BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494344 Length=1817 Score E Sequences producing significant alignments: (Bits) Value AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein s... 2287 0.0 > AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein synthase I | chr5:18774086-18776742 REVERSE LENGTH=1936 Length=1936 Score = 2287 bits (1238), Expect = 0.0 Identities = 1338/1385 (97%), Gaps = 12/1385 (1%) Strand=Plus/Plus Query 1 TTTCGCAAAACACACATCACACACCATTTTCACAACATCGTACTTATCGCCTT-C-CTCT 58 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 21 TTTCGCAAAACACACATCACACACCATTTTCACAACATCGTACTTATCGCCTTCCTCTCT 80 Query 59 CTCTCAAT--CTCAATCTCAATTTCTGGATCCACCATGCAAGCTCTTCAGTCTTCATCTC 116 |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 81 CTCTCAATACCTC--TCTCAATTTCTGGATCCACCATGCAAGCTCTTCAATCTTCATCTC 138 Query 117 TCCGTGCTTCTCCACCAAACCCACTTCGCTTACCATCAAATCGTCAATCACATCAGATAA 176 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 139 TCCGTGCTTCTCCTCCAAACCCACTTCGCTTACCATCAAATCGTCAATCACATCAGCTAA 198 Query 177 TCACCACCAATGCGAGACCTTTGAGAAGAC-AC--CGCTCCTTCATCTCCGCATCAGCAT 233 | |||||||||||||||||| |||||| || || |||||||||||||||||||||| Sbjct 199 T---TACCAATGCGAGACCTTTGCGAAGACAACAACGTTCCTTCATCTCCGCATCAGCAT 255 Query 234 CCACTGTTTCCGCTCCTAAACGCGAAACAGATCCGAAGAAACGAGTTGTCATTACTGGTA 293 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 CCACTGTCTCCGCTCCTAAACGCGAAACAGATCCGAAGAAACGAGTTGTCATTACTGGTA 315 Query 294 TGGGTCTCGTCTCTGTGTTTGGTAACGATGTTGATGCTTACTACGACAAACTCTTGTCTG 353 |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 316 TGGGTCTCGTCTCTGTGTTTGGTAACGATGTTGATGCTTACTACGAGAAATTGTTGTCTG 375 Query 354 GTGAGAGTGGAATCAGTTTGATTGATCGTTTCGATGCTTCCAAGTTCCCTACTCGATTCG 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 376 GTGAGAGTGGAATCAGTTTGATTGATCGTTTCGATGCTTCCAAGTTCCCTACTCGATTCG 435 Query 414 GTGGTCAGATCCGTGGCTTTAGCTCTGAAGGTTATATTGATGGCAAAAATGAGCGTAGGC 473 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 436 GTGGTCAGATCCGTGGGTTTAGCTCTGAAGGTTATATTGATGGCAAGAATGAGCGTAGGC 495 Query 474 TTGATGATTGTTTGAAGTATTGCATTGTTGCTGGTAAAAAAGCTCTTGAAAGTGCCAATC 533 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 TTGATGATTGTTTGAAATATTGCATTGTTGCTGGTAAAAAAGCTCTTGAAAGTGCCAATC 555 Query 534 TTGGTGGTGATAAACTTAACACGATTGATAAGAGGAAAGCTGGAGTACTAGTTGGGACTG 593 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 556 TTGGTGGTGATAAGCTTAACACGATTGATAAGAGGAAAGCTGGAGTACTAGTTGGGACTG 615 Query 594 GAATGGGAGGTTTAACTGTGTTTTCAGAAGGAGTTCAGAATTTGATTGAGAAGGGTCATA 653 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 616 GAATGGGAGGTTTAACTGTGTTTTCAGAAGGTGTTCAGAATTTGATTGAGAAGGGTCATA 675 Query 654 GGAGGATTAGTCCATTTTTTATACCTTATGCTATAACAAACATGGGTTCTGCTTTGTTGG 713 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 676 GGAGGATTAGTCCATTTTTTATACCTTATGCTATAACAAATATGGGTTCTGCTTTGTTGG 735 Query 714 CGATTGATCTTGGTCTTATGGGTCCTAACTACTCGATTTCTACTGCTTGTGCTACTTCGA 773 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 736 CGATTGATCTTGGTCTTATGGGTCCTAACTATTCGATTTCAACTGCTTGTGCTACTTCGA 795 Query 774 ATTACTGTTTTTACGCTGCTGCGAACCACATTCGTCGTGGTGAAGCTGATATGATGATTG 833 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 796 ATTACTGCTTTTACGCTGCTGCGAATCACATTCGTCGTGGTGAAGCTGATATGATGATTG 855 Query 834 CTGGTGGGACTGAGGCTGCTATTATTCCTATTGGGTTGGGAGGTTTTGTTGCTTGTAGGG 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 856 CTGGTGGGACTGAGGCTGCTATTATTCCTATTGGGTTGGGAGGTTTTGTTGCTTGTAGGG 915 Query 894 