BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg494593
Length=3349
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | cellulose synthase A... 5144 0.0
AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 | chr5:3073... 429 8e-119
> AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | cellulose synthase
A4 | chr5:17714645-17719723 FORWARD LENGTH=3377
Length=3377
Score = 5144 bits (2785), Expect = 0.0
Identities = 3159/3337 (95%), Gaps = 35/3337 (1%)
Strand=Plus/Plus
Query 25 AGAGCTCAGCT-TGCCTTGCCATGGAACCAAACACCATGGCCACCTTTGACCATGAGCAT 83
||||||||| | | ||| ||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct 49 AGAGCTCAG-TGTACCTCGCCATGGAACCAAACACCATGGCCAGCTTCGACGATGAGCAT 107
Query 84 CGTCA-T--TCATCCCCGGCTAAGATCTGTAGAGTTTGTGGCGATGAGGTCAAAGACGAT 140
||||| | |||| | |||||||||| || | ||| ||||||||||||||||||||||||
Sbjct 108 CGTCATTCCTCATTCTCGGCTAAGATTTGCAAAGTCTGTGGCGATGAGGTCAAAGACGAT 167
Query 141 GACAATGGCCAGACTTTTGTGGCGTGCCACGTGTGCGCTTACCCGGTTTGCAAACCTTGC 200
|||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 168 GACAATGGTCAGACTTTTGTGGCGTGTCACGTGTGCGTTTACCCGGTTTGCAAACCTTGC 227
Query 201 TATGAATACGAGCGTAGCAACGGTAACAAATGTTGCCCTCAATGCAATACTATTTACAAA 260
|||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 228 TATGAATATGAGCGTAGCAACGGTAACAAATGTTGCCCTCAATGCAACACTCTTTACAAA 287
Query 261 CGCCACAGAGGCTCTCCGAAAATCGCTGGAGATGAAGAAAACAATGGTCCTGATGATTCA 320
||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 288 CGCCACAAAGGCTCTCCAAAAATCGCCGGAGATGAAGAAAACAATGGTCCTGATGATTCA 347
Query 321 GATGATGAGTTGAATATCAAGA-ATCGCCAGGATGCTTCCTCCATTCACCAGAATTTTGC 379
|||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||
Sbjct 348 GATGATGAGTTGAATATCAA-ATATCGCCAGGATGGTTCCTCCATTCACCAGAATTTTGC 406
Query 380 CTATGGATCGGAAAATGGAGATTACAATAGTAAGCAGCAATGGCGTCCAAATGGGCGGGC 439
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||
Sbjct 407 CTATGGATCGGAAAATGGAGACTACAACAGTAAGCAGCAATGGCGTCCAAATGGTCGAGC 466
Query 440 CTTTTCTTCCACCGGAAGTGTGTTGGGGAAAGACTTTGAAGCTGAAAGAGATGGCTACAC 499
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 467 CTTTTCTTCCACCGGAAGTGTGTTGGGGAAAGACTTTGAAGCTGAGAGAGATGGCTACAC 526
Query 500 AGATGCAGAGTGGAAAGAACGAGTAGATAAATGGAAAGCGAGGCAAGAGAAGAGAGGTTT 559
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 527 AGATGCGGAGTGGAAAGAACGTGTAGATAAATGGAAAGCGAGGCAAGAGAAGAGAGGTTT 586
Query 560 AGTGACTAAAGGAGAACAAACAAACGAAGACAAAGAAGATGATGAAGAAGAATACCTCGA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 587 AGTGACTAAAGGAGAACAAACAAACGAAGACAAAGAAGATGATGAAGAAGAATACCTAGA 646
Query 620 TGCTGAAGCAAGACAACCTCTCTGGAGAAAAGTCCCAATCTCATCGAGCAAAATCAGTCC 679
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 647 TGCTGAAGCAAGACAACCTCTCTGGAGAAAAGTCCCAATCTCTTCGAGCAAAATCAGTCC 706
