BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495434 Length=1259 Score E Sequences producing significant alignments: (Bits) Value AT5G53580.1 | Symbols: | NAD(P)-linked oxidoreductase superfam... 1877 0.0 > AT5G53580.1 | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr5:21765054-21767000 REVERSE LENGTH=1340 Length=1340 Score = 1877 bits (1016), Expect = 0.0 Identities = 1199/1283 (93%), Gaps = 30/1283 (2%) Strand=Plus/Plus Query 1 TTTATCTCCAAAAACATCCACACACTGAGAAACAGCAGAAGAAAGGCTAGAGAGCCTTC- 59 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7 TTTATCTTCAAAAACATCCACACACTGAGAAACAGCAGAAGAAAGGCTTGAGAGCCTTCT 66 Query 60 T-T---C-----TCAATGGCTTTAACATTGTCAACCACAAAGACTTTCACTAATATAAAC 110 | | | |||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 67 TCTCCACTATTTTCAATGGCTTTAACATTGTCAACCACAAAGACCTTCACTAACATAAAC 126 Query 111 TGCT----C---A-----AACATAACCACCTTTAAGCCTCTCAAGCTTCCTCTTTTCTGG 158 |||| | | |||||||||||||||||||||||||||||||||||||||||| Sbjct 127 TGCTCAAACAATACTTCCAACATAACCACCTTTAAGCCTCTCAAGCTTCCTCTTTTCTGG 186 Query 159 CCATGGCAAAAGGTCAAAATGGGTCCTTTGAGTGTTTCTCCAATGGGTTTTGGGACATGG 218 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 187 CCATGGCAAAAGGTCAAAATGGGTCCTTTAAGTGTTTCTCCTATGGGTTTTGGGACATGG 246 Query 219 GCTTGGGGCAATCAGCTTCTTTGGGGTTATCAGACTTCCATGGATGATCAGCTTCAAGAA 278 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 247 GCTTGGGGTAATCAGCTTCTTTGGGGTTATCAGACTTCCATGGATGATCAGCTTCAACAA 306 Query 279 GCTTTTAAATTGGCTTTGGAAAATGGAATCAATTTGTTTGATACTGCTGATTCTTATGGC 338 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 307 GCTTTTGAATTGGCTTTGGAAAATGGAATCAATTTGTTTGATACTGCTGATTCTTATGGC 366 Query 339 ACTGGTAGGCTTAATGGTCAAAGTGAGAGACTTTTGGGGAAATTCATTAAAGAATCTCAA 398 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 367 ACTGGTAGGCTTAATGGCCAAAGTGAGAGACTTTTGGGGAAATTCATTAAAGAATCTCAA 426 Query 399 GTG-CTAAAAGGGAAACAAAATGAAGTAGTGGTAGCTACAAAGTTTGCAGCTTATCCATG 457 | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 G-GACTTAAAGGGAAACAAAATGAAGTAGTGGTAGCTACAAAGTTTGCAGCTTATCCATG 485 Query 458 GAGGTTAACCTCTGGACAGTTTGTGAATGCCTGCAGAGCTTCTTTAGACCGACTTCAGAT 517 ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 486 GAGGTTAACTTCAGGACAGTTTGTGAATGCCTGCAGAGCTTCTTTAGACCGGCTTCAGAT 545 Query 518 AGACCAGCTCGGGATCGGACAGCTTCACTGGTCGACTGCAAACTACGCGCCTCTACAAGA 577 ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 546 AGACCAGCTCGGGATTGGACAGCTTCACTGGTCAACTGCAAGCTACGCGCCTCTACAAGA 605 Query 578 GCTTGTTCTTTGGGATGGTCTAGCGCAAATGTATGAAAAGGGCCTAGTTCGAGCGGTTGG 637 ||||||||||||||||||||||| ||||||||| |||||||| ||||| |||| ||||| Sbjct 606 GCTTGTTCTTTGGGATGGTCTAGTGCAAATGTACGAAAAGGGTTTAGTTAGAGCCGTTGG 665 Query 638 AGTCAGTAACTATGGACCTCAACAGCTTGTGAAGATTCATGATTACCTTAAAACTCGAGG 697 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 666 AGTTAGTAACTATGGACCTCAACAGCTTGTGAAGATTCATGATTACCTTAAAACTCGAGG 725 Query 698 GGTTCCTTTATGCTCTGCTCAAGTGCAGTTCTCATTGCTAAGCATGGGGAAAGAGCAACT 757 |||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct 726 GGTTCCTTTATGTTCTGCCCAAGTGCAATTCTCATTGCTAAGCATGGGAAAAGAGCAACT 785 Query 758 AGAGATCAAGAGTATATGTGACGAGCTCGGGATTTGTTTAATCTCTTATAGTCCTCTTGG 817 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct 786 AGAGATCAAGAGTATATGCGACGAGCTCGGGATTCGTTTAATCTCTTATAGTCCTCTTGG 845 Query 818 TCTAGGAATGCTAACTGGGAAATACTCCTCTTCAAAACTTCCCACTGGTCCTCGATCATT 877 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 846 GCTAGGAATGCTAACTGGGAAATACTCCTCTTCAAAACTTCCCACTGGTCCACGATCATT 905 Query 878 GCTGTTTCGACAAATTCTACCTGGATTAGAGCCTCTGCTTCTAGCACTGAGTAAGATTGC 937 |||||| ||||||||||| ||||||||||| ||||| ||| |||||||||| ||||||| Sbjct 906 GCTGTTCCGACAAATTCTTCCTGGATTAGAACCTCTTCTTTTAGCACTGAGCGAGATTGC 965 Query 938 AAAGAAACGAGGAAAGACTATGCCTCAGGTCGCAATAAACTGGTGTATATGCAAAGGGAC 997 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 966 AAAGAAACGAGGAAAGACTATGCCTCAGGTTGCAATAAACTGGTGCATATGCAAAGGGAC 1025 Query 998 AGTACCGATACCCGGTATCAAGTCGGTAAAACATGTAGAGGATAATTTAGGTGCTCTGGG 1057 |||||||||||| || ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct 1026 AGTACCGATACCGGGAATCAAGTCGGTAAGACATGTTGAAGATAATTTGGGTGCTCTGGG 1085 Query 1058 ATGGAAACTTACAAATGATGAACAGCTGCAGTTAGAATATGCAGCAAAAGAATCACCGAA 1117 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || Sbjct 1086 ATGGAAACTTACAAATGATGAACAGCTTCAGTTAGAATATGCAGCTAAAGAATCACCAAA 1145 Query 1118 GTCGATGATTCAGAACATTTTTCAAACAAGATGATATGATAAGAGAAGATGCTTATACA- 1176 ||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1146 GTCAATGATTCAGAATATTTTTCAGACAAGATGATAGGATAAGAGAAGATGCTTATACAC 1205 Query 1177 -TCTAGACCACAAAATGAGAACAATGTGTATAAGTAGAAGTGTTTAATCTACTTCTATAT 1235 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | | Sbjct 1206 ATCTAGACCACAAA-TGAGAACAATGTGTATAAGTAGAAGT-TTTAATCTACTTCT-T-T 1261 Query 1236 ATATATGCACATATTGTGAAGAA 1258 ||||||||||||||||||||||| Sbjct 1262 ATATATGCACATATTGTGAAGAA 1284 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61897271985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5