BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495493 Length=1754 Score E Sequences producing significant alignments: (Bits) Value AT5G54130.2 | Symbols: | Calcium-binding endonuclease/exonucle... 2540 0.0 > AT5G54130.2 | Symbols: | Calcium-binding endonuclease/exonuclease/phosphatase family | chr5:21962600-21965604 FORWARD LENGTH=1936 Length=1936 Score = 2540 bits (1375), Expect = 0.0 Identities = 1610/1716 (94%), Gaps = 45/1716 (3%) Strand=Plus/Plus Query 78 TTAGTTTCTAATTTTGGGTTTAATTTTTGTTTC-GGTTT-AAAGAATTCGAAAGAGCGGT 135 |||||||||||||||||| |||| ||| ||||| || |||||||||||||||| Sbjct 118 TTAGTTTCTAATTTTGGG-TTAA-AAGAAATTCGGGTTTCAATTAATTCGAAAGAGCGGT 175 Query 136 CACGACGTTTCATAGAGAATCGTCATCTTCTTCTTCTTCG-G----TTTTGTTCTCTCCt 190 ||||||||||| |||||||||||| ||||| ||||||||| | ||||||| |||||| Sbjct 176 CACGACGTTTCTTAGAGAATCGTCTTCTTCATCTTCTTCGTGAACTTTTTGTTTTCTCCT 235 Query 191 ttttttGATTTTCACCGCC-G-GA-----G-A-TTTT----TTATTCGCCGGCGGTTTAG 237 ||||||||||||||||||| | || | | |||| ||||||||||||||||||| Sbjct 236 TTTTTTGATTTTCACCGCCGGAGATTTTTGTATTTTTCCGATTATTCGCCGGCGGTTTAG 295 Query 238 AGATAATGAAGGGGAGGATATCAAAAATAGGAAGCTATGCAATCTCATCTTCCATTAGAG 297 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 296 AGATAATGAAGGGGAGGATATCAAAAATAGGAAGCTATGCAATCTCGTCTTCCATTAGAG 355 Query 298 ATCAACATCAGCAGCAACCTTGTATTTCTTGTACTACTTTCAATATCCTTGCTCCGATCT 357 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 ATCAGCAT---CAGCAACCTTGTATTTCTTGTACTACTTTCAATATCCTTGCTCCGATCT 412 Query 358 ATAAACGTCTCTCTCACAAGGATCAAAGTCTTCGTGAAAGCGATAATCGAGCGTATTGGC 417 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 413 ATAAACGTCTCTCTCACAAGGATCAAAGTCTTCGTGAAAGTGATAATCGAGCGTATTGGC 472 Query 418 TTGGAAGGAATCATAGAATCCTTGATTGGTTATTGTATGAGAGATCTTCAATCATATGTT 477 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 473 TTGGAAGGAATCATCGAATCATTGATTGGTTATTGTATGAGAGATCTTCAATCATATGTT 532 Query 478 TACAGGAGTTTTGGGTAGGCAATGAAGAGCTTGTTAATTTATATGAGAAGAGACTTGGTG 537 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||| | Sbjct 533 TACAGGAGTTTTGGGTAGGCAATGAAGAGCTTGTTAATTTGTACGAGAAGAGACTTGGAG 592 Query 538 ACGCTGGTTATTTAAGTTACAAGCTTGGTCGTACTAATAATCGTGGTGATGGTCTGCTTA 597 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 593 ACGCTGGTTATCTAAGTTACAAGCTTGGTCGTACTAATAATCGTGGTGATGGTTTGCTTA 652 Query 598 CGGCTGTTCATAAGGACTATTTTAGAGTTGTGAACTCGAGGGATTTGCTTTTTAACGATT 657 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 653 CGGCTGTTCATAAGGACTATTTTAGAGTTGTGAACTCGAGGGATTTGCTTTTTAATGATT 712 Query 658 GTGGTGATCGAGTCGCGCAGTTGCTACATGTAGAATTAGTTCCTCCTTACTCTCAGTTTG 717 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 713 GTGGTGATCGAGTTGCTCAGTTGCTACATGTAGAATTAGTTCCTCCTTACTCTCAGTATG 772 Query 718 ATGCTCATCAAGAAGTTTTGATTGTGAATACTCATTTGTTGTTTCCTCATGATTCAACAC 777 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 ATGCTCATCAAGAAGTTTTGATTGTGAATACTCATTTGTTGTTTCCTCATGATTCAACAT 832 Query 778 TGTCTATAGTAAGATTGCAGCAGGTGTATAAGATTCTTCAGTATGTAGAATCTTATCAGA 837 |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 833 TGTCCATAGTAAGATTGCAGCAGGTATATAAGATTCTTCAGTATGTAGAATCTTACCAGA 892 Query 838 AGGAAGTTAATCTAAGTCCTATGCCTATTATTCTTTGCGGAGATTGGAACGGAAGTAAGC 897 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 