BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495612 Length=1171 Score E Sequences producing significant alignments: (Bits) Value AT5G55260.1 | Symbols: PPX2, PPX-2 | protein phosphatase X 2 | ... 1716 0.0 AT4G26720.1 | Symbols: PPX1, PPX-1 | protein phosphatase X 1 | ... 1013 0.0 > AT5G55260.1 | Symbols: PPX2, PPX-2 | protein phosphatase X 2 | chr5:22416599-22418864 FORWARD LENGTH=1370 Length=1370 Score = 1716 bits (929), Expect = 0.0 Identities = 1053/1110 (95%), Gaps = 19/1110 (2%) Strand=Plus/Plus Query 69 CTTCGTGAATTTTGCGTCTGATTATCGAAATTAGGGTTTTTATT-TTCTTTCCATTAGTT 127 |||||| ||||||||||||||||||| |||||| ||||||| || || |||||||||||| Sbjct 116 CTTCGTAAATTTTGCGTCTGATTATC-AAATTA-GGTTTTTTTTGTTGTTTCCATTAGTT 173 Query 128 GTCTGTGA-AGAAAGGTGGAAGAAGaaa--aa-a-aaGAAAATGTCAGACATAGACCAGC 182 ||| | | | || |||| ||||| || | | ||||||||||||| ||||| ||| Sbjct 174 GTC--TCATTG-TCTGT-GAAG-AGAAAGGAACAGAGGAAAATGTCAGACCTAGACAAGC 228 Query 183 AAATAGAGCAGCTAAAACGCTGCGAGCCTTTGAAGGAATCAGAAGTGAAAGCTCTTTGTC 242 ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 229 AAATAGAGCAGCTTAAACGCTGCGAGGCTTTGAAGGAATCAGAAGTGAAGGCTCTTTGTC 288 Query 243 TCAAAGCCATGGAAATTCTAGTTGAAGAGAGCAATGTTCAAAGAGTCGATGCTCCTGTCA 302 | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289 TTAAAGCTATGGAGATTCTAGTTGAAGAGAGCAATGTTCAAAGAGTCGATGCTCCTGTCA 348 Query 303 CTATATGTGGCGACATTCATGGGCAGTTCTATGACATGAAAGAGCTTTTCAAAGTCGGCG 362 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct 349 CTATATGTGGCGACATTCATGGACAGTTCTATGACATGAAAGAGCTTTTCAAAGTTGGGG 408 Query 363 GTGATTGCCCTAAGA-CAAGTTATTTGTTTCTTGGAGATTTTGTTGACCGAGGTTTTTAT 421 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 409 GTGATTGCCCTAAGACCAA-TTATTTGTTTCTTGGAGATTTTGTTGACCGAGGTTTTTAT 467 Query 422 TCAGTTGAGACATTTCTACTTCTTCTAGCTCTCAAGGTTAGATATCCAGACCGTATAACT 481 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468 TCGGTTGAGACATTTCTACTTCTTCTAGCTCTCAAGGTTAGATATCCAGACCGTATAACT 527 Query 482 CTCATTAGAGGGAACCACGAGAGCCGGCAGATTACGCAGGTATATGGTTTTTATGATGAG 541 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 528 CTCATTAGAGGGAACCACGAGAGCCGGCAGATTACGCAGGTATATGGATTTTATGATGAG 587 Query 542 TGCCTACGTAAATATGGCTCTGTAAATGTTTGGAGATATTGCACAGATATCTTTGACTAC 601 || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 588 TGTCTGCGTAAATATGGCTCTGTAAATGTTTGGAGATACTGCACAGATATCTTTGACTAC 647 Query 602 TTGAGTCTTTCAGCTCTTGTCGAGAACAAGATATTTTGTGTTCATGGAGGTCTCTCTCCA 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 648 TTGAGTCTTTCAGCTCTTGTCGAGAACAAGATATTTTGTGTTCATGGAGGTCTCTCTCCA 707 Query 662 GCTATTATGACTCTAGACCAGATCAGGGCTATTGATCGAAAGCAAGAAGTACCACATGAT 721 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 708 GCTATTATGACTCTAGACCAGATCAGGGCTATTGATCGAAAGCAAGAAGTACCACATGAT 767 Query 722 