BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495426 Length=893 Score E Sequences producing significant alignments: (Bits) Value AT5G53490.3 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1118 0.0 > AT5G53490.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:21723307-21724642 REVERSE LENGTH=955 Length=955 Score = 1118 bits (605), Expect = 0.0 Identities = 731/792 (92%), Gaps = 8/792 (1%) Strand=Plus/Plus Query 105 ATGTTCTCCGCTGGAGAAAACAGAGAAAATGGTGAAGGTACCAAGAAGAGTTTGTTGCCG 164 |||||||| || ||||||||||||||||||||||||||| ||||||||| | || || Sbjct 160 ATGTTCTCAGCAGGAGAAAACAGAGAAAATGGTGAAGGTGTAAAGAAGAGTCTCTTTCCT 219 Query 165 ATAAAGGAGCTTGGAAGTATCGCTTGCGCTGCTCTTTGTGCTTGCACTCTTATTATGGCT 224 | |||||||||||| |||||||||||| ||||| |||||||||||||||| || ||| Sbjct 220 CTTAAGGAGCTTGGATCTATCGCTTGCGCAGCTCTCTGTGCTTGCACTCTTACAATAGCT 279 Query 225 TCTCCTGTAATTGCTGCTAACCAGAGACTTCCTCCACTATCAACAGAACCAGACCGGTGT 284 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 280 TCTCCTGTTATTGCTGCTAACCAGAGACTTCCTCCGTTATCAACAGAACCAGACCGGTGT 339 Query 285 GAAAAAGCATTCGTTGGTAACACGATAGGTCAAGCAAATGGGGTTTATGACAAACCGCTA 344 ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| || Sbjct 340 GAAAAAGCATTTGTTGGTAACACGATAGGTCAAGCAAATGGTGTCTATGACAAACCACTG 399 Query 345 GATCTTAGGTTCTGTGATTACACAAACGATCAGACTAATCTCAAAGGCAAGACTCTCTCT 404 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 400 GATCTTAGGTTCTGTGATTACACAAATGATCAAACTAATCTCAAAGGCAAGACTCTCTCT 459 Query 405 GCAGCCTTGATGGTAGGAGCTAAGTTTGATGGTGCAGATATGACTGAAGTTGTTATGTCA 464 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 460 GCAGCCTTGATGGTTGGGGCTAAGTTTGATGGTGCAGATATGACTGAAGTTGTTATGTCA 519 Query 465 AAAGCTTATGCCGTTGAAGCAAGCTTTAAGGGGGTGAATTTCACGAATGCTGTTATCGAT 524 ||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 520 AAAGCTTATGCTGTAGAAGCAAGCTTTAAAGGGGTGAATTTCACTAATGCTGTTATCGAT 579 Query 525 CGGGTGAATTTTGGGAAATCGAATTTGAAAGGTGCGGTGTTCCGGAACACGGTGTTATCC 584 ||||||||||| |||||||||||| |||||||||||||||| |||||||||| |||||| Sbjct 580 CGGGTGAATTTCGGGAAATCGAATCTGAAAGGTGCGGTGTTTAGGAACACGGTATTATCC 639 Query 585 GGTTCGACATTCGAGGAGGCAAATTTGGAGGATGTGGTCTTTGAGGACACTATCATTGGT 644 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 640 GGTTCGACATTTGAGGAGGCAAATTTGGAGGATGTGGTCTTTGAGGACACTATCATTGGT 699 Query 645 TACATAGACCTTCAGAAAATATGTAGGAACGAGTCGATAAACGAAGAAGGAAGACTTGTG 704 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 700 TACATAGACCTTCAGAAAATATGTAGGAATGAGTCCATAAACGAAGAAGGAAGACTTGTG 759 Query 705 TTGGGTTGCCGATAGAGAAGAGAGAAAGATTTGATTTGAATGTATTATATATGTAAGATT 764 ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 760 TTGGGATGCCGATAGAGAAGAGAGAAGGTTTTGATTTGAATGTATTATATATGTAAGATT 819 Query 765 TGAGATTTG---ACACAAAGATGTATGAAACAAAGTAAGTAAAGGTTCAAGGATAGGAGT 821 | ||||||| ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 820 TAAGATTTGTTGACACAAAGATGTATGAAAC----TAAGTAAAGGTTGAAGGATAGGAGT 875 Query 822 CGAGAGAGTTATGAGCGGTTGTGTAATCAAATTCTTGTAAATTCTGTAGCCAAACAAAAG 881 | ||||||||||||| |||||| ||||| | ||||||||||||||||| ||||||||||| Sbjct 876 CAAGAGAGTTATGAGAGGTTGTATAATCGA-TTCTTGTAAATTCTGTAACCAAACAAAAG 934 Query 882 GCATTTTCTCTG 893 || ||||||||| Sbjct 935 GCGTTTTCTCTG 946 Score = 148 bits (80), Expect = 7e-35 Identities = 97/105 (92%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 1 ACACTCCCATGGCTTCGCTTCCTGTTCAATTCACGAGGAATCATTTCTCTTCACCGTTTT 60 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 14 ACACTTCCATGGCTTCGCTTCCTGTTCAATTCACGAGGAATCAAATCTCTTCACCGTTTT 73 Query 61 TCTCCGTTAAAC-TCCGCCATGAGCCGAGATCTTTAGTAACAGTA 104 |||| || |||| |||||| |||||| |||||||||||||||||| Sbjct 74 TCTCTGT-AAACCTCCGCCGTGAGCCTAGATCTTTAGTAACAGTA 117 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43603239596 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5