BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494254 Length=830 Score E Sequences producing significant alignments: (Bits) Value AT5G47220.1 | Symbols: ATERF2, ATERF-2, ERF2 | ethylene respons... 680 0.0 AT4G17500.1 | Symbols: ATERF-1, ERF-1 | ethylene responsive ele... 316 2e-85 AT2G44840.1 | Symbols: ATERF13, EREBP, ERF13 | ethylene-respons... 119 5e-26 AT4G17490.1 | Symbols: ATERF6, ERF-6-6, ERF6 | ethylene respons... 115 6e-25 > AT5G47220.1 | Symbols: ATERF2, ATERF-2, ERF2 | ethylene responsive element binding factor 2 | chr5:19171862-19172823 REVERSE LENGTH=962 Length=962 Score = 680 bits (368), Expect = 0.0 Identities = 492/546 (90%), Gaps = 31/546 (6%) Strand=Plus/Plus Query 305 GAAGCATTACAGAGGAGTGAGACAGAGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGA 364 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct 411 GAAGCATTACAGAGGAGTGAGGCAGAGACCGTGGGGGAAATTCGCGGCGGAGATACGTGA 470 Query 365 TCCGGCGAAGAATGGAGCTAGGGTTTGGTTAGGGACGTTTGAGACGGCGGAAGATGCGGC 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 TCCGGCGAAGAATGGAGCTAGGGTTTGGTTAGGGACGTTTGAGACGGCGGAAGATGCGGC 530 Query 425 TTTAGCTTACGATAGAGCAGCTTTTAGGATGCGTGGTTCCCGCGCTTTGTTGAATTTTCC 484 |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 531 TTTAGCTTACGATATAGCTGCTTTTAGGATGCGTGGTTCCCGCGCTTTATTGAATTTTCC 590 Query 485 GTTGAGGGTTAATTCCGGTGAACCTGACCCGGTTCGGATCACGTCTAAGAGAtcttcttc 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 591 GTTGAGGGTTAATTCCGGTGAACCTGACCCGGTTCGGATCACGTCTAAGAGATCTTCTTC 650 Query 545 ttcgtcgtcttcgtcgtcttcgtcgtcttcttcgtcttcgtctGAAAACGGGAAGTTGAA 604 |||||||| |||||||| | || | | || |||| ||||||||||||||||||||||| Sbjct 651 GTCGTCGTCGTCGTCGTC--C-TC-T-T-CTACGTCGTCGTCTGAAAACGGGAAGTTGAA 704 Query 605 ACGGAGGAGAAAAGCAGAGAATCTGACGTCGGAGGTG----A----A-GTGTGAGGTTGG 655 ||| ||||||||||||||||||||||||||||||||| | | |||||||||||| Sbjct 705 ACGAAGGAGAAAAGCAGAGAATCTGACGTCGGAGGTGGTGCAGGTGAAGTGTGAGGTTGG 764 Query 656 TGAAGAGACACGTGTTGATGAGTTATTGGTTTCATAAGTTTTGATTTTGTGTGTTTTGTA 715 ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 765 TGATGAGACACGTGTTGATGAGTTATTGGTTTCATAAGTTT-GATCTTGTGTGTTTTGTA 823 Query 716 GTTGAATAGTTTTGCTATAAATGTTGAGGCG--A-GTAAA-GTGTTTCCCCTGATGTAAA 771 |||||||||||||||||||||||||||||| | ||||| ||||| ||| ||||||||| Sbjct 824 GTTGAATAGTTTTGCTATAAATGTTGAGGCACCAAGTAAAAGTGTT-CCCGTGATGTAAA 882 Query 772 TTACTATA-TAATATCAAA-C-AGAGC-CATC--TCTATAA-CTAAATAGACACTTTAAT 824 ||| | || ||| | || | | | | | || || |||| | |||||||||||||||| Sbjct 883 TTAGT-TACTAA-A-CAGAGCCATATATCTTCAATCCATAAACAAAATAGACACTTTAAT 939 Query 825 AAAGCC 830 |||||| Sbjct 940 AAAGCC 945 Score = 398 bits (215), Expect = 6e-110 Identities = 290/323 (90%), Gaps = 17/323 (5%) Strand=Plus/Plus Query 1 TAGTTTCTCTGAAAATGTACGGACAGTGCGATATAGAATCCGACTACGCTTTGTTGGAGT 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 56 TAGTTTCTCTGAAAATGTACGGACAGTGCAATATAGAATCCGACTACGCTTTGTTGGAGT 115 Query 61 CGATAACACGTCACTTGCTAGGAGGAGGAG-AGA-A-CGAGCTGCGACTCAATGAGTCGA 117 |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| | Sbjct 116 CGATAACACGTCACTTGCTAGGAGGAGGAGGAGAGAACGAGCTGCGACTCAATGAGTCAA 175 Query 118 CACCGAGTTCGTGTTTCACAGA---TT-------T--GCCGTTGAAAGAGAATGATTCAG 165 |||||||||||||||||||||| || | ||| ||||||||||||||||||| Sbjct 176 CACCGAGTTCGTGTTTCACAGAGAGTTGGGGAGGTTTGCCATTGAAAGAGAATGATTCAG 235 Query 166 AGGATATGTTAGTCTACGGACTCATCAAAGACGCCTTCCATTGTGACACGTCATCATCAG 