Query 680 TTACCGCATTGTGATCGTTCTTCGTCTTGTGATCTTAGTTTTCTTCTTCCGTTTCCGTAT 739
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 707 TTACCGCATCGTGATCGTTCTTCGCCTTGTGATCTTAGTTTTCTTCTTCCGTTTCCGTAT 766
Query 740 CTTGACACCAGCCAAAGACGCATACCCTCTCTGGCTTATCTCAGTCATCTGTGAGATCTG 799
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 767 CTTGACACCAGCCAAAGACGCATACCCTCTCTGGCTTATCTCAGTCATCTGCGAGATCTG 826
Query 800 GTTCGCACTTTCTTGGATCCTTGATCAGTTCCCGAAATGGTTTCCAATTAACCGAGAAAC 859
|||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 827 GTTCGCTCTCTCTTGGATCCTTGATCAGTTCCCGAAATGGTTTCCGATTAACCGAGAAAC 886
Query 860 CTATCTTGACCGTCTCTCTATGAGATTTGAACGGGATGGCGAAAAGAACAAGCTTGCACC 919
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 887 CTACCTTGACCGTCTCTCTATGAGATTTGAACGGGATGGGGAAAAGAACAAGCTTGCACC 946
Query 920 GGTTGATGTGTTTGTCAGTACGGTGGATCCGCTCAAGGAGCCTCCGATAATCACAGCCAA 979
||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct 947 GGTTGATGTGTTTGTCAGTACAGTGGATCCGCTCAAGGAACCTCCCATAATCACAGCCAA 1006
Query 980 CACTATTCTTTCGATCTTATCCGTTGATTACCCAGTAAATAAGGTTAGCTGCTATGTGTC 1039
||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||
Sbjct 1007 CACAATTCTTTCGATCTTAGCCGTTGATTACCCAGTGAATAAGGTGAGCTGCTATGTGTC 1066
Query 1040 TGATGACGGTGCATCAATGCTACTGTTCGATACATTGTCTGAAACTTCCGAGTTTGCAAG 1099
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1067 TGATGACGGTGCATCAATGCTCCTGTTCGATACATTGTCCGAAACTTCCGAGTTTGCAAG 1126
Query 1100 GAGATGGGTTCCGTTTTGCAAGAAGTACAATGTTGAGCCAAGAGCTCCAGAGTTTTACTT 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 GAGATGGGTTCCGTTTTGCAAGAAGTACAATGTTGAGCCAAGAGCTCCAGAGTTTTACTT 1186
Query 1160 CTCTGAGAAGATTGATTACTTAAAGGATAAAGTCCAAACTACATTCGTCAAAGATCGCAG 1219
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 CTCAGAGAAGATTGATTACCTAAAGGATAAAGTCCAAACTACATTCGTCAAAGATCGCAG 1246
Query 1220 AGCAATGAAGAGAGAATATGAAGAATTCAAAGTGAGGATCAATGCTTTAGTGGCTAAAGC 1279
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1247 AGCAATGAAGAGAGAATATGAAGAATTCAAAGTGAGGATCAATGCTTTAGTAGCTAAAGC 1306
Query 1280 TCAGAAGAAGCCTGAAGAAGGTTGGGTGATGCAAGATGGTACACCATGGCCTGGGAACAA 1339
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1307 TCAAAAGAAGCCTGAAGAAGGTTGGGTTATGCAAGATGGTACACCATGGCCTGGGAATAA 1366
Query 1340 CACTCGTGATCATCCCGGGATGATTCAGGTGTATCTCGGTAAAGAAGGAGCATTCGACAT 1399
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1367 CACTCGTGATCATCCCGGGATGATTCAGGTGTATCTCGGCAAAGAAGGAGCATTCGACAT 1426
Query 1400 TGATGGTAACGAATTGCCACGCCTCGTGTATGTATCAAGAGAGAAGCGTCCTGGTTACGC 1459
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1427 TGATGGTAACGAATTGCCACGTCTCGTGTATGTATCAAGAGAGAAGCGTCCTGGTTACGC 1486
Query 1460 ACACCACAAGAAAGCTGGAGCTATGAATGCAATGGTTCGAGTCTCAGCAGTGCTCACAAA 1519
