BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495739 Length=2305 Score E Sequences producing significant alignments: (Bits) Value AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein... 3249 0.0 AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein... 1194 0.0 AT1G33740.1 | Symbols: | pseudogene, putative chaperonin 60 be... 121 4e-26 > AT5G56500.1 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:22873791-22877396 FORWARD LENGTH=2318 Length=2318 Score = 3249 bits (1759), Expect = 0.0 Identities = 2144/2322 (92%), Gaps = 57/2322 (2%) Strand=Plus/Plus Query 1 AAACCTCTCGCAGTCGCTAAAACCCTTGATCCATCTCTTGATCGCTGATTTTTGC-AGAG 59 ||||||||| ||||||||||||||||||| |||||||||||||||| | || | | || Sbjct 27 AAACCTCTCTCAGTCGCTAAAACCCTTGAACCATCTCTTGATCGCT-A-GCTT-CTAAAG 83 Query 60 AGTG--AAACTATGGCATCAACTTTTAGCGCAACGTCTTCAATGGGTTCATGTTTGGCTC 117 |||| |||| ||||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct 84 AGTGAAAAACCATGGCATCAACCTTTAGCGCAACGTCGTCAATGGGTTCATCTTTGGCTC 143 Query 118 CTCCTTCGAATCGATTGTCATCTTTTGTTTCGATCTCATCAAGCTCTTTTGGAAAGAGTC 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 144 CTCCTTCGAATCGATTGTCATCTTTTGTTTCGATCTCATCAAGCTCTTTTGGAAGGACTC 203 Query 178 AGACTTTTGCTCAGAGGAAAGCAAGGTTTCCTAAAATCTATGCGGCTAAGCAATTGCATT 237 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 204 AGAGTATTGCTCAGAGGAAAGCAAGGTTTCCTAAAATATATGCGGCTAAGCAATTGCATT 263 Query 238 TCAATAAGGACGGGACTGCGATTAAGAAGCTTCAAGCTGGTGTGAATAAACTTGCGGATT 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 264 TCAATAAGGACGGGACTGCGATTAAGAAGCTTCAAGCTGGTGTGAATAAACTTGCGGATT 323 Query 298 TAGTTGGGGTTACTTTAGGTCCTAAAGGCAGGAATGTTGTTTTAGAGAGCAAATACGGTT 357 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 324 TAGTTGGGGTTACTTTAGGTCCTAAAGGCAGGAATGTTGTTCTAGAGAGCAAATACGGTT 383 Query 358 CCCCTAGAATCGTAAATGACGGTGTTACAGTCGCTAGAGAGGTTGAGCTTGAGGATCCAG 417 ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 384 CCCCTAGAATCGTTAATGATGGTGTTACGGTCGCTAGAGAGGTTGAGCTTGAGGATCCAG 443 Query 418 TTGAGAACATTGGTGCTAAGCTAGTGAGACAAGCTGCTTCCAAGACTAATGACTTAGCTG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 444 TTGAGAACATTGGTGCTAAGCTAGTGAGACAAGCTGCTTCCAAGACTAATGACTTAGCTG 503 Query 478 GTGATGGAACAACGACTTCTGTTGTTCTTGCGCAAGGTCTCATCGCCGAAGGTGTAAAGG 537 ||||||||||||||||||||||||||||||| |||||||| || || ||||||||||||| Sbjct 504 GTGATGGAACAACGACTTCTGTTGTTCTTGCTCAAGGTCTTATTGCTGAAGGTGTAAAGG 563 Query 538 TGGTGGCTGCTGGTGCAAATCCGGTTTTGATTACCAGAGGTATCGAGAAAACCACCAAGG 597 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| | Sbjct 564 TGGTAGCTGCTGGTGCAAATCCTGTTTTGATTACCAGAGGTATTGAGAAAACCACCAAAG 623 