BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494266 Length=984 Score E Sequences producing significant alignments: (Bits) Value AT5G47120.1 | Symbols: ATBI-1, BI-1, ATBI1, BI1 | BAX inhibitor... 1269 0.0 AT4G17580.1 | Symbols: | Bax inhibitor-1 family protein | chr4... 307 1e-82 > AT5G47120.1 | Symbols: ATBI-1, BI-1, ATBI1, BI1 | BAX inhibitor 1 | chr5:19136023-19137942 FORWARD LENGTH=1149 Length=1149 Score = 1269 bits (687), Expect = 0.0 Identities = 792/843 (94%), Gaps = 5/843 (1%) Strand=Plus/Plus Query 1 AATATCTTCGTTAATCGATTCTCAAAGTCAAGCaaaaaaaaaaaaCGAAACAATGGATGC 60 ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1 AATATTTTCATTAATCGATTCTCAAAGTCAAGC----AAAAAAAACGAAACAATGGATGC 56 Query 61 GTTCTCTTCCTTCTTCGATTCTCAACCTGGTAGCAGAAGCTGGAGCTATGATTCTCTTAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 GTTCTCTTCCTTCTTCGATTCTCAACCTGGTAGCAGAAGCTGGAGCTATGATTCTCTTAA 116 Query 121 AAACTTCCGTCAGATTTCTCCCGCCGTTCAGAATCATCTTAAACGGGTTTATCTCACGTT 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||| | || || Sbjct 117 AAACTTCCGTCAGATTTCTCCAGCCGTTCAGAATCATCTTAAACGGGTTTATTTGACCTT 176 Query 181 ATGCTGTGCTCTTGTTGCATCTGCGTTTGGAGCTTATCTTCATGTGCTCTGGAATATTGG 240 ||| ||||||||||| || ||||| ||||||||||| || ||||||||||||||||| || Sbjct 177 ATGTTGTGCTCTTGTGGCGTCTGCCTTTGGAGCTTACCTCCATGTGCTCTGGAATATCGG 236 Query 241 CGGTATTCTTACAACGATTGGATGCGTTGGAACTATGATTTGGCTCCTTTCTTGTCCTCC 300 |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 237 CGGTATTCTTACAACGATTGGATGTATTGGAACTATGATTTGGCTCCTTTCATGTCCTCC 296 Query 301 TTATGAACAACAAAAGAGACTTTCTCTTCTGTTTGTGTCTGCTGTTCTTGAAGGTGCTTC 360 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 297 TTATGAACACCAAAAAAGGCTTTCTCTTCTGTTTGTGTCTGCTGTTCTTGAAGGTGCTTC 356 Query 361 TGTTGGGCCCTTGATCAAAGTGGCAATTGATGTTGACCCAAGCATCCTTATTACTGCATT 420 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 357 TGTTGGCCCCTTGATCAAAGTGGCAATTGATGTTGACCCAAGCATCCTTATCACTGCATT 416 Query 421 TGTTGGAACTGCAATAGCGTTTGTCTGTTTCTCGGCTGCAGCAATGTTAGCAAGACGCAG 480 |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 417 TGTTGGAACTGCGATAGCGTTTGTCTGTTTCTCAGCAGCAGCAATGTTAGCAAGACGCAG 476 Query 481 GGAGTATCTCTACCTTGGAGGACTACTTTCATCTGGCTTGTCCATGCTAATGTGGCTTCA 540 |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct 477 GGAGTATCTCTACCTTGGAGGACTGCTTTCATCTGGCTTGTCTATGCTAATGTGGCTCCA 536 Query 541 GTTTGCCTCTTCGATCTTTGGTGGCTCTGCATCTATCTTTAAGTTTGAGTTGTACTTTGG 600 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 GTTTGCCTCTTCAATCTTTGGTGGCTCTGCATCTATCTTTAAGTTTGAGTTGTACTTTGG 596 Query 601 ACTCTTGATCTTTGTGGGATACATGGTGGTGGATACACAGGAGATTATAGAGAAGGCACA 660 ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct 597 ACTTTTGATCTTTGTGGGATACATGGTGGTGGACACACAAGAGATTATAGAAAAGGCACA 656 Query 661 CCTCGGCGACATGGACTACGTGAAACATTCATTGACCCTTTTCACCGACTTTGTAGCTGT 720 |||||| ||||||||||| || |||||||| |||||||||||||| |||||||||||||| Sbjct 657 CCTCGGTGACATGGACTATGTAAAACATTCGTTGACCCTTTTCACTGACTTTGTAGCTGT 716 Query 721 GTTCGTTCGGATTCTCATCATAATGTTGAAGAACTCGGCAGATaaagaagagaagaagaa 780 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 717 GTTTGTTCGGATTCTCATCATAATGTTGAAGAACTCAGCAGATAAAGAAGAGAAGAAGAA 776 Query 781 