||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 1487 ACACCACAAGAAAGCTGGAGCCATGAATGCAATGGTTCGAGTCTCTGCAGTACTCACTAA 1546
Query 1520 TGCTCCATTCATGCTTAATCTTGACTGTGATCATTACATCAACAACAGTAAAGCCATAAG 1579
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1547 TGCTCCATTCATGCTTAATCTCGACTGTGACCATTACATCAACAACAGTAAAGCCATAAG 1606
Query 1580 AGAATCAATGTGCTTTCTAATGGATCCACAGCTTGGTAAAAAGCTTTGTTATGTTCAATT 1639
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1607 AGAATCAATGTGCTTTCTAATGGATCCACAGCTTGGTAAAAAGCTCTGTTATGTCCAATT 1666
Query 1640 CCCTCAAAGATTCGACGGAATCGATCATAACGATCGATACGCTAACAGAAACATCGTCTT 1699
||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1667 CCCACAAAGATTCGACGGAATCGATCTTAACGATCGATACGCCAACAGAAACATCGTCTT 1726
Query 1700 CTTCGATGTAAACATGAGAGGCTTAGATGGAATTCAAGGACCAGTCTACGTAGGAACAGG 1759
||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1727 CTTCGATATAAACATGAGAGGCTTAGATGGAATCCAAGGACCAGTCTATGTAGGAACAGG 1786
Query 1760 ATGTGTATTCAATAGACCAGCATTATACGGATACGAACCACCGGTATCGGaaaaaagaaa 1819
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1787 ATGTGTATTCAATAGACCAGCATTATACGGATACGAACCTCCGGTATCGGAAAAACGAAA 1846
Query 1820 -aaaGATGACCTGTGATTGTTGGCCGTCGTGGATTTGCTGTTGTTGCGGCGGAGGTAACC 1878
||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1847 GAAA-ATGACATGTGATTGTTGGCCGTCGTGGATCTGCTGTTGTTGCGGCGGAGGTAACC 1905
Query 1879 GTAATCACAAATCGAAATCATCAGATTCGTCAAAGAAGAAATCAGGAATCAAAAGCTTGT 1938
||||||||||||| | ||||||||||||||||||||||||||||| |||||||
Sbjct 1906 GTAATCACAAATC-A--------GATTCGTCAAAGAAGAAATCAGGAATCAAGAGCTTGT 1956
Query 1939 TCTCGAAACTAAAGAAGAAGAAC-ATGAAGAAGAGTGAT-ACTACAACGACGATGAGTAG 1996
||||||||||||||||||||| | | ||||||||||||| | || || |||||||| ||
Sbjct 1957 TCTCGAAACTAAAGAAGAAGA-CTAAGAAGAAGAGTGATGA-TA-AA--ACGATGAGCAG 2011
Query 1997 CTATAGTAGAAAACGATCATCGACGGAGGCGATTTTTGATTTGGAAGATATTGAAGAAGG 2056
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2012 CTATAGTAGAAAACGATCATCGACGGAGGCGATTTTTGATTTGGAAGATATTGAGGAAGG 2071
Query 2057 ACTTGAAGGATATGATGAGCTTGAGAAATCGTCGTTAATGTCGCAGAAGAATTTTGAGAA 2116
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2072 GCTTGAAGGATATGATGAGCTTGAGAAATCTTCGTTAATGTCGCAGAAGAATTTTGAGAA 2131
Query 2117 GAGATTTGGGATGTCTCCTGTGTTTATTGCGTCGACGTTGATGGAGAACGGAGGTTTGCC 2176
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2132 GAGATTTGGAATGTCTCCTGTGTTTATTGCGTCGACGTTGATGGAGAACGGAGGATTGCC 2191
Query 2177 GGAGGCGACGAACACGAGCTCGTTGATCAAAGAAGCGATTCATGTTATTAGCTGTGGTTA 2236
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2192 GGAGGCGACGAACACGAGCTCGTTGATCAAAGAAGCTATTCATGTTATTAGCTGTGGTTA 2251
Query 2237 TGAAGAGAAGACTGAATGGGGCAAAGAGATTGGATGGATATATGGATCAGTCACGGAAGA 2296
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 2252 TGAAGAGAAGACTGAATGGGGCAAAGAGATTGGATGGATTTATGGATCAGTAACAGAAGA 2311