Query 598 CTCTTGTTGCTGAGTTGAAGAAAATGTCAAAGGAGGTCGAAGACAGTGAACTAGCAGATG 657 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 624 CTCTTGTGGCTGAGTTGAAGAAAATGTCAAAGGAGGTTGAAGACAGTGAACTAGCAGATG 683 Query 658 TTGCAGCGGTTAGTGCAGGAAACAATTACGAAGTTGGTAATATGATTGCGGAAGCAATGG 717 ||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct 684 TTGCAGCAGTTAGTGCAGGAAACAATTACGAAGTAGGCAATATGATTGCAGAAGCAATGG 743 Query 718 CAAAAGTTGGTCGTAAGGGTGTTGTTACTCTCGAGGAAGGAAAAAGCGCTGAGAACAGCC 777 |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 744 CAAAAGTTGGTCGTAAAGGTGTTGTCACTCTAGAGGAAGGCAAAAGCGCTGAGAACAGCC 803 Query 778 TTTATGTTGTTGAAGGAATGCAATTTGATCGTGGTTATATCTCTCCTTACTTTGTCACCG 837 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 TTTACGTTGTTGAAGGAATGCAATTTGATCGTGGTTATATCTCTCCTTACTTTGTCACCG 863 Query 838 ACAGTGAGAAAATGTCTGCAGAATACGAGAACTGCAAGTTGTTTCTTGTTGACaaaaaaa 897 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 864 ACAGTGAGAAAATGTGTGCAGAATATGAGAACTGCAAGTTGTTTCTTGTTGACAAAAAGA 923 Query 898 TAACAAATGCTAGAGACATTATCAACATTCTGGAAGATGCGATTAAAGGTGGATACCCGC 957 |||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| Sbjct 924 TAACAAATGCTAGAGATATTATTAGCATTCTGGAAGATGCGATTAAAGGTGGATACCCGC 983 Query 958 TTTTGATCATTGCTGAAGATATTGAGCAAGAGCCATTAGCGACTCTTGTTGTTAACAAGC 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 984 TTTTGATCATTGCTGAAGATATTGAGCAAGAGCCATTAGCGACTCTTGTTGTTAACAAGC 1043 Query 1018 TTCGCGGAACAATAAAAGTTGCTGCTCTGAAAGCTCCTGGATTTGGAGAGAGGAAAAGCC 1077 |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1044 TTCGTGGGACAATAAAAGTTGCTGCTTTGAAAGCTCCTGGATTTGGAGAGAGGAAAAGCC 1103 Query 1078 AGTACCTTGATGACATTGCTGCTCTTACAGGAGCTACTGTGATTAGGGAAGAAGTTGGGC 1137 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 1104 AGTACCTTGATGACATTGCTGCGCTTACAGGAGCTACTGTGATTAGGGAAGAAGTTGGAC 1163 Query 1138 TTCAGTTGGAGAAAGTTGGACCAGAAGTTTTGGGTAATGCTGGTAAAGTGGTTCTCACAA 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1164 TTCAGTTGGAGAAAGTTGGACCAGAAGTTTTGGGTAATGCTGGTAAAGTGGTTCTCACAA 1223 Query 1198 AAGACACTACGACGATAGTTGGTGATGGAAGTACTGAAGAAGTTGTGAAGAAGAGAGTTG 1257 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1224 AAGATACTACAACGATAGTTGGTGATGGAAGTACTGAAGAAGTTGTGAAGAAGAGAGTTG 1283 Query 1258 AACAGATCAAGAATCTTATCGAGGCTGCTGAACAAGACTATGAAAAGGAAAAGCTTAATG 1317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1284 AACAGATCAAGAATCTTATCGAGGCTGCTGAACAAGACTATGAAAAGGAAAAGCTTAATG 1343 Query 1318 AGAGAATTGCTAAATTATCAGGCGGTGTTGCTGTAATTCAGGTTGGAGCTCAAACTGAGA 1377 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1344 AGAGAATTGCTAAATTATCAGGCGGTGTTGCTGTAATTCAGGTTGGAGCACAAACTGAGA 