BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494575 Length=1376 Score E Sequences producing significant alignments: (Bits) Value AT5G44190.1 | Symbols: GLK2, ATGLK2, GPRI2 | GOLDEN2-like 2 | c... 2069 0.0 > AT5G44190.1 | Symbols: GLK2, ATGLK2, GPRI2 | GOLDEN2-like 2 | chr5:17798369-17800824 FORWARD LENGTH=1404 Length=1404 Score = 2069 bits (1120), Expect = 0.0 Identities = 1304/1390 (94%), Gaps = 24/1390 (2%) Strand=Plus/Plus Query 1 GTATCATTCTTGTTTTCTCTAAATTTTTC---AAATCTTTAGAATTTTCAAGTTTTT--- 54 ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| Sbjct 1 GTATCATTCTTGTTTTCTCTAAATTTTTCAAAAAACCTTTAGAATTTTCATTTTTTTACG 60 Query 55 A-T-AAATGTTAACTGTTTCTCCGGCTCC---ACTCATCGGAAACAACTCGAAGGATACT 109 | | ||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 61 ATTCCGATGTTAACTGTTTCTCCGGCTCCAGTACTCATCGGAAACAACTCAAAGGATACT 120 Query 110 TACATGGCGGCAGATTTCGCAGATTTTACGACGGAAGGCTTGCCGGACTTTACGACGGTC 169 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 TACATGGCGGCAGATTTCGCAGATTTTACGACGGAAGACTTGCCGGACTTTACGACGGTC 180 Query 170 GGAGATTTCTCCGATGATCTTCTTGATGGAATCGATTACTACGACGATCTTTTCATTGGT 229 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGGGATTTTTCCGATGATCTTCTTGATGGAATCGATTACTACGACGATCTTTTCATTGGT 240 Query 230 TTCGATGGAGACGATGTTTTGCCGGATTTGGAGATTGATACGGAGATTCTTGGGGAATAT 289 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 241 TTCGATGGAGACGATGTTTTGCCGGATTTGGAGATAGATTCGGAGATTCTTGGGGAATAT 300 Query 290 TCCGGTAGCGGAAGAGATGAGGAACAAGAAATGGAGGGTAACACTTCGACGGCGTCGGAG 349 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 301 TCCGGTAGCGGAAGAGATGAGGAACAAGAAATGGAGGGTAACACTTCGACGGCATCGGAG 360 Query 350 ACGTCGGAGAGAGACGGTGGTCATGGGTGTAAGCAAGAGGGTGGCGGTGGTGGTGACGGT 409 || ||||||||||||| ||| || |||||||||||||||||| ||||||||||||||| Sbjct 361 ACATCGGAGAGAGACGTTGG---TGTGTGTAAGCAAGAGGGTGGTGGTGGTGGTGACGGT 417 Query 410 GGTGTTAGGGACAAAACGGTGCGTAGAGGCAAACGTAAAGGGAAGAAAAATAAAGATTGT 469 ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 418 GGTTTTAGGGACAAAACGGTGCGTCGAGGCAAACGTAAAGGGAAGAAAAGTAAAGATTGT 477 Query 470 TTATCCGATGATAACGATATTAAGAAAAAACCCAAGGTGGATTGGACGCCGGAGTTACAC 529 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 478 TTATCCGATGAGAACGATATTAAGAAAAAACCTAAGGTGGATTGGACGCCGGAGTTACAC 537 Query 530 CGGAAATTTGTACAAGCGGTGGAGCAATTAGGGGTAGACAAGGCGGTGCCGTCACGGATT 589 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 538 CGGAAATTTGTACAAGCGGTGGAGCAATTAGGGGTAGACAAGGCGGTGCCGTCTCGAATC 597 Query 590 TTGGAAATTATGAACGTTAAATCTCTCACTCGTCACAACGTTGCTAGCCATCTTCAGAAA 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TTGGAAATTATGAACGTTAAATCTCTCACTCGTCACAACGTTGCTAGCCATCTTCAGAAA 657 Query 650 TATAGATCACATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAATCTC 709 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 TATAGGTCACATCGGAAACATCTACTAGCGCGTGAAGCAGAAGCTGCCAGCTGGAATCTC 717 Query 710 CGGCGACATGCGACGGTGGCAGTGGCCGGAGTAGGAGGAGGTGGGAAGAAGCCATGGACG 769 ||| ||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct 718 CGGAGACATGCCACGGTGGCAGTGCCCGGAGTAGGAGGAGGAGGGAAGAAGCCGTGGACA 777 Query 770 GCTCCTGCCTTAGGCTATCCACCACACGTGGCACCAATGCATCATGGCCACTTCAGGCCT 829 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 778 GCTCCTGCCTTAGGCTATCCTCCACACGTGGCACCAATGCATCATGGTCACTTCAGGCCT 837 Query 830 TTGCACGTGTGGGGTCATCCTACGTGGCCTAAACACAAGCCTAATACTCCTGCGTCTGCT 889 |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 838 TTGCACGTATGGGGTCATCCTACGTGGCCAAAACACAAGCCTAATACTCCGGCGTCTGCT 897 Query 890 CATCGGACGTATCCGATTCC-GTTAGTTGCGGCGGCTCCGGCATCTTGGCCAGGTCATCC 948 |||||||||||||| || || | | |||||||||||||||||||||||||||||||||| Sbjct 898 CATCGGACGTATCCAATGCCGGCCA-TTGCGGCGGCTCCGGCATCTTGGCCAGGTCATCC 956 Query 949 GCCGTACTGGCACCAACAACCACTATATCCACAGGGATATGGTATCGCATCATCGAATCA 1008 ||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||| Sbjct 957 ACCGTACTGGCATCAGCAACCACTCTATCCACAGGGATATGGTATGGCATCATCGAATCA 1016 Query 1009 TTCAAGCATCGGTGTTCCCACAAGACAATTAGGACCCACTAATCCTCCCATCGACATTCA 1068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 TTCAAGCATCGGTGTTCCCACAAGACAATTAGGACCCACTAATCCTCCCATCGACATTCA 1076 Query 1069 TCCCTCGAATGAGAGCATAGACGCGGCTATTGGAGAAGTGATAACAAAGCCGTGGCTGCC 1128 ||||||||||||||||||||| || |||||||| || || ||| |||||||||||||||| Sbjct 1077 TCCCTCGAATGAGAGCATAGATGCAGCTATTGGGGACGTTATATCAAAGCCGTGGCTGCC 1136 Query 1129 GCTTCCTTTGGGACTGAAACCGCCGTCAGTTGATGGTGTCATGACGGAGTTACAACATCA 1188 ||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| ||| Sbjct 1137 GCTTCCTTTGGGACTGAAACCGCCGTCGGTTGACGGTGTTATGACGGAGTTACAACGTCA 1196 Query 1189 AGGAGTTTCTAATGTTCCTCCTCTTCCTTGAGaaaaaaaaTCTCCAAAATTTGCCGAAAT 1248 ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||| Sbjct 1197 AGGAGTTTCTAATGTTCCTCCTCTTCCTTGAGAAAGA---TCTCCAAAATTTGTCGAAAT 1253 Query 1249 CTCGAT-TTTTAACTTCAttttttttGGTATCTTCTAAGTATTTTTGCA-GGGAAAAATA 1306 ||| | |||||||||||||||||| ||||||||||| ||||||||||| |||||| | Sbjct 1254 CTCAAACTTTTAACTTCATTTTTTT-GGTATCTTCTATGTATTTTTGCAAGGGAAAGA-- 1310 Query 1307 CTATAAATCCTTGTTGCTTGATCATATGTATTTCTCTATATGAGTGCATGTATCGAAGTT 1366 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1311 CGATAAATCCTTGTTGCTTGATCATATGTATTTCTCTATATGAGTGCATGTATCGAAGTT 1370 Query 1367 AAGCAACTTT 1376 |||||||||| Sbjct 1371 AAGCAACTTT 1380 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67770735750 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5