BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495722 Length=1030 Score E Sequences producing significant alignments: (Bits) Value AT5G56320.1 | Symbols: ATEXPA14, EXP14, ATEXP14, ATHEXP ALPHA 1... 1279 0.0 AT5G05290.1 | Symbols: ATEXPA2, EXP2, ATEXP2, ATHEXP ALPHA 1.12... 139 5e-32 > AT5G56320.1 | Symbols: ATEXPA14, EXP14, ATEXP14, ATHEXP ALPHA 1.5, EXPA14 | expansin A14 | chr5:22808641-22810237 FORWARD LENGTH=1203 Length=1203 Score = 1279 bits (692), Expect = 0.0 Identities = 786/831 (95%), Gaps = 7/831 (1%) Strand=Plus/Plus Query 23 CtttttttttCTTTCTCCAGGCCATTGTaaaaaaaaGGCAGAGAAAATGGAGATTTTCGG 82 ||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||| || Sbjct 60 CTTTTTTTTTCTTTCTCCAAGCCATTG-AATAAAAAGGCAGAGAAAATGGAGTTTTTTGG 118 Query 83 -AAAAGTGATAATGTCATTGAGTCTTATGATGATGTTGATGTGGAAGAGTGTGGATGGTT 141 |||| ||||||| ||||||||||||||||||||| | ||||||||||| |||||||||| Sbjct 119 TAAAA-TGATAATTTCATTGAGTCTTATGATGATGATAATGTGGAAGAGCGTGGATGGTT 177 Query 142 ACAGTAGTGGTTGGGTCAATGCTCGAGCTACATTCTATGGAGGTGCTGATGCTTCTGGCA 201 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 178 ACAGTAGTGGTTGGGTCAATGCTCGAGCCACATTCTATGGAGGAGCTGATGCTTCTGGCA 237 Query 202 CCATGGGCGGCGCGTGTGGTTACGGGAACTTATACAGTCAAGGCTACGGAACGAACACGG 261 ||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||| Sbjct 238 CCATGGGCGGCGCGTGTGGTTACGGAAACTTATACAGTCAAGGATACGGCACTAACACGG 297 Query 262 CGGCTCTAAGCACGGCTCTATTCAACGGCGGCCAAGGCTGCGGCGCTTGTTTTCAGATAA 321 ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||| Sbjct 298 CGGCTCTAAGCACGGCTCTATTCAACGGCGGCCAAAGCTGTGGTGCTTGTTTTCAGATAA 357 Query 322 AATGCGTAAACGACCCAAAATGGTGTCTCCGAGGAACAATCACCGTCACCGGAACAAACT 381 |||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||| Sbjct 358 AATGCGTAGACGACCCAAAATGGTGTATCGGTGGAACAATCACCGTCACCGGAACAAACT 417 Query 382 TTTGTCCACCCAACTTTGCTCAAGCCAACAACGCCGGAGGTTGGTGTAATCCTCCTCAAC 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 TTTGTCCACCCAACTTTGCTCAAGCCAACAACGCCGGAGGTTGGTGTAATCCTCCTCAAC 477 Query 442 ATCACTTCGATTTAGCTCAGCCCATCTTCCTCCGCATCGCTCAATACAAAGCCGGTGTCG 501 | |||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct 478 ACCACTTCGATTTAGCTCAGCCCATCTTCCTCCGTATTGCTCAATACAAAGCCGGCGTCG 537 Query 502 TCCCCGTCCAATACCGGAGAGTGGCTTGCCGGAGAAAAGGAGGAATAAGATTCACGATCA 561 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 TCCCTGTCCAATACCGGAGAGTGGCTTGCCGGAGAAAAGGAGGAATAAGATTCACGATCA 597 Query 562 ACGGTCACTCATACTTCAACCTCGTACTCATAACCAACGTCGCCGGCGCCGGAGATGTTG 621 ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 598 ACGGTCATTCATACTTCAACCTCGTACTTATAACCAACGTCGCCGGCGCCGGAGATGTTA 657 Query 622 TCTCCGTCTCCATTAAAGGAACCAGA-ACAGGTTGGCAAAGCATGTCAAGAAACTGGGGA 680 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| Sbjct 658 TCTCCGTCTCCATTAAAGGAACCA-ATACACGTTGGCAAAGCATGTCAAGAAACTGGGGA 716 Query 681 CAGAATTGGCAAAGCAACT-CAAATCTTGATGGTCAAGCTTTGTCCTTTAAAGTAACAAC 739 ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| Sbjct 717 CAGAATTGGCAAAGCAA-TGCAAAACTTGATGGTCAAGCTTTGTCCTTTAAAGTAACAAC 775 Query 740 TAGTGATGGCCGTACAGTTGTCTCTAACAATGCTACTCCGCTTAACTGGAGCTTTGGACA 799 ||||||||||||||||||| | |||||||||||||| || | |||||||||||| ||||| Sbjct 776 TAGTGATGGCCGTACAGTTATATCTAACAATGCTACACCACGTAACTGGAGCTTCGGACA 835 Query 800 GACTTATACCGGAAAACAGTTCGGGGCTCAGAGGTGATGATGACGTGGACT 850 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 836 