BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495334
Length=2342
Score E
Sequences producing significant alignments: (Bits) Value
AT5G52640.1 | Symbols: HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90... 3591 0.0
AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN ... 1509 0.0
> AT5G52640.1 | Symbols: HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90.1,
AtHsp90-1, HSP90.1 | heat shock protein 90.1 | chr5:21352399-21355361
FORWARD LENGTH=2475
Length=2475
Score = 3591 bits (1944), Expect = 0.0
Identities = 2203/2330 (95%), Gaps = 9/2330 (0%)
Strand=Plus/Plus
Query 1 TCTATAAATTCACTTTGTGTTTTCCTCTCTTCTTCATAAATCAAGAAAACAATCACAAAt 60
|||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 TCTATAAAATCACTTTGTTTTTTCCTCTCTTCTTCATAAATCAACAAAACAATCACAAAT 60
Query 61 ctctcgaaacgctctctaagttctaaa-tctctc-tcgcattctctttcgtttctcgTTT 118
|||||||||||||||| |||||| ||| | |||| | |||||||||||||||||||||||
Sbjct 61 CTCTCGAAACGCTCTCGAAGTTCCAAATTTTCTCTTAGCATTCTCTTTCGTTTCTCGTTT 120
Query 119 GCGTTGAATCAAAGATCGTGTTACGATGGCGGAAGTTCAGATGGCTGACGCAGAGACTTT 178
|||||||||||||| || ||| |||||||||| |||||||||||||| |||||||||||
Sbjct 121 GCGTTGAATCAAAGTTC--GTTGCGATGGCGGATGTTCAGATGGCTGATGCAGAGACTTT 178
Query 179 TGCTTTCCAAGCGGAGATTAACCAGCTTCTTAGCTTGATCATCAACACTTTCTACAGCAA 238
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 179 TGCTTTCCAAGCTGAGATTAACCAGCTTCTTAGCTTGATCATCAACACGTTCTACAGCAA 238
Query 239 CAAAGAGATTTTCCTCCGTGAGCTCATCAGTAACTCTTCTGATGCTCTTGACAAGATTCG 298
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 239 CAAAGAAATCTTCCTCCGTGAGCTCATCAGTAACTCTTCTGATGCTCTTGACAAGATCCG 298
Query 299 ATTTGAGAGCTTGACCGATAAGAGCAAGCTCGATGGACAGCCTGAGCTCTTCATTAGATT 358
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 299 ATTTGAGAGCTTAACGGATAAGAGCAAGCTCGATGGACAGCCTGAACTCTTCATTAGATT 358
Query 359 GGTTCCAGATAAGGCTAACAAGACGCTCTCGATTATCGATAGTGGTATTGGCATGACCAA 418
|||||| || ||| |||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct 359 GGTTCCTGACAAGTCTAATAAGACGCTCTCAATTATTGACAGTGGTATTGGCATGACCAA 418
Query 419 AGCAGATCTGGTGAACAACTTGGGAACCATTGCGAGGTCTGGAACCAAGGAGTTTATGGA 478
||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 419 AGCAGATTTGGTGAACAACTTGGGAACCATTGCGAGGTCTGGAACAAAAGAGTTTATGGA 478
Query 479 AGCACTTCAAGCTGGAGCTGATGTGAGCATGATAGGTCAATTTGGTGTTGGTTTCTACTC 538
|| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 479 GGCGCTTCAAGCTGGAGCTGATGTAAGCATGATAGGACAATTTGGTGTTGGTTTCTACTC 538
Query 539 TGCTTATCTTGTTGCAGAGAAGGTTATTGTTACTACAAAGCACAATGATGATGAACAATA 598
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 539 TGCTTATCTTGTTGCAGAGAAGGTTGTTGTCACTACAAAGCACAATGATGATGAACAATA 598
Query 599 CGTCTGGGAGTCTCAAGCTGGTGGTTCCTTCACTGTTACTAGGGATGTGGATGGGGAACC 658
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 599 CGTTTGGGAGTCTCAAGCTGGTGGTTCCTTCACTGTCACTAGGGATGTGGATGGGGAACC 658
Query 659 ACTTGGTAGAGGAACTAAGATAACATTATTCCTCAAGGATGATCAGCTTGAATACTTGGA 718
||||||||||||||||||||| || | ||||| ||||| ||||||||||||||||||||
Sbjct 659 ACTTGGTAGAGGAACTAAGATCACCCTCTTCCTTAAGGACGATCAGCTTGAATACTTGGA 718
Query 719 GGAGAGGAGACTCAAAGACTTGGTAAAGAAGCACTCTGAGTTCATCAGTTACCCGATTTA 778
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 719 GGAGAGGAGACTCAAAGACTTGGTGAAGAAGCACTCTGAGTTCATCAGTTACCCTATCTA 778
Query 779 TCTGTGGACCGAGAAAACCACTGAGAAGGAGATCAGtgatgatgaggatgaagatgaacc 838
|| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 779 CCTTTGGACCGAGAAAACCACCGAGAAGGAGATCAGTGACGATGAGGATGAAGATGAACC 838
Query 839 aaagaaagaaaatgaaggtgaggttgaagaagttgatgaggagaaggagaaagatggtaa 898
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 AAAGAAAGAAAACGAAGGTGAGGTTGAAGAAGTTGATGAGGAGAAGGAGAAAGATGGTAA 898
Query 899 aaagaagaagaaaatcaaagaagTCTCTCACGAGTGGGAGCTCATCAACAAACAGAAACC 958
|||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 899 AAAGAAGAAGAAAATCAAGGAAGTCTCTCACGAGTGGGAACTCATCAACAAGCAGAAACC 958
Query 959 TATTTGGTTGAGGAAGCCAGAAGAGATCACTAAGGAAGAGTATGCTGCTTTCTACAAGAG 1018
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GATCTGGTTGAGGAAGCCAGAAGAGATCACTAAGGAAGAGTATGCTGCTTTCTACAAGAG 1018
Query 1019 CTTGACCAATGACTGGGAAGATCACTTAGCCGTGAAACACTTCTCTGTGGAGGGTCAGCT 1078
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1019 CTTGACCAATGACTGGGAAGATCACTTAGCCGTGAAACACTTCTCAGTGGAGGGTCAGCT 1078
Query 1079 TGAATTCAAGGCCATTCTCTTTGTTCCAAAGAGAGCTCCGTTTGATCTCTTCGACACGAG 1138
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1079 AGAATTCAAGGCCATTCTCTTTGTACCAAAGAGAGCTCCGTTTGATCTCTTTGACACGAG 1138
Query 1139 GAAGAAGCTGAACAACATCAAG-TTGTATGTGAGGAGGGTGTTCATTATGGACAACTGTG 1197
||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct 1139 GAAGAAGTTGAACAACATCAAGCTT-TATGTCAGGAGGGTGTTCATTATGGACAACTGTG 1197
Query 1198 AAGAACTTATCCCAGAGTACCTCAGCTTTGTGAAAGGTGTTGTTGACTCTGATGACTTGC 1257