GGTGCCATGTGTGATCTTTTATGGTCTGATCCAGAAGATATTGTCGATGGCTGGGGATTG 781 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 768 GGTGCTATGTGTGATCTTTTATGGTCTGATCCAGAAGATATTGTCGATGGTTGGGGATTG 827 Query 782 AGTCCACGTGGTGCCGGATTCCTTTTCGGTGGCAGTGTTGTTACGTCTTTTAACCACTCA 841 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 828 AGTCCCCGTGGTGCCGGATTCCTTTTCGGCGGCAGTGTTGTTACGTCTTTTAACCACTCA 887 Query 842 AACAACATTGATTACATATGTCGAGCTCATCAGCTAGTTATGGAAGGTTACAAATGGATG 901 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 888 AACAACATTGATTACATATGTCGAGCTCATCAGCTAGTGATGGAAGGTTACAAATGGATG 947 Query 902 TTCAATAGCCAGATAGTCACTGTTTGGTCTGCCCCAAATTACTGTTATAGATGCGGTAAT 961 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 948 TTCAATAGCCAGATAGTCACTGTTTGGTCTGCCCCAAATTACTGTTATAGATGCGGTAAT 1007 Query 962 GTTGCTGCAATTCTAGAGCTCGATGAGAATCTAAATAAGGAGTTTCGTGTCTTCGATGCA 1021 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1008 GTAGCTGCAATTCTAGAGCTCGATGAGAATCTAAACAAAGAGTTTCGTGTCTTCGATGCA 1067 Query 1022 GCCCCACAAGAATCGAGAGGAGCTCTAGCCAAGAAACCTGCACCTGATTATTTCCTGTGA 1081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1068 GCCCCACAAGAATCGAGAGGAGCTCTAGCCAAGAAACCTGCACCTGATTATTTCCTGTGA 1127 Query 1082 GACGCAAAACAGTGAAAACAGAAATTGGTTCTTTCTTCTCATTGCAGAGCACGAAAACTA 1141 ||||||| ||||| ||||||| |||||| ||||||||||||||||||| |||| ||| Sbjct 1128 GACGCAA----GTGAATACAGAAACTGGTTCCTTCTTCTCATTGCAGAGCAAGAAAGCTA 1183 Query 1142 CCCAAAATCATCGGTGTATAGGTTGTAAAA 1171 |||||||||||||||||||||||||||||| Sbjct 1184 CCCAAAATCATCGGTGTATAGGTTGTAAAA 1213 Score = 119 bits (64), Expect = 7e-26 Identities = 72/75 (96%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 1 GGGGAGAAAACACCCCTTCGGAGAGGAGCAAAGCCTCTCCTGGGGAAGAAGAAGAA---C 57 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13 GGGGAGAAAACACCCCTTCGGAGAGGAGCAAAGCCTCTCCTGGGGAAGAAGAAGAAGAAC 72 Query 58 ACGACTTTTTGCTTC 72 ||||||||||||||| Sbjct 73 ACGACTTTTTGCTTC 87 > AT4G26720.1 | Symbols: PPX1, PPX-1 | protein phosphatase X 1 | chr4:13470032-13472342 REVERSE LENGTH=1471 Length=1471 Score = 1013 bits (548), Expect = 0.0 Identities = 801/924 (87%), Gaps = 14/924 (2%) Strand=Plus/Plus Query 161 AAAATGTCAGACATAGACCAGCAAATAGAGCAGCTAAAACGCTGCGAGCCTTTGAAG-GA 219 |||||||||||| |||| | |||||||| |||||| || || ||||| || ||| || || Sbjct 186 AAAATGTCAGACCTAGATCGGCAAATAGGGCAGCTTAAGCGATGCGAACCATTG-AGCGA 244 Query 220 ATCAGAAGTGAAAGCTCTTTGTCTCAAAGCCATGGAAATTCTAGTTGAAGAGAGCAATGT 279 ||| || ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct 245 ATCGGAGGTGAAGGCTCTTTGCCTCAAAGCCATGGAAATTCTTGTTGAAGAGAGTAATGT 304 Query 280 TCAAAGAGTCGATGCTCCTGTCACTATATGTGGCGACATTCATGGGCAGTTCTATGACAT 339 ||| ||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||| || Sbjct 305 TCAGAGAGTTGATGCCCCTGTCACTTTATGTGGTGACATCCATGGGCAGTTCTATGATAT 364 