BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495247 Length=1984 Score E Sequences producing significant alignments: (Bits) Value AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | phosphoglucomu... 2977 0.0 > AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | phosphoglucomutase | chr5:21063368-21068057 REVERSE LENGTH=2159 Length=2159 Score = 2977 bits (1612), Expect = 0.0 Identities = 1884/2009 (94%), Gaps = 43/2009 (2%) Strand=Plus/Plus Query 1 ATGACGTCGACCTACACGAGATTCGATACCGTATTTCTCTTTTCTAGGTTCGCCGGCGCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 ATGACGTCGACCTACACGAGATTCGATACCGTATTTCTCTTTTCTAGGTTCGCCGGCGCT 184 Query 61 AAGTATTCGCCGTTGTTTCCCTCACCTTCTTCGTCACACTCTTCTCTTCTACCTTCCGGA 120 |||||||||||||| || || | || | |||| | ||| | |||| ||||||| Sbjct 185 AAGTATTCGCCGTTATTGCCGT---CTCCGTCGT-TTA--CTT-T-ATCTA-CTTCCGGC 235 Query 121 ATTCATCTTAGAACCAAACCGACTTCGCGTTTACACTCGATTATCGCATCCTCTTCATC- 179 |||||| | ||||||||||||| ||| ||||| ||||||||||| |||||||| ||||| Sbjct 236 ATTCATATCAGAACCAAACCGAATTCTCGTTTTCACTCGATTATAGCATCCTCCTCATCT 295 Query 180 T-ATC----GTCGCCGGAACTGAAAGCATTGAGATTAAATCGTTGCCGACGAAGCCTATT 234 | ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 296 TCATCTGTAGTCGCCGGAACTGATAGCATTGAGATTAAATCGTTGCCGACGAAGCCTATT 355 Query 235 GAAGGACAAAAGACTGGAACTAGCGGACTCCGGAAGAAGGTGAAAGTTTTCATGGAAGAG 294 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 GAAGGACAAAAGACTGGAACTAGCGGACTCCGGAAGAAGGTGAAAGTTTTCATGGAAGAT 415 Query 295 AATTATCTAGCCAATTGGATTCAGGCATTGTTTAATTCATTGCCACTGGAGAATTATAAG 354 |||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 416 AATTATTTAGCCAACTGGATTCAGGCATTGTTTAATTCATTGCCACTTGAGGATTATAAG 475 Query 355 AATGCGACGTTGGTTTTAGGAGGTGATGGTCGTTACTTTAACAAAGAAGCTTCACAGATC 414 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 AATGCAACGTTGGTTTTAGGAGGTGATGGTCGTTACTTTAACAAAGAAGCTTCACAGATC 535 Query 415 ATTATTAAAATTGCTGCTGGGAATGGAGTTGGGCAAATTTTAGTTGGAAAGGAAGGCATT 474 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 536 ATTATCAAAATTGCTGCTGGGAATGGAGTTGGACAAATTTTAGTTGGAAAGGAAGGCATT 595 Query 475 TTGTCAACCCCAGCGGTTTCCGC-----T-------------GCAAATGGAGGATTCATT 516 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct 596 TTGTCAACCCCAGCGGTTTCCGCTGTAATCAGGAAAAGAAAGGCAAATGGAGGATTCATT 655 Query 517 ATGAGTGCAAGTCATAATCCTGGTGGACCTGAATATGACTGGGGTATCAAGTTCAATTAC 576 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 ATGAGTGCAAGCCATAATCCTGGTGGACCTGAATATGACTGGGGTATCAAGTTCAATTAC 715 Query 577 AGCAGTGGTCAGCCTGCTCCTGAAACCATTACTGACAAAATTTATGGAAATACACTTTCA 636 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 716 AGCAGTGGTCAGCCTGCTCCTGAAACCATTACTGACAAAATATATGGAAATACACTTTCA 775 Query 637 ATCTCTGAGATTAAGGTGGCAGAGATTCCCGACATTGATCTTTCTCATGTTGGAGTTACC 696 ||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| Sbjct 776 ATCTCTGAGATTAAGGTGGCAGAGATTCCTGATATTGATCTTTCTCAAGTTGGAGTGACC 835 Query 697 AAATATGGGAATTTCAGTGTGGAAGTTATAGATCCTGTTTCTGACTACTTGGAGCTCATG 756 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| Sbjct 836 AAATATGGGAATTTCAGTGTAGAAGTTATAGATCCTGTTTCCGACTATTTGGAGCTCATG 895 Query 757 GAGGACGTGTTCGACTTTGATCTCATCAGAGGTCTTCTTTCAAGATCAGATTTTGGGTTT 816 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GAGGATGTTTTCGACTTTGATCTCATCAGAGGTCTTCTTTCAAGATCAGATTTTGGGTTC 955 Query 817 ATGTTTGATGCCATGCATGCTGTTACTGGTGCTTATGCGAAACCAATCTTTGTCGATAAT 876 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 956 ATGTTTGATGCCATGCATGCTGTTACTGGTGCTTATGCGAAACCAATTTTTGTCGACAAT 1015 Query 877 CTTGGAGCCAAACCGGATTCAATTTCCAATGGAGTTCCCCTGGAAGATTTTGGGCATGGC 936 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1016 CTTGGAGCCAAACCGGATTCAATTTCCAACGGAGTTCCCCTGGAAGATTTTGGGCATGGC 1075 Query 937 