1403 Query 1378 CAGAGCTTAAGGAGAAGAAATTGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTG 1437 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1404 CAGAGCTTAAGGAGAAGAAATTAAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTG 1463 Query 1438 TGGAAGAAGGTATTGTTGTTGGAGGAGGATGTACTCTGCTAAGACTTGCATCGAAAGTGG 1497 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1464 TGGAAGAAGGTATTGTTGTTGGCGGAGGATGTACTCTGCTAAGACTTGCATCGAAAGTGG 1523 Query 1498 ATGCCATTAAAGAGACACTAGCAAACGATGAAGAAAAGGTTGGAGCTGACATTGTTAAGA 1557 | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1524 ACGCTATTAAAGAGACTCTAGCAAACGATGAAGAAAAGGTTGGAGCTGACATTGTTAAGA 1583 Query 1558 AAGCATTGAGCTACCCATTGAAGTTAATCGCCAAGAACGCTGGTGTAAATGGTAGCGTCG 1617 ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct 1584 AAGCATTGAGCTACCCACTGAAGTTAATCGCCAAGAACGCTGGTGTCAATGGCAGCGTTG 1643 Query 1618 TCAGTGAGAAGGTTCTCTCTAGCGACAACCCAAAACACGGTTACAACGCTGCAACTGGCA 1677 |||||||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||||| Sbjct 1644 TCAGTGAGAAGGTTCTTTCTAGTGACAACCCTAAACATGGTTACAATGCTGCAACTGGCA 1703 Query 1678 AATACGAAGATCTAATGGCTGCAGGAATCATTGATCCAACCAAAGTTGTGAGATGTTGCT 1737 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1704 AATACGAAGATCTCATGGCTGCAGGAATCATTGATCCAACCAAAGTTGTGAGATGTTGCC 1763 Query 1738 TAGAGCATGCTTCATCTGTGGCTAAGACATTCTTGATGTCTGATTGTGTGGTTGTGGAGA 1797 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 1764 TAGAGCATGCTTCATCTGTGGCAAAGACATTCTTGATGTCTGATTGTGTTGTTGTGGAGA 1823 Query 1798 TCAAGGAGCCTGAATCAGCAGCTCCTGCTGGTAACCCTATGGACAATTCAGGTTACGGCT 1857 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1824 TCAAGGAGCCTGAATCAGCAGCTCCTGCTGGTAACCCTATGGACAATTCAGGTTACGGCT 1883 Query 1858 TCTAAGTTAGCAATTGAGAAGAGAGTAAGAGTAGTCTCTGAGGAAGCAAAAACCACGACC 1917 |||||||| ||||||||||| |||||| | | | |||| ||||||||| |||||||| Sbjct 1884 TCTAAGTTGGCAATTGAGAACAGAGTA-G--TC--C-CTGATGAAGCAAAAGCCACGACC 1937 Query 1918 AAGCTCTTTATTTCCTGATATGAAACATCTTTTAGCCAATGTAAAAT-TATGTTTTTCCA 1976 ||| |||| | |||||||| |||||| ||||| |||||||||||| | |||||||||||| Sbjct 1938 AAGTTCTTCACTTCCTGATCTGAAACTTCTTTAAGCCAATGTAAATTATATGTTTTTCCA 1997 Query 1977 GTGACCTGAAGAAACATATAATTTGGTT-TCCTGTTCTCTGTTTCTTGATCAAGTGTTTC 2035 |||||||||||||||||||||||||||| | ||||||| | ||| |||||||| |||| Sbjct 1998 GTGACCTGAAGAAACATATAATTTGGTTCTG-TGTTCTCCGATTCAAGATCAAGTTTTTC 2056 Query 2036 AATATGATC--CTTCACGAAAGAATGATATGATTTTGCAGTTTGCAGTGGTCAATAGATT 2093 ||||||| | |||||| ||||| || | |||||||||||| |||||||| | Sbjct 2057 AATATGA-CAACTTCACTAAAGA--GACA--------CAGTTTGCAGTGCTCAATAGACT 2105 Query 2094 TGATTTGGTTAGAGTATCATTTTCTTTCTCTCAAATTAAAACGAAATGTAATGTTGTTGT 