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 AAGAGCTAATCCCAGAGTACCTCAGCTTTGTGAAAGGTGTTGTTGACTCTGATGACTTGC 1257
Query 1258 CACTCAACATCTCCCGTGAGACGCTTCAACAGAACAAGATCCTTAAGGTGATCAGGAAGA 1317
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CACTCAACATCTCTCGTGAGACGCTTCAACAGAACAAGATCCTTAAGGTGATCAGGAAGA 1317
Query 1318 ATCTAGTGAAGAAGTGTATTGAGATGTTCAACGAGATTGCTGAGAACAAAGAGGACTACA 1377
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ATCTAGTGAAGAAGTGCATTGAGATGTTCAACGAGATTGCTGAGAACAAAGAGGACTACA 1377
Query 1378 CCAAATTTTACGAGGCTTTCTCCAAGAATCTCAAATTGGGTATCCATGAAGACAGTCAGA 1437
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 CCAAATTCTATGAGGCTTTCTCCAAGAATCTCAAATTGGGTATCCATGAAGACAGTCAGA 1437
Query 1438 ACAGGTCAAAGATTGCTGATCTTCTACGGTACCACTCAACAAAGAGCGGTGATGATATGA 1497
||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 1438 ACAGGGGAAAGATTGCTGATCTTCTACGGTACCACTCCACAAAGAGTGGTGATGAAATGA 1497
Query 1498 CGAGCTTGAAAGATTACGTCACAAGGATGAAGGAAGGTCAAAAGGACATTTTCTACATCA 1557
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 CGAGCTTCAAAGATTACGTCACAAGGATGAAGGAAGGTCAAAAGGACATTTTCTACATCA 1557
Query 1558 CTGGTGAAAGCAAAAAGGCTGTTGAGAATTCTCCCTTCTTAGAGAAGCTGAAGAAGAGAG 1617
||||||||||||||||||| || ||||||||||||||||| |||| ||||||||||||||
Sbjct 1558 CTGGTGAAAGCAAAAAGGCGGTGGAGAATTCTCCCTTCTTGGAGAGGCTGAAGAAGAGAG 1617
Query 1618 GCTACGAGGTACTTTACATGGTGGACGCGATTGACGAATACGCTGTTGGACAATTGAAGG 1677
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1618 GATACGAGGTACTTTACATGGTGGATGCGATTGACGAATACGCTGTTGGACAATTGAAGG 1677
Query 1678 AGTATGATGGTAAGAAACTTGTCTCTGCAACCAaagaaggactgaagcttgaagatgaga 1737
||||||| |||||||||||||| ||||| || |||||||| || || |||||||||||||
Sbjct 1678 AGTATGACGGTAAGAAACTTGTTTCTGCGACTAAAGAAGGCCTCAAACTTGAAGATGAGA 1737
Query 1738 ctgaagaagagaagaagaaa-agggaagagaagaaaaaaTCCTTTGAGAATCTCTGTAAG 1796
| |||||||||||||| ||| |||||||||||||| || ||||| |||||||| || |||
Sbjct 1738 CCGAAGAAGAGAAGAA-AAAGAGGGAAGAGAAGAAGAAGTCCTTCGAGAATCTGTGCAAG 1796
Query 1797 ACGATTAAGGAAATTCTTGGGGATAAGGTTGAGAAGGTTGTTGTCTCTGACAGAATCGTG 1856
||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||| || |||
Sbjct 1797 ACGATTAAGGAAATTCTCGGGGACAAGGTTGAGAAGGTTGTGGTCTCAGACAGGATTGTG 1856
Query 1857 GACTCTCCCTGCTGTCTAGTAACTGGTGAATATGGATGGACTGCGAACATGGAAAGGATT 1916
|||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||
