BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg494919 Length=2023 Score E Sequences producing significant alignments: (Bits) Value AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type pepti... 2778 0.0 > AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein | chr5:19690542-19693845 REVERSE LENGTH=2130 Length=2130 Score = 2778 bits (1504), Expect = 0.0 Identities = 1900/2080 (91%), Gaps = 72/2080 (3%) Strand=Plus/Plus Query 1 TCGGGACACATCTTTAGGCTC----ATT--ATTG-AAATCAGAATTCTCTAGAGAAACCC 53 ||||||||||||||||||||| ||| | || ||||||||| |||||||| |||||| Sbjct 1 TCGGGACACATCTTTAGGCTCAAGGATTCAAATGAAAATCAGAAGTCTCTAGAAAAACCC 60 Query 54 AAAAAGCActctcttcactctctctctctcCCTATAAATTCTCATCACAA-TT-T--ACC 109 |||| |||||| || || || ||| | ||||||||||||||||||||| || | | | Sbjct 61 CAAAA-CACTCT-TT--CT-TCACTC-C-CCCTATAAATTCTCATCACAATTTCTCAAAC 113 Query 110 CAACT--T-TCT--CAACACA--CT-T-G--TTACGCTC-T--CTA-C-AATT--CTCTC 151 || || | ||| ||||||| || | | || | ||| | || | | || ||||| Sbjct 114 CATCTCATCTCTGCCAACACACTCTCTAGAATT-CTCTCGTGATTATCGATTTCACTCTC 172 Query 152 GTAATTTTTGATCAG-AAATGGAAGACGATTTTGACATGCAG---CAGTTTCCAGAAGAG 207 ||| ||||||||| |||||||||||||||| |||| |||| |||||||| |||||| Sbjct 173 TTAA-ATTTGATCAGAAAATGGAAGACGATTTCGACACGCAGAACCAGTTTCCGGAAGAG 231 Query 208 GAACCAGAGGAGATGGATATGGATCTCGCCGACGACGACGAAGCTGACTCTGCTCCTAAT 267 || |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| || Sbjct 232 GAGCCAGAGGAGATGGATATGGATCTCCCCGACAATGACGAAGCTGACTCTGCTCCTTAT 291 Query 268 CTGAAAATCGGCGAGGAGAA-GGAGATCGGAAAATCAGGATTGAAGAAGAAACTTGTTAA 326 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 292 CTGAAAATCGGCGAGGA-AATGGAGATCGGAAAATCAGGATTGAAGAAGAAACTTGTTAA 350 Query 327 GGAAGGTGAAAAATGGGATATACCTGAGAATGGAGACGAAGTTGAAGTGCATTACACGGG 386 |||| ||||||||||||| | |||||||| || ||||||||||||||||||||||| || Sbjct 351 GGAATGTGAAAAATGGGACACGCCTGAGAACGGTGACGAAGTTGAAGTGCATTACACTGG 410 Query 387 AACTTTGTTAGATGGTACCAAGTTCGATTCGAGCCGTGACAGAGGAACTCCTTTCAAATT 446 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 411 AACTTTGTTAGATGGTACCAAGTTTGATTCGAGCCGTGACAGAGGAACTCCTTTCAAATT 470 Query 447 CACTCTTGGCCAAGGACATGTGATCAAAGGATGGGACTTGGGGATCAAGACAATGAAGAA 506 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 471 TACTCTTGGCCAAGGACATGTCATTAAAGGATGGGACTTGGGGATCAAGACAATGAAGAA 530 Query 507 AGGTGAAAATGCTATTTTCACCATTCCGCCTGAGTTGGCTTATGGTGAAACCGGTTCACC 566 ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct 531 AGGTGAAAATGCTATTTTCACCATTCCTCCTGAGCTGGCATATGGTGAAACCGGTTCACC 590 Query 567 ACCGACTATTCCTCCGAACGCTACTCTTCAATTTGATGTGGAGTTGATATCATGGAGGAG 626 |||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 591 GCCGACTATACCTCCGAACGCTACTCTTCAGTTTGATGTGGAGTTGATAGCATGGAGGAG 650 Query 627 TGTTAAGGATATATGTGGTGATGGTGGGGTGTTTAAGAAAATAATTGTGGAAGGAGAAAA 686 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 651 TGTTAAGGATATATGTGGTGATGGTGGTGTGTCTAAGAAAATAATTGTGGAAGGAGAAAA 710 Query 687 ATGGGAGAAGCCAAAGGATCTTGATGAAGTGTATGTCAAGTATGAAGCTCGGCTTGAGGA 746 ||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||| Sbjct 711 ATGGGAGAAGCCAAAAGACCTTGATGAAGTTTACGTCAAGTATGAAGCTCGGCTTGAGGA 770 Query 747 TGGCACCATTGTTGGAAGGTCTGATGGTGCAGAGTTCACTGTCAAGGAGGGCCATTTCTG 806 ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| Sbjct 771 TGGCACCATTGTTGGAAAGTCTGATGGTGTAGAGTTTACTGTCAAGGAGGGCCATTTCTG 830 Query 807 TCCTGCGCTTGCTAAGGCTGTCAAAACCATGAAAAGAGGGGAGAAGGTTCTCCTAACTGT 866 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 831 TCCTGCGCTTTCTAAGGCTGTCAAAACCATGAAAAGAGGGGAGAAGGTTCTCCTGACTGT 890 Query 867 GAAGCCACAATATGGCTTTGGGGAAATTGGAAGACCAGCTTCTGATGGCCTTCAAGCTGC 926 ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 891 GAAGCCACAATATGGATTTGGGGAATTTGGAAGACCAGCTTCTGATGGTCTTCAAGCTGC 950 Query 927 AATCCCACCAAATGTGACTCTTCAAATCGACCTTGAGTTGGTTTCTTGGAAGACGGTGGT 986 |||||||||||||| || ||||| || |||||||||||||||||||||||||| ||||| Sbjct 951 AATCCCACCAAATGCAACCCTTCAGATTGACCTTGAGTTGGTTTCTTGGAAGACTGTGGT 1010 Query 987 GGAAGTAACTGATGACAAGAAGGTCATTAAGAAAATACTGAAGGAAGGAGAAGGATATGA 1046 ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| Sbjct 1011 GGAAGTAACTGATGACAGGAAGGTTATTAAGAAAATACTCAAGGAAGGAGAAGGATATGA 1070 Query 1047 GCGTCCTAATGAAGGAGC-AGTTGTCAAATTGAAGTTGATTGGTAAACTTCAAGATGGAA 1105 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 1071 GCGTCCCAATGAAGGAGCGA-TTGTCAAATTGAAGTTGATTGGTAAACTTCAAGATGGAA 1129 Query 1106 CT---GTGTTCATGAAGAAAGGTTATGAAGAAGATGAGGAACCATTCGAGTTCAAAACTG 1162 | ||||| ||||||||||| |||||||||||||||| || ||||||||||| | || Sbjct 1130 CAACCGTGTTTGTGAAGAAAGGTCATGAAGAAGATGAGGAGCCGTTCGAGTTCAAGATTG 1189 Query 1163 ATGAAGAACAAGTAATTGAAGGGCTTGAAAAAGCTGTGATGGGCATGAAGAAGGGTGAGG 1222 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1190 ATGAAGAACAAGTGATAGAAGGGCTTGAAAAAGCTGTGATGGGCATGAAGAAGGGTGAGG 1249 Query 1223 TAGGACTCATAACAATTTCACCGGAATATGCTTTTGGTTCCTCTGAATCAAAGCAGGAGC 1282 ||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1250 TAGCACTCATCACAATTTCACCGGAATATGCTTTTGGTTCCTCTGAATCAAAACAGGAGC 1309 Query 1283 TGGCTGTAATACCGCCAAACTCGACTGTATTCTACGAGGTTGAGCTGGTATCTTTCATCA 1342 |||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||| Sbjct 1310 TGGCTGTAATACCGCCAAACTCGACTGTATACTATGAGGTCGAGTTGGTATCTTTCATCA 