BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg495754
Length=2015
Score E
Sequences producing significant alignments: (Bits) Value
AT5G56630.1 | Symbols: PFK7 | phosphofructokinase 7 | chr5:2292... 2952 0.0
AT4G26270.1 | Symbols: PFK3 | phosphofructokinase 3 | chr4:1330... 1423 0.0
> AT5G56630.1 | Symbols: PFK7 | phosphofructokinase 7 | chr5:22923922-22926963
FORWARD LENGTH=2082
Length=2082
Score = 2952 bits (1598), Expect = 0.0
Identities = 1908/2047 (93%), Gaps = 64/2047 (3%)
Strand=Plus/Plus
Query 24 GTGATCGTCAGCTTtatatatatatataCACGAGAATCTTGTACCCAATTAACATATACA 83
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 45 GTGATCGTCAGCTTTATATAT-TATATACACGAGAATCTTGTACCCAATTAACATATACA 103
Query 84 TACATGT-AA-GTGTG--TGTATGT-ATAT---A--A------TTTTCACTAAATTTTCT 127
||||||| || ||||| ||||| | |||| | | |||||||||| ||||||
Sbjct 104 TACATGTAAATGTGTGTATGTATATAATATAAAATTATTCTCCTTTTCACTAATTTTTCT 163
Query 128 TCAAATACTTTTAATGCCCACCACCTGTTCGATCAAATTCCCAATCTCAAAAAGCTAGAA 187
|||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 164 TCAAATAC-TTTAATGCCCACCACCTGTTCGATCAAATTCCCCATCTCGAAAAGCTAGAA 222
Query 188 CTTTCTTCGTCTCTATTGGTCTCTCACTCTGTCTCTTACCTTTTCTGATTTGTTCTTTCC 247
|||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct 223 CTTTCTTCGTCTCTATTGGTCTCTCACTCTCTCTCTTACCTCTTCTCATTTGTTCTTTCT 282
Query 248 CCTACAAAATTGGGTCATCAAGTATATTGGATCAAAGGGTTTGATTCACGATTTCTCATT 307
||| | ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 283 CCTTCTAAATTGGGTTATCAAGTATATTGGATCAACGGGTTTGATTCACGATTTGTCATT 342
Query 308 TCATCTTCGTGGAGAGAGTTTTTGATCTGATTTGTTGATCGTCTCCGTTATGTCTAGTCC 367
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 343 TCATCTTCGTGGAGAGAG--TTTGATCTGATTTGTTGATCGTCAGCGTTATGTCTAGTCC 400
Query 368 GAGAAGTAACAAGCCGAAGATCGTCAACGGTCCTGGTGGTTATATTCTTCAAGACGTTCC 427
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 401 GAGAAGTAACAAGCCGAAGATTGTCAACGGTCCTGGTGGTTATATTCTACAAGACGTTCC 460
Query 428 TCATCTCATTGATTATCTTCCTGATCTTCCTACTTATCCGAATCCATTGCAAGACAATCC 487
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 461 TCATCTCATTGATTACCTTCCTGATCTTCCTACTTATCCAAATCCATTGCAAGACAATCC 520
Query 488 AGCTTACTCAGTGGTTAAGCAATACTTTGTTGATGCAGATGATAGTGTCCCTGAGAAGGT 547
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 521 AGCTTACTCAGTGGTTAAGCAATACTTTGTTCATGCTGATGATAGTGTCCCTGAGAAGGT 580
Query 548 TGTTGTTCACAAGGATGGTCCAAGAGGAATCCATTTCAGGCGCGCTGGTCCACGTCAAAA 607
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 581 TGTTGTTCACAAGGATGGTCCAAGAGGAGTCCATTTCAGGCGTGCTGGTCCACGTCAAAA 640
Query 608 GGTTTACTTTGAGTCTGATGAAGTGCATGCTTGCATAGTTACATGTGGAGGTCTCTGTCC 667
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 641 GGTTTACTTTGAGTCTGACGAAGTGCATGCTTGTATAGTTACATGTGGAGGTCTCTGTCC 700
Query 668 CGGTCTCAATACCGTCATTAGAGAAATTGTGAGCAGCTTATCATACATGTATGGAGTGAA 727
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 701 CGGTCTCAATACCGTGATTAGAGAAGTTGTGAGCAGCTTATCATACATGTATGGAGTAAA 760
Query 728 GAGAATCCTTGGAATCGATGGTGGATACAGAGGATTCTACGCCAAGAATACTATCCCCTT 787
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 761 GAGAATTCTTGGAATCGATGGTGGATACAGAGGATTTTACGCCAAGAATACTATCCCCTT 820
Query 788 AAACTCTAAAGTCGTGAATGATATCCATAAGCGCGGAGGAACCATTC-TCGGGACCTCAA 846
|||||||||||||||||||||||||||||| |||||||||| || || | ||||||||||
Sbjct 821 AAACTCTAAAGTCGTGAATGATATCCATAAACGCGGAGGAA-CAATCATTGGGACCTCAA 879
Query 847 GAGGTGGACACGATACC-ACGAAGATAGTTGATAGCATTCAAGATCGAGGAATTAATCAG 905
|||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 880 GAGGTGGACATGATACCAAC-AAGATAGTTGATAGCATTCAAGATCGAGGAATCAATCAG 938
Query 906 GTTTACATTATTGGAGGAGATGGAACCCAGAGAGGTGCTTCAGTAATATTTGAGGAAATT 965