CATCCAGATCCTAATTTAACATATGCAAAGGATTTGGTTGATGTCATGTATCGTGACAAT 996 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1076 CATCCTGATCCTAATTTGACATATGCAAAGGATTTGGTTGATGTCATGTATCGTGACAAT 1135 Query 997 GGACCTGATTTCGGAGCAGCAAGTGATGGTGATGGTGACAGAAATATGGTTTTAGGAAAC 1056 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 GGACCGGATTTCGGAGCAGCAAGTGATGGTGATGGTGACAGAAATATGGTTTTAGGAAAC 1195 Query 1057 AAGTTCTTTGTCACTCCTTCAGACTCTGTCGCTATCATCGCTGCCAATGCACAAGAAGCA 1116 || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1196 AAATTCTTTGTCACTCCTTCAGACTCTGTAGCTATCATCGCAGCCAATGCACAAGAAGCA 1255 Query 1117 ATTCCATATTTCCGTGCTGGTCCTAAGGGGCTAGCACGCTCTATGCCAACAAGTGGTGCT 1176 |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct 1256 ATTCCATATTTCCGTGCTGGTCCTAAGGGGCTGGCACGTTCTATGCCGACAAGTGGTGCT 1315 Query 1177 CTTGATCGTGTTGCGGAGAAGTTGAAGCTTCCTTTCTTCGAGGTTCCCACCGGATGGAAA 1236 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1316 CTTGATCGTGTTGCCGAGAAGTTGAAGCTTCCTTTCTTCGAGGTTCCCACTGGATGGAAA 1375 Query 1237 TTTTTTGGAAATCTTATGGATGCTGGAAAATTGTCAATCTGTGGAGAAGAGAGTTTTGGC 1296 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1376 TTTTTTGGAAATCTTATGGATGCTGGAAAATTGTCAATCTGTGGAGAAGAGAGCTTTGGC 1435 Query 1297 ACAGGTTCTGATCACATCCGTGAGAAAGATGGCATATGGGCTGTGTTGGCGTGGCTTTCG 1356 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1436 ACAGGTTCTGATCACATCCGTGAGAAGGATGGAATATGGGCTGTGTTGGCGTGGCTTTCG 1495 Query 1357 ATCCTAGCTCATCGCAACAAGGACACAAAACCAGGGGACAAGTTGGTGTCTGTTGCAGAT 1416 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1496 ATCCTTGCTCATCGCAACAAGGACACGAAACCAGGGGACAAGTTGGTGTCTGTTGCAGAT 1555 Query 1417 GTTGTAAAAGAGTATTGGGCGACATACGGAAGGAACTTTTTCTCAAGATACGACTATGAA 1476 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1556 GTTGTGAAAGAGTATTGGGCGACATACGGAAGGAACTTTTTTTCAAGATACGACTATGAA 1615 Query 1477 GAGTGTGAATCTGAAGGAGCCAATAAAATGATCGAGTATCTGAGAGATATCGTGTCTAAA 1536 || |||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| Sbjct 1616 GAATGTGAATCTGAAGGAGCCAATAAAATGATCGAGTATCTTAGAGAAATCTTGTCTAAG 1675 Query 1537 AGCAAGGCCGGTGAAAG-TTATGGAAACTATGTCCTCCAGTTTGCAGATGACTTTTCATA 1595 ||||||||||||| | | |||||||||||||||||||||||||||||||||||| ||||| Sbjct 1676 AGCAAGGCCGGTG-ACGTTTATGGAAACTATGTCCTCCAGTTTGCAGATGACTTCTCATA 1734 Query 1596 CACAGACCCTGTTGATGGAAGTGTTGCATCCAAGCAAGGTGTTCGGTTTGTGTTCACGGA 1655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 CACAGACCCTGTTGATGGAAGTGTTGCATCCAAGCAAGGTGTTCGGTTTGTGTTCACGGA 1794 Query 1656 TGGATCCAGAATCATATTTCGTTTATCCGGAACTGGTTCGGCTGGAGCTACAGTTCGAAT 1715 |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct 1795 TGGATCCAGAATCATATTTCGTTTATCCGGAACTGGCTCAGCTGGAGCTACAGTGCGAAT 1854 Query 1716 ATACATTGAACAATATGAGCCAGACGTTTCAAAGCATGATGTTGATGCACAAATAGCTCT 1775 |||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1855 ATACATTGAACAATTTGAGCCAGACGTTTCAAAACATGATGTGGATGCACAAATAGCTCT 1914 Query 1776 AAAACCTTTAATTGATCTTGCATTGTCTGTATCAAAGCTGAAGGAATTCACAGGGAGGGA 1835 ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1915 TAAACCTTTAATCGATCTTGCATTGTCTGTATCAAAGCTGAAGGACTTCACAGGGAGGGA 1974 Query 1836 GAAGCCCACTGTCATCACATGAAGAATAAAATCCTGTGTCACATGGTCTTTTTGAAAAGG 1895 ||||||||||||||| ||||||||| || ||||||||||||| ||| || |||| Sbjct 1975 GAAGCCCACTGTCATTACATGAAGAG-AA------GTGTCACATGGTCCTTTCGATAAGG 2027 Query 1896 CAAGTTGGGTTCCTGACTTCAGTTTTGTCTGCCATGTTTATTTGAAAAATTCCAGAGCAA 1955 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2028 CAATTTGGGTTCCTGACTTCAGTTTTGTCTGCCATGTTTATTTGAAAA-TTCCAGAGCAA 2086 Query 1956 TGAAATGCTTATCAGTGTAACATATATAA 1984 ||||||||||||| |||||||||||||| Sbjct 2087 TGAAATGCTTATCCTTGTAACATATATAA 2115 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98292667110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5