Sbjct 1857 GACTCTCCCTGCTGTCTAGTAACTGGTGAATATGGATGGACTGCAAATATGGAGAGGATT 1916
Query 1917 ATGAAGGCACAGGCGCTGAGAGATAGCAGCATGAGTGGCTACATGTCAAGCAAGAAAACA 1976
||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1917 ATGAAGGCACAGGCGTTGAGAGATAGCAGCATGAGTGGTTACATGTCGAGCAAGAAAACA 1976
Query 1977 ATGGAGATCAACCCCGACAATGGTATCATGGAGGAGCTGAGAAAGAGAGCTGAAGCAGAC 2036
|||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct 1977 ATGGAGATCAACCCCGACAACGGTATAATGGAGGAGCTCAGGAAGAGAGCTGAAGCAGAC 2036
Query 2037 AAGAATGACAAGTCTGTTAAAGATCTTGTCATGTTGCTGTTTGAGACGGCTTTGTTGACG 2096
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 2037 AAGAATGACAAGTCTGTTAAAGATCTTGTCATGTTGCTGTATGAGACAGCTTTGTTGACG 2096
Query 2097 TCTGGATTCAGTCTTGATGAACCGAACACGTTTGCTGCTAGGATTCACAGGATGTTGAAG 2156
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2097 TCTGGATTCAGTCTTGATGAACCGAACACTTTTGCTGCTAGGATTCACAGGATGTTGAAG 2156
Query 2157 TTGGGTCTGAGCATTGATGAGGATGAGAATGTTGAGGAAGATGGTGATATGCCTGAGTTG 2216
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2157 TTGGGTCTGAGTATTGATGAGGATGAGAACGTTGAGGAAGATGGTGATATGCCTGAGTTG 2216
Query 2217 GAGGAGGACGCTGCTGAAGAGAGCAAGATGGAGGAAGTCGACTAAGAGATGAAGAAGTTT 2276
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2217 GAGGAGGACGCTGCTGAAGAGAGCAAGATGGAGGAAGTCGACTAAGAGATGAAGAAATTG 2276
Query 2277 ATCTTTATGGTTCTGAAAACTTCTAATATGTCGAGTTATTCTGAGTTTTA 2326
|||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2277 CTCTT-ATGGTTCTGAAAACTTCTAATATGTCGAGTTGTTCTGAGTTTTA 2325
> AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN
81.4 | chr5:22677451-22680152 REVERSE LENGTH=2336
Length=2336
Score = 1509 bits (817), Expect = 0.0
Identities = 1719/2147 (80%), Gaps = 91/2147 (4%)
Strand=Plus/Plus
Query 159 ATGGCTGACGCAGAGACTTTTGCTTTCCAAGCGGAGATTAACCAGCTT-CTTAGCTTGAT 217
||||| ||||||||||| |||||||||||||| ||||| |||||| || ||| | | ||
Sbjct 86 ATGGCGGACGCAGAGACCTTTGCTTTCCAAGCTGAGATCAACCAG-TTGCTTTCCCTCAT 144
Query 218 CATCAACA-CTTTCTACAGCAACAAAGAGATTTTCCTCCGTGAGCTCATCAGTAACTCTT 276
|||||| | |||| ||| |||||| ||||| ||||||||||| |||||||||||||| |
Sbjct 145 CATCAATACCTTT-TACTCCAACAAGGAGATCTTCCTCCGTGAACTCATCAGTAACTCCT 203
Query 277 CTGATGCTCTT-GACAAGATTCGATTTGAGAGCTTGACCGATAAGAGCAAGCTCGATGGA 335
| |||||| || ||||||||| | || ||| |||||| ||||||||||||||||||||
Sbjct 204 CCGATGCT-TTGGACAAGATTAGGTTCGAGTCCTTGACGGATAAGAGCAAGCTCGATGGT 262
Query 336 CAGCCTGAGCTCTTCATTAGAT-TGGTTCCAGATAAGGCTAACAAGACGC-TCTCGATTA 393