Query 340 GAAAGAGCTTTTCAAAGTCGGCGGTGATTGCCCTAAGA-CAAGTTATTTGTTTCTTGGAG 398 || |||||||||||||| || |||||||| ||||||| ||| ||||||||| | |||| Sbjct 365 GATGGAGCTTTTCAAAGTTGGGGGTGATTGTCCTAAGACCAA-CTATTTGTTTATGGGAG 423 Query 399 ATTTTGTTGACCGAGGTTTTTATTCAGTTGAGACATTTCTACTTCTTCTAGCTCTCAAGG 458 |||||||||| || || | |||||| |||||||||||||||||||| || || ||||||| Sbjct 424 ATTTTGTTGATCGTGGATATTATTCGGTTGAGACATTTCTACTTCTACTCGCACTCAAGG 483 Query 459 TTAGATATCCAGACCGTATAACTCTCATTAGAGGGAACCACGAGAGCCGGCAGATTACGC 518 |||||||||||||||| ||||||||||| ||||| ||||| || ||| |||| || || | Sbjct 484 TTAGATATCCAGACCGCATAACTCTCATCAGAGGAAACCATGAAAGCAGGCAAATCACAC 543 Query 519 AGGTATATGGTTTTTATGATGAGTGCCTACGTAAATATGGCTCTGT-AAATGTTTGGAGA 577 |||| ||||| |||||||||||||| | ||||||||||||||| | |||||| |||||| Sbjct 544 AGGTTTATGGATTTTATGATGAGTGTTTGCGTAAATATGGCTCT-TCAAATGTCTGGAGA 602 Query 578 TATTGCACAGATATCTTTGACTACTTGAGTCTTTCAGCTCTTGTCGAGAACAAGATATTT 637 || ||||| || || ||||||||| |||||||||||||| |||| |||||||||||||| Sbjct 603 TACTGCACCGACATTTTTGACTACATGAGTCTTTCAGCTGTTGTGGAGAACAAGATATTC 662 Query 638 TGTGTTCATGGAGGTCTCTCTCCAGCTATTATGACTCTAGACCAGATCAGGGCTATTGAT 697 ||||||||||| ||||| |||||||||||||||||||| || ||||| ||| | ||||| Sbjct 663 TGTGTTCATGGTGGTCTTTCTCCAGCTATTATGACTCTTGATCAGATTAGGACAATTGAC 722 Query 698 CGAAAGCAAGAAGTACCACATGATGGTGCCATGTGTGATCTTTTATGGTCTGATCCAGAA 757 || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 723 CGGAAGCAAGAAGTACCACATGATGGTGCCATGTGTGATCTCCTATGGTCTGATCCTGAA 782 Query 758 GATATTGTCGATGGCTGGGGATTGAGTCCACGTGGTGCCGGATTCCTTTTCGGTGGCAGT 817 |||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct 783 GATATTGTTGATGGCTGGGGATTGAGCCCTCGTGGTGCCGGATTCCTTTTTGGTGGCAGT 842 Query 818 GTTGTTACGTCTTTTAACCACTCAAACAACATTGATTACATATGTC-GAGCTCATCAGCT 876 ||||| |||||||||||||||||||||||||| || |||||| | | | || ||||| || Sbjct 843 GTTGTCACGTCTTTTAACCACTCAAACAACATAGACTACATA-GCCCGTGCCCATCAACT 901 Query 877 AGTTATGGAAGGTTACAAATGGATGTTCAATAGCCAGATAGTCACTGTTTGGTCTGCCCC 936 ||||||||| ||||||||||||||||| |||||||||| || || || ||||| ||||| Sbjct 902 AGTTATGGAGGGTTACAAATGGATGTTTGATAGCCAGATTGTGACAGTGTGGTCAGCCCC 961 Query 937 AAATTACTGTTATAGATGCGGTAATGTTGCTGCAATTCTAGAGCTCGATGAGAATCTAAA 996 |||||||||||| |||||||||||||| ||| ||||||||||||| || ||||||||||| Sbjct 962 AAATTACTGTTACAGATGCGGTAATGTGGCTTCAATTCTAGAGCTTGACGAGAATCTAAA 1021 Query 997 TAAGGAGTTTCGTGTCTTCGATGCAGCCCCA-CAAGAATCGAGAGGAGC-TCTAGCCAAG 1054 ||| || || ||||| || |||||||||| | || || |||||||| || || ||||| Sbjct 1022 TAAAGAATTCCGTGTGTTTGATGCAGCCC-AGCAGGACTCGAGAGG-GCCTCCCGCCAA- 1078 Query 1055 AAA-CCTGCACCTGATTATTTCCT 1077 ||| || || |||||||| ||||| Sbjct 1079 AAAGCCGGCCCCTGATTACTTCCT 1102 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57479624025 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5