2153 |||||| ||||| ||||||||||||| | ||||||||||||||| | | | | | | Sbjct 2106 TGATTTAGTTAG--TATCATTTTCTTTATTTCAAATTAAAACGAAC-G-AG-GATAT-G- 2158 Query 2154 CTCCCGGTTCCTTACCaaaaaaaa---aa-aaGCAA-CTATCAAG-CAAAAT-ACTAAtt 2206 | | | | | | || || || || || ||| | | ||| | |||| |||| || Sbjct 2159 CACAAAAT-CATGAGCAGCAACAAGCCAACAACCAAGC-A-CAATACTAAATTACTACTT 2215 Query 2207 ttttt-t--ttttGTGTGTGGCTTCCATAGCCAATATATATATCTTGATTTCTGTAAAAT 2263 | ||| | |||| | |||||| |||||||||||||| |||||| || |||||| Sbjct 2216 TGTTTGTGGTTTT-T-TGTGGCCTCCATAGCCAATAT------CTTGATA-CTTTAAAAT 2266 Query 2264 TGTAATCTATTTGGTTAGTTCGACAATTCTCTTTACATGAGC 2305 |||||||||||| ||||||| |||||||||||||| ||||| Sbjct 2267 TGTAATCTATTTAATTAGTTCAACAATTCTCTTTACCTGAGC 2308 > AT3G13470.1 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr3:4389256-4392801 FORWARD LENGTH=2093 Length=2093 Score = 1194 bits (646), Expect = 0.0 Identities = 1340/1674 (80%), Gaps = 51/1674 (3%) Strand=Plus/Plus Query 218 TGCGGCTAAGCAATTGCATTTCAATAAGGACGGGACTGCGATTAA-GAAGCTTCAAG-CT 275 ||| || ||| | ||||||||||||||||| |||||| | | ||| ||| |||| || || Sbjct 275 TGCAGCCAAGGAGTTGCATTTCAATAAGGATGGGACTACCA-TAAGGAAACTTC-AGACT 332 Query 276 GGTGTGAATAAACTTGCGGA-TTTAGTTGGGGTTAC-TTTAGGTCCTAAAGGCAGGAATG 333 ||||| || || || ||||| || ||||| || || || || || ||||| || |||| Sbjct 333 GGTGTTAACAAGCTCGCGGACCTT-GTTGGTGTCACACTT-GGACCAAAAGGGAGAAATG 390 Query 334 TTGTT-TTAGAGAGCAAATACGGTTCCCCTAGAATCGTAAATGACGGTGTTACAGTCGCT 392 ||||| || |||||||| || || ||||| ||||| || ||||| ||||| || || || Sbjct 391 TTGTTCTT-GAGAGCAAGTATGGATCCCCAAGAATTGTTAATGATGGTGTCACTGTTGCG 449 Query 393 AGAGAGGTTGAGCTT-GAGGATCCAGTTGAGAACATTGGTGCTAAGCTAGTGAGACAAGC 451 || ||||| ||| || ||||| || ||||||||||||||||| ||||| || || ||||| Sbjct 450 AGGGAGGTCGAG-TTGGAGGACCCGGTTGAGAACATTGGTGCAAAGCTTGTAAGGCAAGC 508 Query 452 TGCTTCCAAGACTAATGACTTAGCTGGTGATGGAACAACGACTTCTGTTGTTCTTGCGCA 511 ||| | ||||| |||||||| |||||||| || ||||| || |||||||||||||| || Sbjct 509 AGCTGCAAAGACCAATGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGCACA 568 Query 512 AGGTCTCATCGCCGAAGGTGTAAAGGTGGTGGCTGCTGGTGCAAATCCGGTTTTGATTAC 571 |||| | || || || ||||| |||||||||||||| ||||| || || || ||||| || Sbjct 569 AGGTTTTATTGCTGAGGGTGTCAAGGTGGTGGCTGCAGGTGCGAACCCTGTATTGATCAC 628 Query 572 CAGAGGTATCGAGAAAACCACCAAGGCTCTT-GTT-GCTGAGTTGAAGA-AAATGTCAAA 628 || || || ||||| || | |||||| || ||| | ||| |||| | ||||| || Sbjct 629 TAGGGGGATTGAGAAGACTGCAAAGGCT-TTGGTTAAC-GAGCTGAA-ACTTATGTCTAA 685 Query 629 GGAGGTCGAAGACAGTGAACTAGCAGATGTTGCAGCGGTTAGTGCAGGAAACAATTACGA 688 |||||| |||||||||||||| || ||||| ||||| |||||||| || || || |||| Sbjct 686 