||||||||||| |||||| || | |||| || ||| ||||||| || | | | ||||
Sbjct 263 CAGCCTGAGCTTTTCATT-CATATCATTCCGGACAAGACTAACAACAC-CTTGACCATTA 320
Query 394 TCGATAGTGGTATTGGCATGACCAAAGCAGATCTGGTGAACAA-CTTGGGAACCATTGCG 452
|||||||||||||||| |||||||| || ||| |||||||||| ||| ||||| |||||
Sbjct 321 TCGATAGTGGTATTGGGATGACCAAGGCTGATTTGGTGAACAACCTT-GGAACAATTGCA 379
Query 453 AGGTCTGGAACCAAGGAGTTTATGGAAGCACTT--CAAGCTGGAGCTGATGTGAGCATGA 510
|||||||| ||||||||||| ||||| ||| || | |||||||||||||| |||||||
Sbjct 380 AGGTCTGGTACCAAGGAGTTCATGGAGGCA-TTGGC-TGCTGGAGCTGATGTTAGCATGA 437
Query 511 TAGGTCAATTTGGTGTTGGTTTCTACTCTGCTTATCTTG-TTGCAGAGAAGGTTATTGTT 569
| |||||||||||||||||||||||||||||||| |||| |||| || |||||| |||||
Sbjct 438 TTGGTCAATTTGGTGTTGGTTTCTACTCTGCTTA-CTTGGTTGCTGACAAGGTTGTTGTT 496
Query 570 ACTACAAAGCACAATGATGATGAACAATACGTCTGGGAGTCTCAAGCTGGTGGTTCCTTC 629
||||| |||||||| || ||||| || || || ||||||||||| || ||||| || |||
Sbjct 497 ACTACCAAGCACAACGACGATGAGCAGTATGTGTGGGAGTCTCAGGCCGGTGGATCTTTC 556
Query 630 ACTGTTACTAGGGATGTGGATGGGGAACCACTTGGTAGAGGAACTAAGATAA-CATTATT 688
|| || || || || ||| || | |||||||||||||| ||||| | | || |
Sbjct 557 ACGGTGACCAGAGACACCTCTGGTGAGGCTCTTGGTAGAGGAACAAAGATGATCCTT-TA 615
Query 689 CCTCAAGGATGATCAGCTTGAATAC-TTGGAGGAGAGGAGACTCAAAGACTTGGTAAAGA 747
||||||||| || ||| | || ||| ||| ||||| | || || || || ||||| ||||
Sbjct 616 CCTCAAGGAAGACCAGATGGAGTACATTG-AGGAGCGAAGGCTTAAGGATTTGGTGAAGA 674
Query 748 AGCACTCTGAGTTCATCAGTTACCCGATTTATCTGTGGACCGAGAAAACCACTGAGAAGG 807
||||||||||||||||||| ||||| || | ||| |||| ||||| |||| ||||||||
Sbjct 675 AGCACTCTGAGTTCATCAGCTACCCAATCTCTCTCTGGATTGAGAAGACCATTGAGAAGG 734
Query 808 AGATCAGtgatgatgaggatgaagatgaaccaaagaaagaaaatgaaggtgaggttgaag 867
||||| ||||||||| || || || || || ||| || | ||||| ||||||| |
Sbjct 735 AGATCTCTGATGATGAAGAGGAGGAAGAG--AA-GAAGGATGAGGAAGGCAAGGTTGAGG 791
Query 868 aagttgatgaggagaaggagaaag-atg-gtaa-aaagaagaagaaaatcaaagaagTCT 924
|| ||||||||||||| || |||| | | | || ||| |||||||| || || || || |
Sbjct 792 AAATTGATGAGGAGAAAGA-AAAGGAGGAG-AAGAAA-AAGAAGAAGATTAAGGAGGT-T 847
Query 925 -CTCACGAGTGGGAGCTCATCAACAAACAGAAACCTATTTGGTTGAGGAAGCCAGAAGAG 983
|||| |||||||| | | ||||||||||| ||||| ||| ||||||||||||| |||
Sbjct 848 ACTCATGAGTGGGATTTGGTGAACAAACAGAAGCCTATCTGGATGAGGAAGCCAGAGGAG 907
Query 984 ATCA-CTAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACCAATGACTGGGAAGATCA 1042
|||| | ||||| ||||| ||||||||||||||||| |||| |||||| ||||| || ||
Sbjct 908 ATCAAC-AAGGAGGAGTACGCTGCTTTCTACAAGAGTTTGAGCAATGATTGGGAGGAGCA 966
Query 1043 CTTAGCCGTGAAACACTTCTCTGTGGAGGGTCAGCTTGAATTCAAGGCCATTCTCTTTGT 1102
|| || ||||| || |||||||| || || |||||||| ||||| || || ||||||||
Sbjct 967 TTTGGCTGTGAAGCATTTCTCTGTTGAAGGACAGCTTGAGTTCAAAGCTATCCTCTTTGT 1026
Query 1103 TCCAAAGAGAGCTCCGTTT-GATCTCTTCGACACGAGGAAGAAGCTGAACAACATCAAGT 1161
||| ||||||||||| ||| |||||||| ||||| | |||||||| ||||||||||||
Sbjct 1027 TCCCAAGAGAGCTCC-TTTCGATCTCTTTGACACTAAGAAGAAGCCCAACAACATCAAGC 1085
Query 1162 TGTATGTGAGGAGGGTGTTCATTATGGACAACTGTGAAGAACTT-ATCCCAGAGTACCTC 1220
| ||||| | | || ||||| ||||||||||||||||| | | ||||| || |||||
Sbjct 1086 TCTATGTCCGTCGTGTCTTCATCATGGACAACTGTGAAGA-CATCATCCCTGATTACCTT 1144
Query 1221 AGCTTTGTGAAAGGTGTTGTTGACTCTGATGA-CTTGCCACTCAACATCTCCCGTGAGAC 1279
| ||||| || ||| | ||||||||||| || ||| || ||||||||||| | || ||
Sbjct 1145 GGGTTTGTCAAGGGTATCGTTGACTCTGAAGATCTT-CCTCTCAACATCTCAAGAGAAAC 1203
Query 1280 GCTT-CAACAGAACAAGATCCTTAAGGTGATCAGGAAGAATCTAGTGAAGAAGTGTATTG 1338
|| || |||||||||||||| ||||| ||| | ||||| || |||||||||||| |||
Sbjct 1204 A-TTGCAGCAGAACAAGATCCTCAAGGTCATCCGCAAGAACCTTGTGAAGAAGTGTCTTG 1262
Query 1339 AGATGTTCAACGAGATTGCTGAGAACAAAGAGGACTACACCAAATTTTACGAGGCTTTCT 1398
|| | ||| |||||||| |||||||| |||||||||| ||| || || ||||||||||
Sbjct 1263 AGCTCTTCTTTGAGATTGCCGAGAACAAGGAGGACTACAACAAGTTCTATGAGGCTTTCT 1322
Query 1399 CCAAGAATCTCAAATTGGGTATCCATGAAGACAGTCAGAACAGGTCAAAGATTGCTGATC 1458
| || || || || | || ||||| || ||| || ||||| | |||||||||||
Sbjct 1323 CTAAAAACCTGAAGCTCGGCATCCACGAGGACTCCCAAAACAGAACCAAGATTGCTGAG- 1381
Query 1459 TT-CTACGGTACCACTCAACAAAGAGCGGTGATGATAT-GACGAG-CTTGAAAGATTACG 1515
|| || || ||||||||||| |||||||||||||| || ||| || || || || ||||
Sbjct 1382 TTGCTCCGTTACCACTCAACCAAGAGCGGTGATGA-ATTGACCAGTCTC-AAGGACTACG 1439
Query 1516 TCACAAGGATGAAGGAAGGTCAAAAGGACATTTTCTACATCACTGGTGAAAGCAAAAAGG 1575
| |||||||||||||||||||| || || || ||||||||||| ||||| ||||||||||
Sbjct 1440 TGACAAGGATGAAGGAAGGTCAGAACGAGATCTTCTACATCACCGGTGAGAGCAAAAAGG 1499
Query 1576 CTGTTGAGAATTCTCCCTTCTTAGAGAAGCTGAAGAAGAGAGGCT-ACGAGGTACTTTAC 1634
| || ||||| ||||||||| |||||||||| ||||||| ||| | |||| || || |||
Sbjct 1500 CCGTGGAGAACTCTCCCTTCCTAGAGAAGCTCAAGAAGA-AGGGTTACGAAGTCCTCTAC 1558
Query 1635 ATGGTGGACGCGATTGACGAATACGCTGTTGGACAATTGAAGGAGTAT-GATGGTAAGAA 1693
