGAGAGAAGAATTTGAAGCTAAGAAAA-CTGAGATGAAAAGAAAG 2411
Query 2172 CGCGAAAACGAGA---GACGACCTGAAGGTGGGAA-GAT-GTTTAGGGATGGAGAGAATA 2226
|| |||||||||| ||||| | ||||| ||||| | | || ||||| | || || |
Sbjct 2412 CGTGAAAACGAGATTCGACGATCGGAAGGAGGGAATG-TCGTC-AGGGACAGTGAAAAGA 2469
Query 2227 GCAGAATGATGATGAACAAC--GGAACTTCAGCCTCGGCATCATCCATCAACCCTAATAA 2284
||||||| | ||||||||| || | | || | || | ||| || | || || || ||
Sbjct 2470 GCAGAAT-A--ATGAACAACTCGGCAGT-CA-CTTC--C-TCACCCGTGAAGCC-AA-AA 2519
Query 2285 ATCTAGACAAGCCCCTCCTCCACCGACT-CA-C-GATTACGATCGCCGCAGACGACCGGA 2341
|||||||||| ||||| || |||| | | | |||||||| || ||||| ||| ||||
Sbjct 2520 -TCTAGACAAGGACCTCCGCCGCCGATTTCGTCTGATTACGACCGTCGCAGGCGATCGGA 2578
Query 2342 GAGATTATCCCCAGAGCATCCGCCACCGCGTAAAAT-CATCTCTCCGTCACGCGAT--TC 2398
|||| || || |||| || | || | || || | || |||||| || | |||| ||
Sbjct 2579 TAGATCGTCACCGGAGCGTCAGTCATCTCG-AAGGTTCACCTCTCC-TC-CTCGATCATC 2635
Query 2399 CAAG-AGAAAATCTGAGCGTTATC 2421
|| | || |||||||||||| |||
Sbjct 2636 CA-GCAGGAAATCTGAGCGTGATC 2658
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156470695217
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5