1369 Query 1343 AGGAGAAAGAGTCTTGGGATATGAACACGCAGGAAAAGATAGAAGCTGCAGGCAAGAAGA 1402 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 1370 AGGAGAAAGAGTCTTGGGATATGAACACACAGGAAAGGATAGAAGCTGCAGGCAAGAAGA 1429 Query 1403 AGGAAGAAGGGAATATGCTGTTCAAAGCTGGAAAATACGCGAGAGCTTCAAAGAGATATG 1462 | |||||||| ||| || |||||||||||||||||||||| ||||||||||||||||| | Sbjct 1430 AAGAAGAAGGCAATGTGTTGTTCAAAGCTGGAAAATACGCAAGAGCTTCAAAGAGATACG 1489 Query 1463 AGAGGGGTGTCAAGTACATAGAATATGAGTCAACTTTCGACGAAGAGGAGAAAAAGAAAG 1522 ||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1490 AGAGGGGTGTCAAATATATAGAATATGACTCAACTTTCGACGAAGAGGAGAAAAAGAAAT 1549 Query 1523 CAAAAGATCTCAAGATTGCCTGTAACCTTAATGATGCAGCTTGCAAGCTGAAACTGAAAG 1582 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1550 CAAAAGATCTCAAGATTGCCTGTAACCTGAATGATGCAGCTTGCAAGCTGAAACTGAAAG 1609 Query 1583 ATTACAAGGAAGCAGCAAAATTGTCCACTAAGGTGTTGGAGATGGATAGTAGGAACGTGA 1642 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1610 ATTACAAGGAAGCAGCAAAATTGTCCACAAAGGTGTTGGAGATGGATAGTAGGAACGTGA 1669 Query 1643 AGGCAATGTTTAGGAGAGCACATGCCTACATGGAGACGGCAGATCTTGATTTAGCTGAGC 1702 ||||||||| ||||||||||||||||||| |||||||||| ||||||||| | ||||||| Sbjct 1670 AGGCAATGTATAGGAGAGCACATGCCTACTTGGAGACGGCGGATCTTGATCTGGCTGAGC 1729 Query 1703 TTGATATCAAGAAAGCTCTCGAAATCGATCCTGACAACAAGGAGGTGAAGATAGAATATA 1762 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1730 TTGATATCAAGAAAGCTCTCGAAATCGATCCAGACAACAAGGAGGTGAAGATAGAATATA 1789 Query 1763 AGAAGTTGAAGGAGAAGGTGAAAGAGTACAACAAGAAAGATGCTAAGTTTTACAGCAACA 1822 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1790 AGAAGTTGAAGGAGAAGGTGAAAGAGTATAACAAGAAAGATGCTAAGTTTTACAGCAACA 1849 Query 1823 TGTTGTCGAAAATGCTTGAGCCACACAAAGGA-----G-------C----G--ATGAGTA 1864 |||||||||||||||||||||||||||||||| | | | ||||||| Sbjct 1850 TGTTGTCGAAAATGCTTGAGCCACACAAAGGAACTCAGAAGGAAGCACAAGCGATGAGTA 1909 Query 1865 TTGACACCAAGGCATGAGTCTTTAAATCACTTTAGAGAGTAACATTGATTCCAAAAAGTA 1924 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || Sbjct 1910 TTGACACCAAGGCATGAGTCTTTGAATCACTTTAGAGAGTCGCATTGATTCCAAAAACTA 1969 Query 1925 AATGTGAAGAGTCTGTAATTTTCTGTTTT-ACTCTTTGTAATCAATCTTGGTGTGTGTTA 1983 |||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||| Sbjct 1970 AATGTGAAAAGTCTACAAATTTCTGTTTTTACTCTTTGTAATCAATCTTGGTGTGTGTTA 2029 Query 1984 CTGTTTCAGACGTTGTTGAAATAAAACAGACTTGTAATAA 2023 |||||||||| |||||| | ||||||||||||||||||| Sbjct 2030 CTGTTTCAGA-GTTGTT-A--TAAAACAGACTTGTAATAA 2065 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100250488365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5