gaaaaggagaaaCTGAGGCGATGTAA-GTAGATAGAACTTTATGGTGGTCATCGTGTTTG 839 |||||||||||||||||| ||||||| ||| || ||||||||||| || ||||||| || Sbjct 777 GAAAAGGAGAAACTGAGGGGATGTAAAGTAAATTTAACTTTATGGTTGTTATCGTGTGTG 836 Query 840 GCC 842 ||| Sbjct 837 GCC 839 Score = 187 bits (101), Expect = 2e-46 Identities = 130/144 (90%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 843 TTTCCACTAAAAAGGATTTGCTTGTTCCTCTTCTGCACAAATATCACCTTCAGATTGTAA 902 ||||||||||||||||| |||||||| | ||||||||||| || || ||||||||||||| Sbjct 888 TTTCCACTAAAAAGGATCTGCTTGTTTCACTTCTGCACAAGTACCATCTTCAGATTGTAA 947 Query 903 ATGACTCGAGTGTTGTTGTTCTTTTC-TAAACTTT-GTTGTTTAAGAGTTTGGTACTACT 960 ||||||||||||||||| |||||||| |||||||| ||| |||||||||||||| ||||| Sbjct 948 ATGACTCGAGTGTTGTTCTTCTTTTCATAAACTTTTGTTCTTTAAGAGTTTGGTTCTACT 1007 Query 961 AATTTCATCTTATCAAGCTAAGAA 984 ||| ||||||| ||||||||||| Sbjct 1008 GATTGCATCTTACCAAGCTAAGAA 1031 > AT4G17580.1 | Symbols: | Bax inhibitor-1 family protein | chr4:9789789-9791145 REVERSE LENGTH=744 Length=744 Score = 307 bits (166), Expect = 1e-82 Identities = 434/559 (78%), Gaps = 36/559 (6%) Strand=Plus/Plus Query 170 TATCTCACGTTATGCTGTGCTCTTGTTGCATCTGCGTTTGGAGCTTATC-TTCATGTGCT 228 ||||||||||||| || ||||||| |||| |||||| |||||||||| | |||| || | Sbjct 130 TATCTCACGTTATTCTTTGCTCTTCTTGCGTCTGCGATTGGAGCTTA-CATTCACATGGT 188 Query 229 CTGGAATATTGGCGGTATTCTTACAACGATTGGATGC-GTTGGAACT-ATGATTTGGCTC 286 ||||||||| || || | | | | || |||||| | | ||||| | ||||||||| Sbjct 189 CTGGAATATCGGTGGAAATGTCAGTACTCTTGGATTCAG-TGGAA-TCATGATTTGG--- 243 Query 287 CTTTC-TTGTC-CTCCTTATGAACAACAAAAGA-GACT-TTCTCTTCTGTTTGTGTCTGC 342 || | || || ||| |||||||| | || | | || | | ||||||||| | | ||| Sbjct 244 -TTGCGTT-TCACTCTTTATGAAC--C-TAACATG-CTCTAC-CTTCTGTTTCTATTTGC 296 Query 343 TGTTCTTGAAGGTGCTTCTGTTGGGCCCTTGATCAAAG-T-GGCAATTGATGTTGACCCA 400 ||||| |||||||||| ||||| ||| ||||| | | | | | |||||| ||||| || Sbjct 297 CCTTCTTAAAGGTGCTTCAGTTGGTCCCATGATC-ATGCTAGTC-ATTGATTTTGACTCA 354 Query 401 AGCATCCTTATTACTGCATTTGTTGGAACTGCAATAGCGTTTGTCTGTTTCTCGGCTGCA 460 ||| |||| | ||||||||||| ||||| ||| |||| ||||| |||||||| |||||| Sbjct 355 AGCGTCCTGGTCACTGCATTTGTGGGAACAGCAGTAGCATTTGTGTGTTTCTCCGCTGCA 414 Query 461 GCAATGTTAGCAA-GACGCAGGGAGTATCTCTACCTTGGAGGAC-T-ACTTTCATCTGGC 517 |||||||| |||| | || || ||||| || |||| ||| | | | |||| | | | | Sbjct 415 GCAATGTTGGCAACG-CGTAGAGAGTACCTTTACCACGGA-G-CTTCACTTGCTTGTTG- 470 Query 518 T-TGTCCATGCTAAT-GTGGCTTCAGTTTGCCTCTTCGATCTTTGGTGGCTCTGCATCTA 575 | ||||||| || | |||| | || |||||||||| ||||| || |||||| || || Sbjct 471 TATGTCCATCCT-TTGGTGGGTACAAATTGCCTCTTCCATCTTCGGAGGCTCTACAACTG 529 Query 576 TCTTTAAGTTTGAGTTGTACTTTGGACTCTTGATCTTTGTGGGATACATGGTGGTGGATA 635 || | ||||||||| | |||||||||||||||||||||||||||||||| |||||||| | Sbjct 530 TCGTCAAGTTTGAGCTATACTTTGGACTCTTGATCTTTGTGGGATACATAGTGGTGGACA 589 Query 636 CACAGGA-GATTATAGAGAAGGCACACCTCGGCGACATGGACTACGTGAAACATTCATTG 694 ||||| | ||| | ||||| ||||||| ||| || |||||||| ||| ||||||| || Sbjct 590 CACAG-ATGATAACCGAGAAAGCACACCACGGTGATATGGACTATGTGCAACATTCTTTT 648 Query 695 ACCCTTTTCACCGACTTTG 713 ||| ||||||| ||||||| Sbjct 649 ACCTTTTTCACTGACTTTG 667 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48174546973 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5