BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495528 Length=846 Score E Sequences producing significant alignments: (Bits) Value AT5G54470.1 | Symbols: | B-box type zinc finger family protein... 1009 0.0 > AT5G54470.1 | Symbols: | B-box type zinc finger family protein | chr5:22114304-22115472 REVERSE LENGTH=1085 Length=1085 Score = 1009 bits (546), Expect = 0.0 Identities = 785/891 (88%), Gaps = 53/891 (6%) Strand=Plus/Plus Query 1 ATTTCGCTGTCTCTTATTTGTGTCCGCAGAAGAAACgagagaagagagagagaAGC-AAA 59 ||| |||||||||||||| |||||||||||||||||||||| | |||||||||||| ||| Sbjct 1 ATTACGCTGTCTCTTATTCGTGTCCGCAGAAGAAACGAGAG-A-AGAGAGAGAAGCAAAA 58 Query 60 GTCCTTACCAAGAATATTTAT-A-ACACAAACATC--gag--agag--ag----agagag 107 | ||||||||||||||||||| | ||||||||||| ||| |||| || |||||| Sbjct 59 GACCTTACCAAGAATATTTATAACACACAAACATCTAGAGACAGAGATAGACATAGAGAG 118 Query 108 agag--agagGTTGTGGTTGTG-GAGATAAGATC---A-ATGGGGAAGAAGAAGTGCGAG 160 |||| | ||||||||||||| ||||||| ||| | ||||||||||||||||||||| Sbjct 119 AGAGCTTGTGGTTGTGGTTGTGCGAGATAATATCTAGAGATGGGGAAGAAGAAGTGCGAG 178 Query 161 TTATGTTGTGGAGTAGCGAGAATGTATTGTGAGTCAGATCAAGCGAGTTTATGTTGGGAT 220 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 TTATGTTGTGGTGTAGCGAGAATGTATTGTGAGTCAGATCAAGCGAGTTTATGTTGGGAT 238 Query 221 TGTGACGGTAAAGTTCACGGAGCTAATTTTCTGGTGGCGAAACACACGCGTTGTCTTCTT 280 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 239 TGTGACGGTAAAGTTCACGGAGCTAATTTTCTGGTGGCGAAACACATGCGTTGTCTTCTA 298 Query 281 TGTAGCGCGTGTCAGTCACACACGTCTTGGAAAGCTTCTGGCCTTCGTCTTGGCCCAACT 340 |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct 299 TGTAGCGCGTGTCAGTCACACACGCCTTGGAAAGCTTCTGGGCTGAATCTTGGCCCAACT 358 Query 341 GTTTCTATCTGTGACTCTTGTTTAGCTCGTAAGAAGAAT---AACAGCTCCGTCACC-GG 396 |||||||||||||| |||||||||||||||||||||||| ||||||||| || || || Sbjct 359 GTTTCTATCTGTGAGTCTTGTTTAGCTCGTAAGAAGAATAACAACAGCTCCCTCGCCGGG 418 Query 397 AAGGAGTCAGAATCTGAACC---AAGAAGAGATCATTAGTAGAGAA-GATGATGATGCTG 452 | ||| ||||||||| |||| |||||||||||||| || | || || | || |||| Sbjct 419 AGGGA-TCAGAATCTTAACCAAGAAGAAGAGATCATTGGTTG-TAACGACG--GA-GCTG 473 Query 453 AATCTTATGATGAGGAAAGC------GAT---G-AG--GAAGAAGTGGAGAATCAGGTTG 500 | |||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct 474 AGTCTTATGATGAGGAAAGCGATGAGGATGAAGAAGAAGAAGAAGTGGAGAATCAGGTTG 533 Query 501 TGCCGGCGGCGGTAGCGGAAGAACTTCCGGTGGTGAGTTCGTCGTCTTCGGTTAGTAACG 560 | ||||| ||||| | | ||||||||||||||||||||||||||||||||||||||| | Sbjct 534 TTCCGGCTGCGGTGGAGCAAGAACTTCCGGTGGTGAGTTCGTCGTCTTCGGTTAGTAGTG 593 Query 561 GCGACGGAGATGTGGTGGTGAAAAGGACGAGACTTGATTTGGATCTTAACCTCTCCGATG 620 | || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 594 GTGAAGGAGATCAGGTGGTGAAAAGGACGAGACTTGATTTGGATCTTAACCTCTCCGATG 653 Query 621 AGGAGAACGAATCTCGACCGTTGAAAAGATTATCGAGAGACGAAGCTTTGTCAAAATCAA 680 |||||||| ||||| |||| ||||||||||||||||||||||||| |||||||| ||||| Sbjct 654 AGGAGAACCAATCTAGACCATTGAAAAGATTATCGAGAGACGAAGGTTTGTCAAGATCAA 713 Query 681 CGGTTGTGATGAA---CTCAATTGAGAAAGTACACGGAGGGAGGAGAAAATCAGAGGGAT 737 | ||||||||||| |||||| | |||| |||||||||||||||||||| ||||||||| Sbjct 714 CTGTTGTGATGAATAGCTCAATCGTGAAATTACACGGAGGGAGGAGAAAAGCAGAGGGAT 773 Query 738 GTGATACATCATCATCGTCTTCATTTTATTGAAATCGCCAACAAAAGTAGAGATTTTTAG 797 ||||||||||||| |||||||| |||||||||||||||||| |||||||||||| | || Sbjct 774 GTGATACATCATCGTCGTCTTCGTTTTATTGAAATCGCCAAGGAAAGTAGAGATTGT-AG 832 Query 798 CCGTTGATGATTCTTTCGTT-GGTTGAT-AGATTAATTCTCACCGTTCATT 846 |||||||||||||||| ||| ||||||| |||||||| |||| |||||||| Sbjct 833 CCGTTGATGATTCTTTTGTTTGGTTGATTAGATTAATCCTCATCGTTCATT 883 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41242234687 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5