BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494916 Length=924 Score E Sequences producing significant alignments: (Bits) Value AT5G48540.1 | Symbols: | receptor-like protein kinase-related ... 1454 0.0 > AT5G48540.1 | Symbols: | receptor-like protein kinase-related family protein | chr5:19668964-19669920 REVERSE LENGTH=957 Length=957 Score = 1454 bits (787), Expect = 0.0 Identities = 881/927 (95%), Gaps = 4/927 (0%) Strand=Plus/Plus Query 1 TAATGAAGACATTAATTGTGAAATGTTCCCTTCTATTGGCTCTTGTATGTAGCTGCAAAG 60 |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || Sbjct 32 TAATGAAGACATTAGTTGTGAAATGTTTCCTTCTATTGGCTCTTGTATGTAGCTGCAGAG 91 Query 61 CAGCAGATTCAATATGGCAACTCTGCAACACAAACTCAAACATCTCAGCAAGCAGCCAAG 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 92 CAGCAGATTCAATATGGCAACTCTGCAACACAAATTCAAACATCTCAGCAAGCAGCCAAG 151 Query 121 TCTCCAAGAACATCGATTCTCTTCTCGCGACGCTTGTCTCAAAGACTCCTTCACAAGGTT 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 152 TCTCCAAGAACATCGATTCTCTTCTCGCGACGCTTGTCTCAAAGACTCCTTCAAAAGGTT 211 Query 181 TCGTGACCACAACTTCTCCAAGTTACAACAAAAAAGAGAAAGTGTATGGACTTGCTCAAT 240 || ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 212 TCAAGACCACAACTTCTTCAAGTTACAACAACAAAGAGAAAGTGTATGGACTTGCTCAAT 271 Query 241 GTAGAGGAGATATCAGCAAGACCGATTGCTCCACGTGTATCCAAGACGCGGCCAAGAAAA 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 272 GTAGAGGAGATATCAGCAATACCGATTGCTCCACGTGTATCCAAGACGCGGCCAAGAAAA 331 Query 301 TCCGTGAAGTATGTCCGAACCAATCTGACTCAAGGATCTTGTACGATTTCTGCTTCTTAC 360 |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 332 TCCGTGAAGTGTGTCAGAACCAATCCGACTCAAGGATCTTGTACGATTTCTGCTTCTTAC 391 Query 361 GTTATAGCCAAGAGAATTTCATAGGGAAGCTTGACACGGGGGCTGGTCTTATATACTTCA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 392 GTTATAGCCAAGAGAATTTCATAGGGAAGCTTGACACGGGGGCTGGTCTTATATACTTCA 451 Query 421 ACGTCGCTAACGTAACCGAAA-CTGACCCCAAAACGTTTGACAATGAGCTTGGGGCACTC 479 ||||||||||||||||||||| | |||||||||| ||| || |||||||| ||||||||| Sbjct 452 ACGTCGCTAACGTAACCGAAATC-GACCCCAAAAAGTTCGATAATGAGCTCGGGGCACTC 510 Query 480 TTTGACAAAATTAGGTCTGAGGCGGTTTTGCCTAAGAGTAAAGGTTTAGGTAAAGGTAAG 539 ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| Sbjct 511 TTTGACAAAATTAGGTCTGAGGCTGTTTTACCTAAGAATAAAGGTTTAGGTAAAGGTAAG 570 Query 540 ACAAAACTGACACCTTTTGTGACACTAAACGGTTTGGTTCAATGCACAAGGGACTTAAGC 599 |||||| ||||||||||||||||||||||||||||||| |||||||| || ||||||||| Sbjct 571 ACAAAATTGACACCTTTTGTGACACTAAACGGTTTGGTCCAATGCACGAGAGACTTAAGC 630 Query 600 GCTTTGGATTGCGCTCAATGCTTTGCAACTGCGGTCGGGAGCTTCATGACAACTTGCCAC 659 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 631 GAATTGGATTGCGCTCAATGCTTTGCAACTGCGGTCGGGAGCTTCATGACAACTTGCCAC 690 Query 660 AACAAGAAGGGATGTCGTGTTTTGTATAGTAGTTGCTATGTCCGGTACGAGTTTTATCCG 719 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 691 AACAAGAAAGGTTGTCGTGTTTTGTATAGTAGTTGCTATGTCCGGTACGAGTTTTATCCG 750 Query 720 TTTTATTTCCCTCTTGATCCGGCTAAAACTGGTCCTAGTGTTGGTAGAATTTCTTCCGTT 779 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 751 TTTTACTTCCCTCTTGATCCGGCTAAAACCGGTCCTAGTGTTGGTAGAATTTCTTCCGTT 810 Query 780 CGTCTCTCTCCGTAATCACAAAGTCTAATAAAAGAGTAAGTTTGACTCTAAAGAGTATAT 839 | ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| Sbjct 811 CATCTCTCTCCGTAATCGCATAGTCTAATAAAAGAGTAAGTTTGTTTCTAAAGAGTATAT 870 Query 840 GTATATGTGTGCAAAATAAGGCTCTCTCCTTTTGTTTCTT-CTTTAAGATGTAAG-CAAT 897 ||||||||||||||||||||||||| | ||| |||||||| |||||||||| ||| |||| Sbjct 871 GTATATGTGTGCAAAATAAGGCTCTTTGCTTATGTTTCTTTCTTTAAGATGCAAGACAAT 930 Query 898 TAAGTTGCCAAGTTATTTGTGTTCTAG 924 ||||| ||||||||||| |||||||| Sbjct 931 TAAGTAACCAAGTTATTTATGTTCTAG 957 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45160498153 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5