GGAGGTTGAAGACAGTGAACTTGCTGATGTGGCAGCTGTTAGTGCGGGTAATAACCACGA 745 Query 689 AGTTGGTAA-TATGATTGCGGAAGCAATG-GCAAAAGTTGGTC-GTAAGGGTGTTGTTAC 745 |||||| || ||||||||| ||||||||| || |||| ||| | | |||||||| || || Sbjct 746 AGTTGG-AAGTATGATTGCTGAAGCAATGAGC-AAAG-TGGGCAGGAAGGGTGTGGTGAC 802 Query 746 TCTCGAGGAAGGAAAAAGCGCTGAGAACAGCCTTTATGTTGTTGAAGGAATGCAATTTGA 805 || ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 803 CCTGGAGGAGGGAAAAAGCGCTGAGAACAACCTTTATGTTGTGGAAGGAATGCAATTTGA 862 Query 806 TCGTGGTTATATCTCTCCTTACTTTGTCACCGACAGTGAGAAAATGTCTGCAGAATACGA 865 |||||||||||||| || |||||||| || ||||||||||||||||||| || || || Sbjct 863 CCGTGGTTATATCTCCCCATACTTTGTGACAGACAGTGAGAAAATGTCTGTTGAGTATGA 922 Query 866 GAACTGCAAGTTGTTTCTTGTTGACaaaaaaaTAACAAATGCTAGAGA-CATTATCAACA 924 || ||||||||| ||||||||||||| ||| |||| ||||| || || | || | Sbjct 923 CAATTGCAAGTTGCTTCTTGTTGACAAGAAAGTAACCAATGCAAGGGATC-TTGTTGGGG 981 Query 925 TTCTGGAAGATGCGATTAAAGGTGGATACCCGCTTTTGATCATTGCTGAAGATATTGAGC 984 |||| || |||||||||| ||| |||||||| | | || ||||| ||||||||||| | Sbjct 982 TTCTAGAGGATGCGATTAGAGGCGGATACCCAATCCTCATAATTGCAGAAGATATTGAAC 1041 Query 985 AAG-AGCCATTAGCGACTCTTGTTGTTAACAAGCTTCGCGGAACAATAAAAG-TTGCTGC 1042 ||| |||| ||||| ||||||||||||||||||||| | || ||| | ||| |||| || Sbjct 1042 AAGAAGCC-TTAGCTACTCTTGTTGTTAACAAGCTTAGAGGCACACT-GAAGATTGCAGC 1099 Query 1043 TCTGAAAGCTCCTGGATTTGGAGAGAGGAAAAGCCAGTACCTTGATGACATTGCTGCTCT 1102 ||| ||||||||||||||||||||| | || ||||| |||||||| || ||||| ||| Sbjct 1100 TCTCAAAGCTCCTGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGCCATTCT 1159 Query 1103 TACAGGAGCTACTGTGATTAGGGAAGAAGTTGGGC-TTCAGTTGGAGAAAGTTGGACCAG 1161 || ||||| |||||||| || || |||||||| | ||| || || |||| |||| || Sbjct 1160 AACTGGAGCAACTGTGATCAGAGAGGAAGTTGGTCTTTCTCTT-GACAAAGCTGGAAAAG 1218 Query 1162 AAGTTTTGGGTAATGCTGGTAAAGTGGTTCTCACAAAAGACACT-ACGACGATAGTTGGT 1220 | ||| ||||||| ||| || || || || ||||| || | | || || || || ||| Sbjct 1219 AGGTTCTGGGTAACGCTTCCAAGGTTGTCCTGACAAAGGA-AATGACAACAATTGTGGGT 1277 Query 1221 GATGGAAGTACTGAAGAAGTTGTGAAGAAGAGAGTTGAACAGATCAAGAATCTTATCGAG 1280 ||||| | || |||||| ||||| ||| | |||| |||||| | ||||||||| || Sbjct 1278 GATGGGACCACACAAGAAGCAGTGAACAAGCGTGTTGTACAGATTAGGAATCTTATTGA- 1336 Query 1281 GC-TGCTGAACAAGACTATGAAAAGGAAAAGCTT-AATGAGAGAATTGCTAAATTATCAG 1338 || || || |||||||| || |||||||| || |||||||||||||| || | || | Sbjct 1337 GCAAGCGGAGCAAGACTACGAGAAGGAAAA-ATTAAATGAGAGAATTGCGAAGCTCTCTG 1395 Query 1339 GCGGTGTTGCTGTAATTCAGGTTGGAGCTCAAACTGAGACAGAGCTTAAGGAGAAGAAAT 1398 | || ||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct 1396 GTGGAGTTGCTGTAATTCAGGTTGGAGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGC 1455 Query 1399 TGAGAGTTGAAGATGCTCTTAATGCTACAAAGGCTGCTGTGGAAGAAGGTATTGTTGTTG 1458 ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| Sbjct 1456 TGAGAGTGGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAAGGTATTGTCGTTG 1515 Query 1459 GAGGAGGATGTACTCTGCTAAGACTTGCATCGAAAG-TGGATGCCATTAAAGAGACACTA 1517 | || || || |||||||| | |||||||| |||| | |||||||| || || || || Sbjct 1516 GTGGTGGTTGCACTCTGCTCCGGCTTGCATC-AAAGGTCGATGCCATCAAGGATACCCTT 1574 Query 1518 GCAAACGATGAAGAAAAGGTTGGAGCTGACATTGTTAAGAA-AGCATTGAGCTACCCAT- 1575 | ||| |||||||||||||||||||| || |||||||| || |||| |||| ||||| | Sbjct 1575 GAAAATGATGAAGAAAAGGTTGGAGCGGAAATTGTTAA-AAGAGCACTGAGTTACCC-TC 1632 Query 1576 TGAAGTTAATCGCCAAGAACGCTGGTGTAAATGGTAGCGTCGTCAGTGAGAAGGTTCTCT 1635 |||| || || || ||||| |||||||| ||||| || || ||||| |||||||| || Sbjct 1633 TGAAATTGATAGCTAAGAATGCTGGTGTTAATGGAAGTGTTGTCAGCGAGAAGGTGCTGG 1692 Query 1636 CTAGCGACAACCCAAAACACGGTTACAACGCTGCAACTGGCAAATACGAAGATCTAATGG 1695 ||| ||| || ||| || ||||| |||||||| ||||| || ||||| || |||| Sbjct 1693 CTAACGATAATGTGAAATTTGGATACAATGCTGCAACCGGCAAGTATGAAGACCTGATGG 1752 Query 1696 CTGCAGGAATCATTGATCCAACCAAAG-TTGTGAGATGTTGCTTAGAGCATGCTTCATCT 1754 ||||||| ||||| || || || |||| ||||||||||||||||||| ||||| | || Sbjct 1753 CTGCAGGCATCATCGACCCGAC-AAAGGTTGTGAGATGTTGCTTAGAACATGCCGCCTCA 1811 Query 1755 GTGGCTAAGACATTCTTGATGTCTGATTGTGTGGTTGTGGAGATCA-AGGAGCCTGAATC 1813 || || ||||| |||||||||||||| ||||||||||| |||||| || |||| || | Sbjct 1812 GTTGCAAAGACGTTCTTGATGTCTGACTGTGTGGTTGTTGAGATCCCAG-AGCCAGAG-C 1869 Query 1814 AGCAGCTCCTGCTGGTAACCCTATGGACAATTCAGGTTACGGCTTCTAAGTTAG 1867 ||| ||||||||||||||| |||||||| |||||||| || | ||||| ||| Sbjct 1870 --CAGTTCCTGCTGGTAACCCAATGGACAACTCAGGTTATGGATACTAAGATAG 1921 > AT1G33740.1 | Symbols: | pseudogene, putative chaperonin 60 beta precursor, similar to chaperonin 60 beta precursor GB:JT0901 GI:81601 from (Arabidopsis thaliana); blastp match of 78% identity and 1.2e-11 P-value to PIR|JT0902|JT0902 chaperonin 60 beta - wheat (fragment) | chr1:12230180-12230430 REVERSE LENGTH=251 Length=251 Score = 121 bits (65), Expect = 4e-26 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 1629 GTTCTCTCTAGCGACAACCCAAAACACGGTTACAACGCTGCAACTGGCAAATACGAAGAT 1688 ||||| ||||||||||| || |||| |||||||||||||||||||||||||||| ||||| Sbjct 1 GTTCTTTCTAGCGACAATCCTAAACGCGGTTACAACGCTGCAACTGGCAAATACAAAGAT 60 Query 1689 CTAATGGCTGCAGGAATCATTGATCCAACCAAAGT 1723 ||||||||| || |||||| ||| |||||||||| Sbjct 61 CTAATGGCTACAAAAATCATCGATACAACCAAAGT 95 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114407042055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5