893 AGGAAGTTAATCTCAGTCCCATGCCTATTATTCTTTGCGGAGATTGGAACGGAAGTAAGC 952 Query 898 GAGGGCATGTCTACAAGTTTCTCAGGTCACAGGGTTTTGTGTCATCTTACGACACTGCTC 957 |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 953 GAGGACATGTCTACAAGTTTCTCAGGTCACAGGGTTTTGTGTCGTCTTACGATACTGCTC 1012 Query 958 ATCGGTACACAGATTCAGATGCTCACAAGTGGGTAAGCCACCGGAATCATCGGGGTAACA 1017 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 ATCGGTACACAGACTCAGATGCTCACAAGTGGGTAAGCCACCGGAATCATCGGGGTAACA 1072 Query 1018 TATGCGCTGTCGATTTCATATGGCTTTTAAATCCAAATCGGTATAGAAAGCTGCTAAAAA 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 TATGCGCTGTCGATTTCATATGGCTTTTAAATCCAAATCGGTATAGAAAGCTGCTAAAAA 1132 Query 1078 CAAGTTGGAGCGAGGCAGTGTTTGGCATGTTCAGGTATCTACTAAGAAGAGCTTCACTAA 1137 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 1133 CAAGTTGGAGCGAGGCAGTCTTTGGCATGTTCAGGTATCTACTGAGAAGAGCTTCACTAA 1192 Query 1138 CAGCTGAAGATGCTTTTGCTTTTCTGAAAACTGACAATGATGGTGACTACATTACATTCA 1197 ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1193 CAGCTGAAGATGCTTTTGCTTTTCTAAAAACTGACAATGATGGTGACCACATTACATTCA 1252 Query 1198 TGGGCTTCTGTGAGACTCTTCGGCAGCTCAATCTAACAGGTCATTGCAATGGACTAACAA 1257 ||||||||||||||||||||||||||||||||||||||||||| || |||||||| || | Sbjct 1253 TGGGCTTCTGTGAGACTCTTCGGCAGCTCAATCTAACAGGTCACTGTAATGGACTCACGA 1312 Query 1258 CAAAAGAGATCAAAGATTTGTGGATTCAAGCAGACATTGATGGAAACGGTCTTCTAGATT 1317 |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 1313 CAAAAGAGATCAAAGATTTGTGGACTCAAGCTGACATTGATGGAAACGGTCTTCTAGATT 1372 Query 1318 ACAAGGAGTTTCAGCAAAGAATATGGAACCAAACCTGGTCAGAACAAAGAGATGCAGAGG 1377 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 ATAAGGAGTTTCAGCAAAGAATATGGAACCAAACCTGGTCAGAACAAAGAGATGCAGAGG 1432 Query 1378 ACGGAGAAGCAAAAGGTAACCAAGAACAAACCGTTGGATTCAGTGTCAAGAACGCGGTTC 1437 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1433 ACGGAGAAGCAAAAGGTAACCAAGAACAAACCGTTGGATTCAGTGTCAAAAACGCAGTTT 1492 Query 1438 TGTTTCCTCCCGAAGTTGAAAAAGGAATGTGGCCAGAAAATTACTCTCTATCAGATCACG 1497 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1493 TGTTTCCTCCTGAAGTTGAAAAAGGAATGTGGCCAGAAAATTACTCTCTATCAGATCACG 1552 Query 1498 CGAGACTCACCGTTGTATTCTCACCCATAAGAATGCCTTGCTCTCAATTGGTTTCATGAC 1557 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1553 CGAGACTCACTGTTGTATTCTCACCCATAAGAATGCCTTGCTCTCAATTGGTTTCATGAC 1612 Query 1558 AAAA-ACACTGACCAAACAAACTTTAGCTTCTTCCATTTA-AAGAGACCTCTGAGTTTTG 1615 |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1613 AAAACACACTCACCAAACAAACTTTAGCTTCTTCCATTTTTAAGAGACCTCTGAGTTTTG 1672 Query 1616 GTGTCCCCTTACAGAGAA--T-C-C-----------ATTGGATCGGCTTGAATGATCTCA 1660 |||||||||||||||||| | | | ||||||||||||||| | ||||| Sbjct 1673 GTGTCCCCTTACAGAGAAACTTCGCTCTGTCTCTCCATTGGATCGGCTTGACCGCTCTCA 1732 Query 1661 CTTTGCGGTTACTGCGTTgggggggAAGAAGAGAGAAAGAGG-AC-TGAGGTCTATAAAT 1718 | |||||||| |||||||||| ||||||||||||||||| || || | |||||||||||| Sbjct 1733 CGTTGCGGTTCCTGCGTTGGGTGGGAAGAAGAGAGAAAGGGGGACAT-AGGTCTATAAAT 1791 Query 1719 TTTTACTGTGTACAAAAACATGTAAACTAAATATAT 1754 |||||||||||||||||||||||||||||||||||| Sbjct 1792 TTTTACTGTGTACAAAAACATGTAAACTAAATATAT 1827 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 86746541760 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5