BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494458 Length=1865 Score E Sequences producing significant alignments: (Bits) Value AT5G45275.1 | Symbols: | Major facilitator superfamily protein... 2972 0.0 > AT5G45275.1 | Symbols: | Major facilitator superfamily protein | chr5:18334405-18337380 REVERSE LENGTH=1924 Length=1924 Score = 2972 bits (1609), Expect = 0.0 Identities = 1785/1870 (95%), Gaps = 12/1870 (1%) Strand=Plus/Plus Query 1 ttttttttCTCGATTCGTCGTAACCAGTGAAGAAGCTCGAATCAAACAAAagagagagag 60 |||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||| Sbjct 3 TTTTTTTTCTCGATTCGTCGAAACAAGTGAAGAAGCTCGAATCAAAC----GAGTGAGAG 58 Query 61 agaACa-aaaaaa-aaaaTCAAAATCTCCGGTGATTCAGGAACCGTACGTCGGAGATTGT 118 |||||| |||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 59 AGAACACAAAAAACAAAATCAAAATCTCCGGTGAATCAGGAACTGTACGTCGGAGATTGT 118 Query 119 -TAAACACGGTGAG-GGAAAAAAGATGGCGGGACAATCACGAAAATGGATGATTCTCGTA 176 |||||||||| | | |||||||||||||||||||||||||||||||||||||| ||| Sbjct 119 GAAAACACGGTG-GTCG-AAAAAGATGGCGGGACAATCACGAAAATGGATGATTCTGGTA 176 Query 177 GCGACGATCTGGATTCAAGCTTTCACTGGTACGAATTTCGATTTCTCGACGTACTCGTCG 236 |||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct 177 GCGACGATTTGGATTCAAGCATTCACCGGTACGAATTTCGATTTCTCGACGTATTCGTCG 236 Query 237 AATTTGAAATCGGTTCTAGGGATTTCGCAAGTACAATTGAATTATCTCGCCGTTGCTTCG 296 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 237 AATTTGAAATCGGTTCTAGGGATTTCGCAAGTACAATTGAATTATCTCGCCGTCGCTTCG 296 Query 297 GATCTTGGGAAAGTTTTCGGTTGGTCATCGGGACTTGCACTCTTGTATTTCCCTCTTTGG 356 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 GATCTTGGTAAAGTTTTCGGTTGGTCATCGGGACTTGCACTCTTGTATTTCCCTCTTTGG 356 Query 357 ACGGTTCTTTTCGCGGCGGCGATTATGGGTTTCGTTGGTTATGGTGTTCAATGGCTCGTC 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 ACGGTTCTTTTCGCGGCGGCGATTATGGGTTTCGTTGGTTATGGTGTTCAATGGCTCGTC 416 Query 417 ATCACTAACGTTATCTCTTTGCCTTATATTCTGGTATTTCTATGTTGTTTACTAGCTGGG 476 ||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct 417 ATCACTAACGTCATCTCTTTGCCTTATATTCTGGTGTTTCTGTGTTGTTTGCTAGCTGGG 476 Query 477 CTAAGTATCTGTTGGTTTAACACAGTCTGCTTTGTGCTCTGTATCAGAAACTTTCCAGCA 536 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct 477 CTAAGTATCTGTTGGTTCAACACAGTCTGCTTTGTGCTCTGCATCAGAAACTTCCCTGCA 536 Query 537 AACAGATCACTTGCACTTTCTCTCACAGTGAGCTTTAATGGCGTAAGTGCTGCTTTGTAC 596 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 537 AACAGATCACTTGCACTTTCTCTCACAGTGAGCTTTAATGGTGTAAGTGCTGCTTTATAC 596 Query 597 ACTCTTGCTTATAACGCAATCAATCCTGTTTCTACAGAACTATACCTACTCTTAAACGCT 656 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 597 ACTCTTGCTTACAACGCAATCAATCCTGTTTCTACAGAGCTATACCTACTCTTAAACGCT 656 Query 657 CTTGTACCTCTTTTTGTTTCATTCGCTGCTCTCATCCCTATTCTTCGCCAACCGCCTCTT 716 ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| Sbjct 657 CTTGTACCTCTTTTTGTCTCATTTGCTGCACTCATCCCTATTCTTCGCCAACCGCCTCTT 716 Query 717 GAACCTCTTCCACCAGATGGAGTTCGAAGAGACTCTCTCATGTTTCTCTTGCTTAACATA 776 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 717 GAACCTCTTCCACCAGATGGAGTTCGAAGAGACTCTCTCATGTTTCTATTGCTTAACATA 776 Query 777 TTAGCGGTCTTGAATGGTGTTTATCTGCTTCTCTTTCGTTCAAAGACTTCTGATGTAACT 836 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 TTAGCGGTCTTGAACGGTGTTTATCTGCTTCTCTTTCGTTCAAAGACTTCTGATGTAACT 836 Query 837 TCAGCTCGTCTTCTCTTTGGTGGATCATTACTTCTCTTGATTCTTCCTCTATGCCTTCCT 896 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 837 TCAGCTCGTCTTCTCTTTGGTGGATCAATACTTCTCTTGATTCTTCCTCTATGCCTCCCT 896 