GACTTATACCGGAAAACAGTTCCGGGCTCAGAGGTGATGATGACGTGGACT 886 Score = 213 bits (115), Expect = 3e-54 Identities = 168/190 (88%), Gaps = 17/190 (9%) Strand=Plus/Plus Query 848 ACTTATTACTGATTTTGGAGTTTTCTAGAGTTTGCATAGTTTGaaaaaaaG-TTTCAGGA 906 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | Sbjct 912 ACTTATTACTGATTTTGGAGTTTTCTAGAGTTTGCATAGTTTG-AAAAAAGTTTTCA-G- 968 Query 907 GTTTATCTGATTAACCCTAATCAAAATAACCAATTTCTGAATGGC-G-----GAGGTTTT 960 | | ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 969 G---A----ATTAACCCTAATCAAAATAACCAATTTCTAAATGGCGGAAATCGAGGTTTT 1021 Query 961 TTATCACCGGCAGCTTTTGTAATTCGCCGGTGAGACTGAGGTGTTTTCACCCGCCGCTTG 1020 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1022 TTCTCACTGGCAGCTTTTGTAATTCGCCGGTGAGACTGAGGTGTTTTCACCCGCCGCCTG 1081 Query 1021 AGTAATTGAG 1030 ||| |||||| Sbjct 1082 AGTGATTGAG 1091 > AT5G05290.1 | Symbols: ATEXPA2, EXP2, ATEXP2, ATHEXP ALPHA 1.12, EXPA2 | expansin A2 | chr5:1568694-1569864 FORWARD LENGTH=978 Length=978 Score = 139 bits (75), Expect = 5e-32 Identities = 449/622 (72%), Gaps = 55/622 (9%) Strand=Plus/Plus Query 168 GCTACATTCTATGGAGGTGCTGATGCTTCTGGCACCATGGGCGGCGCGTGTGGTTACGGG 227 ||||| |||||||| || |||||||| || ||||| ||||| || || ||||| ||||| Sbjct 167 GCTACCTTCTATGGTGGAGCTGATGCATCCGGCACAATGGGTGGTGCTTGTGGGTACGGT 226 Query 228 AACTTATACAGTCAAGGCTA-CGG-AACGAACACGGCGGCTCTAAGCACGGCTCTATTCA 285 |||||| |||| |||||||| || || || || |||||| | ||||||||| | |||| Sbjct 227 AACTTACACAGCCAAGGCTATGGGCTAC-AA-ACCGCGGCTTTGAGCACGGCTTTGTTCA 284 Query 286 ACGGCGGCCAAG-GCTGCGGCGCTTGTTTTCAGATAAAATGCGTA-AACGACCCAAAATG 343 | | || | || || || || || ||| || || | || | | | || || | || Sbjct 285 ATAGTGGGC-AGAAATGTGGGGCCTGCTTTGAGCTACAGTGTG-AGGATGATCCTGAGTG 342 Query 344 GTGTC-TCCGAGGAACAATCACCGTCACCGG-AACAAACTTTTGTCCACCCAACTTTG-C 400 ||| | ||| || | |||| |||| ||| |||||||| ||||| || ||||||| | Sbjct 343 GTG-CATCCCTGGTTCCATCATCGTC-TCGGCTACAAACTTCTGTCCTCCAAACTTTGCC 400 Query 401 TCAAGCCAACAACGCCGGAGGTTGGTGTAATCCTCCTC-AACATCACTTCGATTTAGCTC 459 | ||| || | || |||||||| |||||||||| | | ||||| || || || | Sbjct 401 T-TAGCTAATGATAATGGTGGTTGGTGCAATCCTCCTCTTA-AGCACTTTGACTTGGC-C 457 Query 460 -AGCCCATCTTCCTCC-GCATCGCTCAATACAAAGCCGGTG-TCGTCCCCGTC-CAATAC 515 |||| |||||||| | |||||||| ||| ||| || | |||| || ||| | || Sbjct 458 GAGCCTGCCTTCCTCCAG-ATCGCTCAGTACCGAGCTGG-GATCGTTCCTGTCGC-AT-T 513 Query 516 CGGAGAGTGGCTTGCC--G-GAGAAA--AGGAGGAATAAGATTCACGATCAACGGTCACT 570 | || || || || || | |||||| ||||| ||||| || ||||| ||||| | | Sbjct 514 CAGA-AG-GG-TT-CCATGTGAGAAAGGTGGAGGGATAAGGTTTACGATAAACGG-GAAT 568 Query 571 -CATACTTCAACCTCGTACTCATAACCAACGTCGCCGGCGCCGGAGATGT-TGTCTCCGT 628 |||| ||| ||||||| || || || || || | || || |||||| | | |||| Sbjct 569 CCATATTTCGACCTCGTGCTAATCACGAATGTGGGTGGTGCTGGAGATATAAG-GGCCGT 627 Query 629 CTCCATT-AAAGGAAC-CAGA-ACAGGT---TGGCAAAGCATGTCAAGAAACTGGGGACA 682 || | || ||||| | || | |||| | |||||| ||||||||||||||||||||| Sbjct 628 CT-CTTTGAAAGG--CTCAAAGACAGATCAGTGGCAATCCATGTCAAGAAACTGGGGACA 684 Query 683 GAATTGGCAAAGCAACTCAAATCTT-GATGGTCAA-GCTTTGTCCTTTA-AAGTAACA-A 738 |||||||||||||||| | | || || |||||| || || || ||| |||| || | Sbjct 685 GAATTGGCAAAGCAACACTTACCTCAGA-GGTCAAAGCCTT-TC-TTTCCAAGTCACTGA 741 Query 739 CTAGTGATGGCCGTACAGTTGT 760 ||||||||| || || ||||| Sbjct 742 -TAGTGATGGTCGGACTGTTGT 762 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50485317735 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5