Query 2297 CATCCTTACGGGATTCAGGATGCATTGTAGAGGTTGGAAATCAGTTTATTGTATGCCTAA 2356
||||| || ||||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2312 TATCCTCACTGGATTTAGAATGCATTGTAGAGGTTGGAAATCAGTTTACTGTATGCCTAA 2371
Query 2357 AAGGCCAGCTTTCAAAGGATCAGCTCCGATCAATTTATCCGATCGGTTGCACCAAGTACT 2416
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2372 AAGACCAGCTTTCAAAGGATCAGCTCCGATCAATTTATCTGATCGGTTGCACCAAGTTCT 2431
Query 2417 TAGATGGGCACTCGGTTCCGTCGAAATCTTCTTTAGTCGTCATTGTCCTTTGTGGTATGC 2476
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2432 TAGATGGGCTCTTGGTTCCGTCGAAATCTTCTTTAGTCGTCATTGTCCTTTGTGGTATGC 2491
Query 2477 CTGGGGAGGCAAACTCAAGATTCTTGAACGTCTTGCTTACATCAACACAATTGTTTATCC 2536
||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2492 TTGGGGAGGCAAGCTTAAGATTCTAGAACGTCTTGCTTACATCAACACAATTGTTTATCC 2551
Query 2537 TTTCACTTCTATTCCTCTGCTTGCTTATTGTACTATTCCGGCTGTTTGTCTTCTCACCGG 2596
|||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct 2552 TTTCACTTCTATTCCTCTACTTGCCTATTGTACTATTCCGGCCGTTTGTCTTCTCACCGG 2611
Query 2597 CAAGTTCATCATTCCTACGATCAACAATTTCGCAAGCATATGGTTCCTAGCTCTGTTCCT 2656
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2612 CAAGTTCATCATTCCTACGATCAACAATTTCGCAAGCATATGGTTCTTAGCTCTGTTCCT 2671
Query 2657 ATCAATCATTGCGACGGCGATCTTAGAGCTCCGGTGGAGTGGCGTGAGCATAAACGACCT 2716
|||||||||||| ||||| |||||||| |||||||||||||| || ||||| || |||||
Sbjct 2672 ATCAATCATTGCAACGGCTATCTTAGAACTCCGGTGGAGTGGTGTAAGCATCAATGACCT 2731
Query 2717 TTGGCGTAACGAGCAATTCTGGGTAATTGGTGGTGTCTCAGCTCATCTCTTCGCAGTCTT 2776
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 2732 CTGGCGTAACGAGCAATTCTGGGTGATTGGCGGTGTCTCAGCTCATCTCTTCGCTGTCTT 2791
Query 2777 TCAAGGTCTTCTCAAAGTTCTCTTCGGTGTTGACACTAACTTCACCGTCACGTCAAAAGG 2836
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2792 TCAAGGTCTTCTTAAAGTTCTCTTTGGTGTTGACACTAACTTCACCGTCACGTCAAAAGG 2851
Query 2837 AGCCAGTGACGAAGCTGATGAGTTTGGAGATCTTTACCTCTTCAAATGGACAACTCTTCT 2896
||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2852 AGCCAGTGACGAAGCCGATGAGTTTGGAGATCTTTACCTCTTTAAATGGACAACCCTTCT 2911
Query 2897 CATCCCTCCGACTACGCTCATCATCCTTAACATGGTTGGTGTTGTCGCCGGAGTTTCTGA 2956
|||||||||||| || ||||| || || |||||||| |||||||| ||||||||||||||
Sbjct 2912 CATCCCTCCGACAACTCTCATTATTCTCAACATGGTCGGTGTTGTTGCCGGAGTTTCTGA 2971
Query 2957 CGCTATTAACAATGGATATGGTTCTTGGGGACCGCTCTTTGGGAAACTGTTTTTCGCGTT 3016
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2972 CGCTATTAACAATGGATATGGTTCTTGGGGACCGCTTTTTGGGAAACTGTTTTTCGCGTT 3031
Query 3017 TTGGGTCATTGTTCATCTTTACCCTTTCCTCAAAGGTTTGATGGGTCGACAAAACCGAAC 3076
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 3032 TTGGGTCATTGTTCATCTTTATCCTTTCCTCAAAGGTTTGATGGGTAGACAAAACCGAAC 3091