Query 897 GGTCTAGTCTATGCTCGTAATTGGTATCTACACAATATCCACTCCAGTTTCCGTCTAGAA 956 ||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||| Sbjct 897 GGTCTAGTCTACGCTCGCAATTGGTATCTACACAACATCCACTCCAGCTTCCGTTTAGAA 956 Query 957 GGTTCTGGTTTTATTCTTGTTGATGTTGATGAGCTTGAGATGCATAAAGGAATGGTGACA 1016 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957 GGTTCTGGTTTCATTCTTGTTGATGTTGATGAGCTTGAGATGCATAAAGGAATGGTGACA 1016 Query 1017 CGTGAAGCCAGCCTTGAAGGCTACCAGTTGCTAAACGATGATGTAGTGCGAGCTGTCAAT 1076 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1017 CGTGAAGCCAGCCTTGAAGGCTACCAGTTGCTTAACGATGATGTAGTGCGAGCTGTCAAT 1076 Query 1077 ACTCCTGATCAGAAGAGTTTCATTGAAGATGACGACGGATGTTGTTGCACTAAGCTTATT 1136 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct 1077 ACTCCTGATCAGAAGAGTTTCATTGAAGATGACGACGGATGTTGTTGCACAAAGGTCATT 1136 Query 1137 ACAAGAAATCAGCTTGGGATGCTTGG-AGAAGAACATCCTTTATCTTTACTCTTATGCAG 1195 ||||||||||||||||| ||| |||| ||| ||||||||| ||||||| ||||||||||| Sbjct 1137 ACAAGAAATCAGCTTGGAATG-TTGGGAGAGGAACATCCTCTATCTTTCCTCTTATGCAG 1195 Query 1196 ATCAGATTTCTGGCTTTACTATATAGCCTACTTTTGCGGCGGCACGATTGGGCTGGTTTA 1255 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 1196 ATCAGATTTCTGGCTTTACTATATAGCCTATTTTTGCGGCGGCACGATTGGACTGGTTTA 1255 Query 1256 TAGCAACAACCTGGGACAGATTGCACAATCTTTAGGACAAAGCTCAGAGACAACAACTCT 1315 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1256 CAGCAACAACCTGGGACAGATTGCACAATCTTTAGGACAAAGCTCTGAGACAACAACTCT 1315 Query 1316 TGTAACGCTTTATTCGTCTTTCTCATTCTTTGGTCGATTACTTTCAGCAACACCAGACTA 1375 ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 1316 TGTCACGCTTTATTCGTCTTTCTCATTCTTCGGTAGATTACTTTCAGCAACACCAGACTA 1375 Query 1376 TATCAGAGCGAAGGTTTATTTTGCTAGAACAGGGTGGCTAGCCGTTGCTCTTTTACCAAC 1435 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1376 TATCAGAGCGAAGGTTTATTTTGCTAGAACTGGGTGGCTAGCCGTTGCTCTTTTACCAAC 1435 Query 1436 CACAATTGCTCTTTTCTTGTTGGCATCATCAGGAAGCTTGGCAGCGTTACAAGCAGGAAC 1495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 CACAATTGCTCTTTTCTTGTTGGCATCATCAGGAAGCTTGGCAGCGTTACAAGCAGGAAC 1495 Query 1496 AGCTCTAATCGGTCTAAGCTCGGGTTTCATATTTGCAGCAGCGGTTTCCATAACATCTGA 1555 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1496 TGCTCTAATCGGTCTAAGTTCGGGTTTCATATTTGCAGCAGCGGTTTCCATAACATCTGA 1555 Query 1556 GCTTTTTGGACCCAACAGCGTCGGGGTTAACCACAACATCCTCATCACAAACATACCGAT 1615 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1556 GCTTTTTGGACCCAATAGCGTTGGGGTTAACCACAACATCCTCATCACAAACATACCGAT 1615 Query 1616 AGGATCATTGGTCTACGGTTTCTTAGCTGCTTTGGTCTATGAATCCCACAGTGTGGCTAG 1675 |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| | Sbjct 1616 AGGATCGTTGGTCTACGGTTTCTTAGCTGCTTTGGTCTATGAATCCCATAGCGTGGCTGG 1675 Query 1676 GTCAAAGACCGAGTCAGTTATATGTATGGGACGAGACTGTTATCTCCTAACGTTTGTGTG 1735 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct 1676 GTCAAAGACCGAGTCGGTTATATGTATGGGAAGAGACTGTTATCTCCAAACGTTTATGTG 1735 Query 1736 GTGGGGATGCTTGTCGGTGATTGGACTAGCTTCAAGTGTTGTTTTGTTTCTGAGAACTAG 1795 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1736 GTGGGGATGCTTGTCGGTGATTGGACTAGCTTCAAGTGTTGTCTTGTTTCTGAGAACCAG 1795 Query 1796 ACGAGCCTATCAACGTTTTGAACAAGATCGTATAACTTCGAGCATGCTCTATTCTTAGAA 1855 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | Sbjct 1796 ACGAGCCTATCAACGTTTTGAACAAGATCGGATAACTTCCAGCATGCTCTATTCTTAGTA 1855 Query 1856 TTTTCTCCAA 1865 ||| |||||| Sbjct 1856 TTTCCTCCAA 1865 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 92318802255 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5