BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495055 Length=1917 Score E Sequences producing significant alignments: (Bits) Value AT5G49990.1 | Symbols: | Xanthine/uracil permease family prote... 3005 0.0 > AT5G49990.1 | Symbols: | Xanthine/uracil permease family protein | chr5:20337641-20341881 REVERSE LENGTH=1935 Length=1935 Score = 3005 bits (1627), Expect = 0.0 Identities = 1838/1937 (95%), Gaps = 25/1937 (1%) Strand=Plus/Plus Query 1 ATAACGAAACGTAGACAACTGTCCCCTCTGCTCcttcctcttc-a----c-t-gc-t--- 49 ||| |||||||||||||||||||||||||||||||||||| || | | | | | Sbjct 1 ATAGCGAAACGTAGACAACTGTCCCCTCTGCTCCTTCCTCATCAAGCCTCTTCTCTTCAC 60 Query 50 t-cttcttcttcaagtttactct-catattttcttctgctgcttcttcttcaCAAGAGGT 107 | |||||||||| |||||||||| || |||||||||||||||| |||||||||||||||| Sbjct 61 TGCTTCTTCTTCTAGTTTACTCTCCA-ATTTTCTTCTGCTGCTGCTTCTTCACAAGAGGT 119 Query 108 TGAAG-ATGTCAGCTCCTAAATCGGGTGGTGATCCACTGCCACATCCGCCGAAAGAACAG 166 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 120 TGAAGAATGTCAGCTCCGAAATCGGGTGGTGATCCACTACCACATCCGCCGAAAGAACAG 179 Query 167 CTTCCCGATATCTCTTACTGCATTACAAGCCCTCCTCCATGGCCTGAGGCTGTTCTACTT 226 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 180 CTTCCAGATATCTCTTACTGCATTACAAGTCCTCCTCCATGGCCTGAGGCTGTTCTGCTT 239 Query 227 GGGTTTCAACACTACCTTGTGATGCTTGGAACAACAGTTCTGATTCCTTCGGCTCTTGTT 286 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 240 GGGTTTCAACACTACCTTGTGATGCTTGGAACAACAGTTCTGATTCCATCGGCTCTTGTT 299 Query 287 CCACAAATGGGAGGTGGAAATGAAGAGAAGGCGAAGCTGATCCAGACAATACTGTTTGTA 346 ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| Sbjct 300 CCACAAATGGGAGGTAGAAATGAAGAGAAGGCAAAGCTGATCCAGACAATATTGTTTGTA 359 Query 347 GCTGGATTGAACACGTTGCTCCAGACAGTGTTTGGAACTAGATTACCTGCTGTCATTGGA 406 |||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||| Sbjct 360 GCTGGATTGAACACACTGCTCCAAACTGTGTTTGGAACTAGATTACCTGCTGTTATTGGA 419 Query 407 GCATCTTATACATATGTCCCAGTTACAATCTCAATCATGCTTTCTGGAAGATTCAATGAC 466 ||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct 420 GCATCTTATACATTTGTCCCGGTTACTATCTCAATCATGCTTTCTGGGAGATTCAATGAC 479 Query 467 GTTGCAGATCCAGTTGAACGATTTAAGAGGATAATTCGGGCAACCCAAGGTGCT-TTAAT 525 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || || Sbjct 480 GTTGCAGATCCAGTTGAGCGATTTAAGAGGATAATTCGGGCAACCCAAGGTGCTCTT-AT 538 Query 526 TGTTGCTTCAACTCTTCAAATGATCCTTGGCTTCAGTGGCCTCTGGCGCAATGTTGTAAG 585 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct 539 TGTTGCTTCAACTCTTCAAATTATCCTTGGCTTCAGTGGCCTTTGGCGTAATGTTGTAAG 598 Query 586 GTTCTTAAGTCCTCTATCTGCTGCTCCTCTGGTTGGATTAGTTGGTTATGGCCTGTACGA 645 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 599 GTTCTTAAGTCCACTATCTGCTGCTCCTTTGGTTGGATTAGTTGGTTATGGCCTGTACGA 658 Query 646 GTTGGGTTTTCCTGGTGTTGCTAAGTGTATCGAGATTGGACTGCCGGGGCTTATAATTCT 705 ||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 659 GTTAGGTTTTCCCGGTGTTGCTAAGTGTATTGAGATTGGACTGCCTGGGCTTATTATTCT 718 Query 706 TATACTAATATCACAGTACATGCCCCATGTTATAAAAGGAGGAAAACATGTGTTTGCTCG 765 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 CATACTAATATCACAGTACATGCCCCATGTTATAAAAGGAGGAAAACATGTGTTTGCTCG 778 Query 766 CTTTGCTGTCATATTTTCTGTGGCGATAGTATGGCTTTTTGCTTTCTTTCTTACACTTGG 825 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 779 CTTTGCTGTCATATTTTCTGTGGCGATAGTATGGCTTTATGCTTTCTTTCTTACACTTGG 838 Query 826 TGGTGCCTATAATGGTGTTGGGACAAATACTCAAAGAAGCTGTCGGACTGATCGTGCTGG 885 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 839 TGGTGCCTATAATGGTGTTGGGACAGATACTCAAAGAAGCTGTCGGACTGATCGCGCTGG 898 Query 886 GCTTATAAGTGCTGCTCCATGGATAAGAGTTCCATGGCCATTCCAATGGGGCGCACCATT 945 ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct 899 GCTTATAAGTGCTGCTCCATGGATAAGAGTTCCGTGGCCTTTCCAATGGGGAGCACCATT 958 Query 946 GTTTGATGCTGGTGAAGCCTTTGCCATGATGATGGCTTCTTTTGTTGCTCTTGTTGAGTC 1005 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 959 GTTTGATGCTGGTGAAGCATTTGCCATGATGATGGCTTCTTTTGTTGCTCTTGTTGAGTC 1018 Query 1006 CACAGGTGCTTTTATTGCTGTCTCAAGATATGCTAGTGCTACAATGCCGCCACCTTCTGT 1065 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1019 CACAGGTGCTTTTATTGCCGTCTCAAGATATGCTAGTGCCACAATGCCGCCACCTTCTGT 1078 Query 1066 TATCAGCCGTGGGGTTGGTTGGCAGGGAGTTGCAATTTTAATCTCAGGGTTGTTCGGAAC 1125 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 TATCAGCCGCGGGGTTGGTTGGCAGGGAGTTGCAATTTTAATCTCAGGGTTGTTCGGAAC 1138 Query 1126 TGGTATAGGGTCTTCAGTTTCTGTCGAGAATGCGGGTCTACTGGCACTAACAAAAATTGG 1185 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1139 TGGTATAGGGTCTTCAGTTTCTGTCGAGAATGCGGGTCTGCTGGCACTAACAAAAATTGG 1198 Query 1186 TAGCAGGAGAGTTGTCCAAATATCTGCAGGCTTTATGATATTCTTCTCAATTCTTGGGAA 1245 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 TAGCAGGAGAGTTGTTCAAATATCTGCAGGCTTTATGATATTCTTCTCAATTCTTGGGAA 1258 Query 1246 GTTTGGGGCAGTGTTTGCATCAATACCTGCTCCTATCATTGCCGCCTTGTACTGTCTCTT 1305 ||| |||||||| |||||||| |||||| |||||||||| || ||||||||||||||||| Sbjct 1259 GTTCGGGGCAGTATTTGCATCCATACCTTCTCCTATCATAGCTGCCTTGTACTGTCTCTT 1318 Query 1306 CTTTGCGTATGTTGGTGCTGGAGGACTGAGTTTGCTGCAATTTTGCAATCTGAATAGCTT 1365 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1319 CTTTGCGTATGTAGGTGCTGGAGGACTGAGTTTGCTGCAATTCTGCAACCTGAATAGCTT 1378 Query 1366 CAGGACATTGTTCATATTGGGCTTCTCAATCTTCCTAGGCCTATCAATTCCACAATATTT 1425 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 CAGGACATTATTCATACTGGGCTTCTCAATCTTCCTAGGCCTATCAATTCCACAATATTT 1438 Query 1426 CAACGAGCACACAGCCATCAAAGGCTATGGTCCAGTTCATACCGGGGCAAGATGGTTCAA 1485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 CAACGAGCACACAGCCATCAAAGGCTATGGTCCAGTTCATACCGGGGCAAGATGGTTCAA 1498 Query 1486 CGACATGGTCAATGTGCCCTTCTCGTCCAAGGCGTTTGTGGGAGGATGTGTGGCTTACTT 1545 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1499 CGACATGGTCAATGTGCCCTTCTCGTCCAAGGCCTTTGTGGGAGGATGTGTGGCTTACTT 1558 Query 1546 GTTGGACACGACGCTCCACAAGAAAGATGGTTCGATCAGGAAAGACCGAGGTAAACACTG 1605 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 GTTGGACACGACGCTTCACAAGAAAGATGGTTCGATCAGGAAAGACCGAGGTAAACACTG 1618 Query 1606 GTGGGACAGATTCTGGACTTTCAAGAACGACCCGAGAACCGAAGAGTTCTATGCTCTTCC 1665 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1619 GTGGGACAGATTCTGGACTTTCAAGAACGACCCGAGAACAGAAGAGTTCTATGCTCTTCC 1678 Query 1666 TTTCAATCTCAACAAATACTTCCCTTCTGTCTGAAAAA---TCCTTACAAACTTTTATGT 1722 ||||| ||||||||||| ||||||||||||||||||| ||||| |||||||| ||| Sbjct 1679 GTTCAACCTCAACAAATATTTCCCTTCTGTCTGAAAAAAAATCCTTCCAAACTTT-ATGG 1737 Query 1723 AATGCTATTTTGCTAGTGTTGTGTCCCTTAGGAGGACACAGCTTATCTAGCTAGGTTT-A 1781 |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| | Sbjct 1738 AATGCTGTTTTGCTAGTTTTGTGTCCCTTAGGAGGACACACCTTATCTAGCTAGGTTTTA 1797 Query 1782 TGTGCATATTCGGTGAGGAGACTCTAAA-CGCAACTAGATATTATAACCCAAAGTGTTTA 1840 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct 1798 TGTGCATATTCGGTGAGGAGACTATAAAACGCAACTAGATATTATAACCCAAAGTGTTAA 1857 Query 1841 GTAACATTTTAGAAACATTACTGTGATGTTTGTTTCTTATGTTTAGATGTTTTGCATTAA 1900 ||||||||||||||| |||| |||||||||| || || |||||||||||||||||||||| Sbjct 1858 GTAACATTTTAGAAATATTAATGTGATGTTTCTT-CT-ATGTTTAGATGTTTTGCATTAA 1915 Query 1901 AGATGATACTCGTTTTG 1917 ||||||||||||||||| Sbjct 1916 AGATGATACTCGTTTTG 1932 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94929230595 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5