225 |||| ||||| || ||||||||| ||||||| |||||||||| ||||||||||||||| | Sbjct 236 AGGACATGTTGGTGTACGGACTCCTCAAAGATGCCTTCCATTTTGACACGTCATCATCGG 295 Query 226 ACTTGAGCTGTCTTTTTGATTTTCCGGCGGTTAAAGTTGAGCCGACGGAGACCTTTGA-G 284 ||||||||||||||||||||||||||||||||||||| ||||| || |||| |||| | | Sbjct 296 ACTTGAGCTGTCTTTTTGATTTTCCGGCGGTTAAAGTCGAGCCAACTGAGAACTTT-ACG 354 Query 285 GTGGTGGAGGAGAAACCAAAGAA 307 | | ||||||||||||||||||| Sbjct 355 GCGATGGAGGAGAAACCAAAGAA 377 > AT4G17500.1 | Symbols: ATERF-1, ERF-1 | ethylene responsive element binding factor 1 | chr4:9759325-9760340 FORWARD LENGTH=1016 Length=1016 Score = 316 bits (171), Expect = 2e-85 Identities = 223/249 (90%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 306 AAGCATTACAGAGGAGTGAGACAGAGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGAT 365 |||||||| |||||||||||||| ||||||||||||||||| ||||||||||| | || Sbjct 516 AAGCATTATAGAGGAGTGAGACAAAGGCCGTGGGGGAAATTTGCGGCGGAGATTAGAGAC 575 Query 366 CCGGCGAAGAATGGAGCTAGGGTTTGGTTAGGGACGTTTGAGACGGCGGAAGATGCGGCT 425 ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 576 CCGGCGAAGAACGGAGCTAGGGTTTGGTTAGGAACGTTTGAGACGGCGGAGGACGCGGCG 635 Query 426 TTAGCTTACGATAGAGCAGCTTTTAGGATGCGTGGTTCCCGCGCTTTGTTGAATTTTCCG 485 || |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 636 TTGGCTTACGACAGAGCTGCTTTCAGGATGCGTGGTTCCCGCGCTTTGTTGAATTTTCCG 695 Query 486 TTGAGGGTTAATTCCGGTGAACCTGACCCGGTTCGGATCACGTCTAAGAGAtcttcttct 545 ||||| |||||||| || ||||| ||||||||||| |||| ||| ||||||||||||| | Sbjct 696 TTGAGAGTTAATTCAGGAGAACCCGACCCGGTTCGAATCAAGTCCAAGAGATCTTCTTTT 755 Query 546 tcgtcgtct 554 || || ||| Sbjct 756 TCTTCTTCT 764 > AT2G44840.1 | Symbols: ATERF13, EREBP, ERF13 | ethylene-responsive element binding factor 13 | chr2:18495341-18496272 FORWARD LENGTH=932 Length=932 Score = 119 bits (64), Expect = 5e-26 Identities = 118/144 (82%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 308 GCATTACAGAGGAGTGA-GACAGAGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGATC 366 ||| ||||||||||||| || |||||||||||||||||||||||||||||| | |||| Sbjct 369 GCAGTACAGAGGAGTGAGGA-GGAGGCCGTGGGGGAAATTCGCGGCGGAGATTAGGGATC 427 Query 367 CGGCGAAGAATGGAGCTAGGGTTTGGTTAGGGACGTTT-GAGACGGCGGAAGATGCGGCT 425 || |||||| ||||||||||||||| | ||||| || |||||| |||| || ||||| Sbjct 428 CGAAGAAGAACGGAGCTAGGGTTTGGCTCGGGAC-TTACGAGACGCCGGAGGACGCGGCG 486 Query 426 TTAGCTTACGATAGAGCAGCTTTT 449 | || ||||| |||| || ||| Sbjct 487 GTGGCGTACGACCGAGCGGCGTTT 510 > AT4G17490.1 | Symbols: ATERF6, ERF-6-6, ERF6 | ethylene responsive element binding factor 6 | chr4:9752824-9753867 REVERSE LENGTH=1044 Length=1044 Score = 115 bits (62), Expect = 6e-25 Identities = 124/153 (81%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 303 AAGAAGCATTACAGAGGAGTGA-GACAGAGGCCGTGGGGGAAATTCGCGGCGGAGATCCG 361 |||| ||||||||||||||||| || |||||||||||||||||||||||||||||| || Sbjct 446 AAGAGGCATTACAGAGGAGTGAGGA-TGAGGCCGTGGGGGAAATTCGCGGCGGAGATTCG 504 Query 362 TGATCCGGC--GAAGAATGGAGCTAGGGTTTGGTTAGGGACGTTTGAGACGGCGGAA-GA 418 || ||| | | | |||| || | |||||| | |||||||||||||||||| | || Sbjct 505 AGACCCGACTCGTCG--TGGAACTCGTGTTTGGCTCGGGACGTTTGAGACGGCG-ATCGA 561 Query 419 TGCGGCTTTAGCTTACGATAGAGCAGCTTTTAG 451 |||||| ||||||||| | || ||| ||||| Sbjct 562 AGCGGCTAGAGCTTACGACAAAGAAGCGTTTAG 594 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40438488335 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5