Query 3077 ACCGACAATCGTTGTTCTTTGGTCTATCCTTCTCGCCTCGATCTTCTCGTTGGTTTGGGT 3136
|||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 3092 ACCGACGATTGTTGTTCTTTGGTCTATCCTTCTCGCTTCGATCTTCTCTTTGGTTTGGGT 3151
Query 3137 TCGGATCGATCCGTTCTTGCCGAAACAGACTGGTCCGTTACTGAAGCAGTGTGGCGTCGA 3196
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3152 TCGGATTGATCCGTTCTTGCCGAAACAGACTGGTCCGTTACTGAAGCAATGTGGCGTCGA 3211
Query 3197 CTGTTAA-TGAGGAACCGCATTTGCGTTTGCGTTTTGGACCTCTATTTTGAGCCATTTTG 3255
||||||| ||||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct 3212 CTGTTAAATGAGGAACCGCATTT---T---CGTTTTGGACCGCTATTTTGAGCCATTTTG 3265
Query 3256 CTTGGCCTATTTTTCAGATTTGGGTGTTCTTTGTTGGATTATATGGATTTGTAAGGAG-A 3314
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3266 CTTGGCCTATTTTTCCGATTTGGGTGTTCTTTGTTGGATTATATGGATTTGTAAGGAGGA 3325
Query 3315 AAAAGATT-CATA-CTTTAAATCACTTGTGAAATAAA 3349
|||| | | || | |||| | ||||||||||||||||
Sbjct 3326 AAAAAAATACAAAACTTTGATTCACTTGTGAAATAAA 3362
> AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 | chr5:3073356-3078262
FORWARD LENGTH=3498
Length=3498
Score = 429 bits (232), Expect = 8e-119
Identities = 872/1171 (74%), Gaps = 84/1171 (7%)
Strand=Plus/Plus
Query 663 TCGAGCAAAATCAGTCCTTACCGCATTG-TGATCGTTCTTCGTCTTGTGA-TCTTAGTTT 720
||||||||||| | ||| ||| | | || | || ||||| |||||||||| || | | |
Sbjct 769 TCGAGCAAAATAAATCCGTACAGGA-TGCTAATTGTTCTGCGTCTTGTGATTC-TCGGTC 826
Query 721 TCTTCTTCCGTTTCCGTA-TCTTGACACCAGCCAAAGACGCATAC-CCTCTCTGGCTTAT 778
|||| |||| || ||||| |||| || || | ||| || || ||| ||| | ||||| ||
Sbjct 827 TCTTTTTCCATTACCGTATTCTTCAC-CCCGTCAATGATGCTTACGCCT-TGTGGCTAAT 884
Query 779 CTCAGTCATCTGTGAGATCTGGTTCGCACTTTCTTGGATCCTTGATCAGTTCCCGAAATG 838
|| || || || || || ||||| || |||| ||| | |||||||||||||| |||||
Sbjct 885 ATCTGTGATATGCGAAATATGGTTTGCGGTTTCATGGGTTCTTGATCAGTTCCCTAAATG 944
Query 839 GTTTCCAATTA-ACCGAGAAACCTATCTT-GACCGTCTCTCTA-TGAGATTTGAACGGGA 895
|| ||| | || | |||| || || ||| ||| | ||||| | |||| | ||| ||
Sbjct 945 GTATCCTA-TAGAAAGAGAGACATA-CTTGGACAGGCTCTC-ATTGAGGTACGAAAAAGA 1001
Query 896 TGGCGAAAAGAAC--AAGCTTGCACCG-GTTGATGTGTTTGTCAGTACGGTGGATCCGCT 952
|| |||| | | || || || | |||||||| ||||| ||||| ||||||||| |
Sbjct 1002 AGG-GAAACCATCTGAA-CTAGC-TGGTGTTGATGTTTTTGTGAGTACAGTGGATCCGAT 1058
Query 953 CAAGGAGCCTCCGATAATCACAGCCAACACTATTCTTTCGA-TCTTATCCGTTGATTACC 1011
|| ||||||||| | || ||||| |||||| |||| || | |||| | |||||||| |
Sbjct 1059 GAAAGAGCCTCCGCTTATTACAGCAAACACTGTTCTGTCTATTCTT-GCGGTTGATTATC 1117
Query 1012 CAGTAAATAAG-GTTAG-CTGCTATGTGTCTGATGACGGTGCAT-CAATGC-TACTGTTC 1067
| ||| | || ||| | ||| ||||| |||||||| ||||| | | |||| |||| ||
Sbjct 1118 CGGTAGA-CAGAGTT-GCCTGTTATGTTTCTGATGATGGTGC-TGCTATGCTTACT-TTT 1173
Query 1068 G-ATACATTGTCTGAAACTTCCGAGTTTGCAAGGAGATGGGTTCCGTTT-TGCAAGAAGT 1125