CATTGTCTCAGAGGAATGATGACCCTCAAACTGCTTCGAGGCCGTGGGATAAAGCAAGAG 953 ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 916 CATTGTCCCAGAGAAATGATGACCCTCAAACTGCTTCCAGGCCGTGGGATAAAGCAAGAG 975 Query 954 ATGGCTTTGTTATGGGCGAAGGAGCTGGTGTTCTGGTGATGGAAAGTTTGGAACATGCGA 1013 |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct 976 ATGGGTTTGTTATGGGTGAAGGAGCTGGTGTTCTGGTGATGGAAAGCTTGGAACATGCAA 1035 Query 1014 TGAAACGTGGTGCTCCAATTGTAGCAGAATATCTTGGAGGTGCTGTTAATTGTGATGCTC 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1036 TGAAACGTGGTGCTCCAATTGTAGCAGAATATCTTGGAGGTGCTGTTAATTGTGATGCTC 1095 Query 1074 ACCATATGACTGATCCAAGAGCTGATGGGCTTGGTGTCTCTTCATGCATTGAGAGATGCC 1133 |||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||| Sbjct 1096 ACCATATGACTGATCCAAGAGCTGATGGTCTTGGGGTTTCTTCATGCATTGAAAGATGCC 1155 Query 1134 TTGAAGATGCTGGTGTATCACCTGAGGAGGTAAATTACATCAATGCACATGCAACATCCA 1193 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1156 TGGAAGATGCTGGTGTATCACCTGAGGAGGTAAATTACATCAATGCACATGCAACTTCCA 1215 Query 1194 CTCTTGCTGGTGATCTTGCTGAGATTAATGCCATTAAAAAGGTATTCAAGAGCACTTCAG 1253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1216 CTCTTGCTGGTGATCTTGCTGAGATTAATGCCATTAAAAAGGTATTCAAGAGCACTTCAG 1275 Query 1254 GGATCAAAATCAATGCCACCAAGTCTATGATAGGTCACTGCCTCGGTGCAGCTGGAGGTC 1313 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1276 GGATCAAAATCAACGCCACCAAGTCTATGATAGGTCACTGCCTCGGTGCAGCTGGAGGTC 1335 Query 1314 TAGAAGCCATCGCCACCGTGAAGGCTATTAACACTGGATGGCTGCATCCTTCCATCAACC 1373 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1336 TAGAAGCCATCGCCACCGTGAAGGCTATCAACACTGGATGGCTGCATCCTTCCATCAACC 1395 Query 1374 AATTT 1378 ||||| Sbjct 1396 AATTT 1400 Score = 645 bits (349), Expect = 0.0 Identities = 414/442 (94%), Gaps = 18/442 (4%) Strand=Plus/Plus Query 1379 AACCCAGAACAAGCTGTGGACTTTGACACGGTCCCAAACGAGAAGAAGCAGCACGAAGTT 1438 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1449 AACCCAGAACAAGCTGTGGACTTTGACACGGTCCCAAACGAGAAGAAGCAACACGAGGTT 1508 Query 1439 GATGTTGCCATATCAAACTCGTTCGGGTTCGGTGGACACAACTCAGTCGTCGCCTTCTCT 1498 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1509 GATGTTGCCATATCAAACTCGTTCGGGTTCGGTGGACACAACTCGGTAGTCGCCTTCTCT 1568 Query 1499 GCCTTCAAACCCTGATTTCTTCATACCTTTTAGATTCTCTGCTCC-ATCCGTTAC-ATCA 1556 |||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||| Sbjct 1569 GCCTTCAAACCCTGATTTCTTCATACCTTTTAGATTCTCTGC-CCTATCGGTTACTATCA 1627 Query 1557 TC--C-ATCACCACCACTTGCAGCTTCTTGGTTTCACAAGTTTAAGCTCTTCCTCTGGCC 1613 || | ||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 1628 TCATCCATCACCACCACTTGCAGCTTCTTGGTT-CACAAGTTGGAGCTCTTCCTCTGGCC 1686 Query 1614 TTTTGCGGTTCTTATTTTTCCATTCCCCGTTTTGTTACTGTTGCTGAGATTTCAGATTTT 1673 ||||||||||||| | | ||||||||||| |||| ||||||||||||||||||||| Sbjct 1687 TTTTGCGGTTCTT-T----C-ATTCCCCGTTTC-TTACGGTTGCTGAGATTTCAGATTTT 1739 Query 1674 GTTTGTTCTCTCTCTTGTCTGCGGAATGTT-TGTATCTTAGTTCGTTCCATATTTGCGTA 1732 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1740 GTTTGTTCTCTCTCTTGTCTGCGGAATGTTGTGTATCTTAGTTCGTTCCATATTTGCGTA 1799 Query 1733 ATTTATAAAA-CAGAAAACTGAGAGAATCTTGTAGTAACGGTGTTAGTGTCAGAATAATC 1791 |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 1800 ATTTATAAAAACAGAAA-CTGAGAGAATCTTGTAGTAACGGTGTTATTGTCAGAATAATC 1858 Query 1792 CAAATTAGGGGATTCTCATCTT 1813 ||| |||||||||||||||||| Sbjct 1859 CAA-TTAGGGGATTCTCATCTT 1879 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89909176095 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5