||||| ||||| ||||| || || ||| |||| || | ||||| | | || || |||||
Sbjct 1559 ATGGTTGACGCTATTGATGAGTATGCTATTGGTCAGCTCAAGGAAT-TCGAGGGAAAGAA 1617
Query 1694 ACTTGTCTCTGCAACCAaagaaggactgaagcttgaagatgagactgaagaagagaagaa 1753
||||||||||||||||| ||||| |||||||| ||||| || |||| || ||||||||
Sbjct 1618 GCTTGTCTCTGCAACCAAGGAAGGTCTGAAGCTGGAAGA-GA--CTGATGACGAGAAGAA 1674
Query 1754 gaa-aagggaagag---aagaaaaaaTCCTTTGAGA-ATCTCTGTAA-GACGATTAAGGA 1807
||| || | ||||| ||| | || | || ||| | ||||| || | |||||||||
Sbjct 1675 GAAGAAAG-AAGAGCTCAAGGAGAAGT--TT-GAGGGA-CTCTGCAAAGT-GATTAAGGA 1728
Query 1808 AATTCTTGGG-GATAAGGTTGAGAAGGTTGTTGTCTCTGACAGAATCGTGGACTCTCCCT 1866
|| ||||| || ||||| ||||||||| | ||||||||| | | |||||||| || |
Sbjct 1729 CGTT-TTGGGAGACAAGGTCGAGAAGGTTATCGTCTCTGACCGTGTGGTGGACTCACCTT 1787
Query 1867 GCTGTCTAGTAACTGGTGAATATGGATGGACTGCGAACATGGAAAGGATTATGAAGGCAC 1926
||||||||||||| || || ||||| |||||||| |||||||| ||||| ||||| || |
Sbjct 1788 GCTGTCTAGTAACAGGCGAGTATGGCTGGACTGCAAACATGGAGAGGATCATGAAAGCTC 1847
Query 1927 AGGCGCTGAGAG-ATAGCAGCATGAGTGGCTACATGTCAAGCAAGAAAACAATGGAGATC 1985
| || ||| || |||||| || | |||| ||||||||||||||||| |||||||| ||
Sbjct 1848 AAGCTTTGA-AGGATAGCAACACGGGTGGTTACATGTCAAGCAAGAAGACAATGGAAATT 1906
Query 1986 AACCCCGACAA-TGGTATCATGGAGGAGCTGAGAAAGAGAGCTGAAGCAGACAAGAATGA 2044
||||| || || | | |||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1907 AACCCAGAGAACTCG-ATCATGGATGAGCTGAGAAAGAGAGCTGAAGCGGACAAGAACGA 1965
Query 2045 CAAGTCTGTTAAAGATCTTGT-CATGTTGCTGTTTGAGACGGCT-TTGTTGACGTCTGGA 2102
|||||||| || |||||||| | | || || |||||||| ||| || | || |||||
Sbjct 1966 TAAGTCTGTGAAGGATCTTGTGCTTCTT-CTCTTTGAGACCGCTCTTCTC-ACCTCTGGT 2023
Query 2103 TTCAGTCTTGATGAACCGAACACGTTTGCT-GCTAGGATTCACAGGATGTTGAAG-TTGG 2160
||||| |||||||| || ||||| |||| || || || ||||||||||||||| ||||
Sbjct 2024 TTCAGCCTTGATGAGCCCAACACTTTTGGAAGC-AGAATCCACAGGATGTTGAAGCTTGG 2082
Query 2161 GTCTGAGCATTGATGAGGATGA-GAATGTTGAGGAAGATGGTGATATGCCTGAG-TTGGA 2218
| |||||||||| |||||||| | ||||| | |||| ||| |||||| | ||| |
Sbjct 2083 AT-TGAGCATTGAAGAGGATGATGCC-GTTGAAGCTGATGCTGAGATGCCTCCGCTTGAA 2140
Query 2219 GGAGGACGCTG---CTGAAGAG-AGCAAGATGGAGGAAGTCGACTAA 2261
| | || |||| |||||| | ||||||||||||||||||||||||
Sbjct 2141 G-ATGATGCTGATGCTGAAG-GTAGCAAGATGGAGGAAGTCGACTAA 2185
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116264462220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5