| | | || || ||||| | |||||||| |||| ||||||||| ||| || ||||| |
Sbjct 1174 GAAGCCCTT-TCAGAAACAGCAGAGTTTGCTAGGAAATGGGTTCC-TTTCTGTAAGAAAT 1231
Query 1126 ACAATGTTGAGCCAAGAGCTCCAGAGTTTTACTTCTCTG--AGAAGATTGATTACTTAAA 1183
||| | | |||||| ||||||| || | || || | || | ||||| ||||| |||||
Sbjct 1232 ACACTATCGAGCCACGAGCTCCCGAATGGTA-TT-TTTGCCACAAGATGGATTATTTAAA 1289
Query 1184 GGATAAAGTCCAAACTACATTCGTCAAAGATCGCAGAGCAATGAAGAGAGAATATGAAGA 1243
| ||||||| || || |||| || | || ||| |||| ||||||||||| ||||||||
Sbjct 1290 GAATAAAGTTCACCCTGCATTTGTTAGGGAACGCCGAGCCATGAAGAGAGATTATGAAGA 1349
Query 1244 ATTCAAAGTGAGGATCAATGCTTTAGTGGCTAAAGCTCAG-AAGAAGCCTGAAGAAGGTT 1302
|||||| || | ||||||||||||||| || | || ||| ||| ||||||||||||||
Sbjct 1350 ATTCAAGGTTAAGATCAATGCTTTAGTTGCGACTGCACAGAAAG-TGCCTGAAGAAGGTT 1408
Query 1303 GG-GTGATGCAAGATGGTACACCATGGCCTGGGAACAACACT-CGTGATCATCCC-GGGA 1359
|| | |||||||| ||||| || ||||| || || ||| | || ||||| ||| || |
Sbjct 1409 GGACT-ATGCAAGACGGTACTCCTTGGCCCGGTAATAAC-GTGCGAGATCA-CCCTGGCA 1465
Query 1360 TGATTCAGGTGTAT-CTCGGTAAAGAA-GGAGCATTCGAC-AT-T-GATGGTAACGAATT 1414
|||| ||||| | | || || ||| || || | | || | || | || ||||| ||
Sbjct 1466 TGATCCAGGTAT-TCCTTGG-AAATAACGGTG--TCCG-CGATGTAGAAAACAACGAGTT 1520
Query 1415 GCCACGCCTCGTGTATGTATCAAGAGAGAAGCGTCCTGG-TTACGCA-CACCACAAGAAA 1472
||| || || || ||||| || | |||||| | || || || | | || ||||||||
Sbjct 1521 GCCTCGGCTGGTTTATGTTTCTCGTGAGAAGAGACCCGGATT-TG-ACCATCACAAGAAG 1578
Query 1473 GCTGGAGCTATGAA-TGCAATGGTTCGAGTCTCAGCAGTGCTCA-CAAATGCTCCAT-TC 1529
|||||||| ||||| | | || | |||||||| | ||| || | |||||||||| | ||
Sbjct 1579 GCTGGAGCCATGAACT-CCCTGATACGAGTCTCTGGAGTTCT-ATCAAATGCTCCTTATC 1636
Query 1530 ATGCTTAATCTTGACTGTGATCATTACATCAACAACAGTAAAGC-CATAAGAGAATCAAT 1588
| || ||| | || |||||||| |||||||| || || ||||| | | |||||| ||||
Sbjct 1637 -TTCTAAATGTCGATTGTGATCACTACATCAATAATAGCAAAGCTC-TTAGAGAAGCAAT 1694
Query 1589 GTGCTTTC-TAATGGATCCACAGCTTGGTAAA-AAGCTTTGTTATGTTCAATTCCCTCAA 1646
||| |||| | |||||||| ||| | || ||| || |||||||||||||||||||||||
Sbjct 1695 GTG-TTTCATGATGGATCCTCAG-TCGGGAAAGAAAATTTGTTATGTTCAATTCCCTCAA 1752
Query 1647 AGATTCGACGGAATCGATCATAAC-GATC-GATACGCTAA-CAGAAACATCGTCTTCTTC 1703
|||||||| || || ||| | || || | ||||| |||| | | || | || ||||||
Sbjct 1753 AGATTCGATGGGATTGATAA-AAGTGA-CAGATACTCTAATC-GTAATGTTGTATTCTTC 1809
Query 1704 GATGTAAACATGAGAGGCTTAGATGGAATT-CAAGGACC-AGTCTACGTAGGAACAGGAT 1761
||| | || |||| ||| || |||||| || ||||| || | | ||||| ||||| || |
Sbjct 1810 GATATTAATATGAAAGGTTTGGATGGA-TTACAAGGGCCTA-TATACGTGGGAACCGGGT 1867
Query 1762 GTGTATTCAATAGACCAGCA-TTATACGGAT 1791
|||| || | |||| |||| || || ||||
Sbjct 1868 GTGTTTTTAGGAGACAAGCACTT-TATGGAT 1897
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 166654584646
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5