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 939 GTTTACATTATTGGAGGAGATGGAACCCAGCGAGGTGCTTCAGTAATATTTGAGGAAATT 998
Query 966 AGAAGACGTGGACTTAAAGTTGCTGTGGTTGGAATTCCGAAAACTATTGATAATGATATT 1025
||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 999 AGAAGACGTCGACTAAAAGTTGCTGTGGTTGGAATTCCAAAAACTATTGATAATGATATT 1058
Query 1026 CCTGTAATAGACAAATCTTTTGGGTTTGACACTGCTGTGGAGGAAGCTCAACGAGCAATT 1085
|| || ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1059 CCGGTGATAGATAAATCTTTTGGGTTTGACACTGCTGTGGAGGAAGCTCAACGAGCGATT 1118
Query 1086 AACGCAGCACATGTCGAAGCTGAGAGCAATGAGAATGGTATCGGTTTTGTCAAGCTTATG 1145
|||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1119 AACGCAGCACATGTTGAAGCCGAGAGTAATGAGAATGGTATCGGTTTTGTCAAGCTTATG 1178
Query 1146 GGTCGTTACAGCGGGTTCATAGCGATGTATGCTACATTAGCCAGCAGAGATGTTGACTGT 1205
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 GGTCGTTACAGCGGGTACATAGCGATGTATGCTACATTAGCCAGCAGAGATGTTGACTGT 1238
Query 1206 TGCTTGATTCCTGAGTCACCATTTTACCTCGAAGGAGAAGGTGGACTCTTTGAGTTCGTA 1265
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1239 TGCTTGATTCCCGAGTCACCATTTTACCTCGAAGGAGAAGGTGGACTCTTTGAGTTCATA 1298
Query 1266 GAGAGACGGCTCAAGGAGCATGGTCACATGGTGATTGTTCTTGCTGAAGGTGCAGGACAG 1325
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1299 GAGAGACGGCTGAAGGATCATGGTCACATGGTGATTGTTCTTGCTGAGGGTGCAGGACAG 1358
Query 1326 GATTTGATGTGCAAAAGCATGGAATCTACTCTTAAGGATGCTTCTGGGAACAAACTTCTT 1385
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1359 GATTTGATGTGCAAAAGCATGGAATCTACTCCTATGGATGCTTCTGGGAACAAACTTCTT 1418
Query 1386 AAAGATGTCGGCTTGTGGCTATCACAAAGCATCAAGGTTTATTTTAATAAGAATAAGATG 1445
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 1419 AAAGATGTCGGCTTGTGGCTATCACAAAGCATCAAGGATCATTTTAAGAAGAATAAGATG 1478
Query 1446 GTGATGAATCTCAAATACATTGATCCTACATACATGATCCGGGCTGTTCCAAGTAATGCA 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479 GTGATGAATCTCAAATACATTGATCCTACATACATGATCCGGGCTGTTCCAAGTAATGCA 1538
Query 1506 TCAGACAATGTTTACTGTACACTTCTTGCTCAGAGCGCGGTTCATGGTGCAATGGCTGGT 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1539 TCAGACAATGTTTACTGTACACTTCTTGCTCAGAGCGCGGTTCATGGTGCAATGGCTGGT 1598
Query 1566 TACACTGGCTACACCAGTGGTCTTGTCAATGGAAGACAAACATACATCCCTTACTACAGG 1625
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1599 TACACTGGCTACACCAGTGGTCTTGTCAATGGAAGACAAACATACATCCCTTTCTACAGG 1658
Query 1626 ATAACAGAGACGCAGAACAATGTAGTAATTACGGATAGAATGTGGGCGAGGTTATTGTCT 1685
||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 1659 ATAACAGAGACCCAGAACAATGTAGTGATTACGGATAGAATGTGGGCGAGGCTATTGTCT 1718
Query 1686 TCTACGAACCAGCCAAGTTTCTTGGGGCCTAAGGATATACCTGAAGAGAAGAAAGAGTTG 1745
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1719 TCTACGAACCAGCCAAGTTTCTTGGGGCCTAAGGATACATCTGAAGAGAAGAAAGAGTTG 1778
Query 1746 CCGGAAACACCGCTTCTTGACGACGGAGCTGTCGATATTCCTCCTGTGACTAAAGAAGTC 1805
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1779 CCGGAAACACCGCTTCTTGACGACGGAGCTGTCGATATTCCTCCTGTGACTAAAGAGGTC 1838
Query 1806 ACCAAGTGAAGAAGTTGCAGGGCATAAT--T---A--------CTCAG-GCGTTTCTGCA 1851
|| ||||||||||||||||||||||||| | | ||||| | ||| ||| |
Sbjct 1839 ACTAAGTGAAGAAGTTGCAGGGCATAATAATGGCATATGTATACTCAGAGGGTT-CTGTA 1897
Query 1852 AACGATGCCGTTTTAGGCGAAAGTGAAATAATTGTTATCTTAAC-AATTTTGCCCTTTTG 1910
| ||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct 1898 ACCGATGCCGTTTCAGGCGAAAGTGAAATAATTGTTATTTTAACGAATTT-GCCCTTTTG 1956
Query 1911 T--A-----A-ACACAA-A----------TTTTAGTTTTCTTTCTAGATGTTTAGTTTTG 1951
| | | |||||| | ||||||||||||| |||||||||||||||||
Sbjct 1957 TGTATGTGCATACACAACACAAACACAAATTTTAGTTTTCTT-CTAGATGTTTAGTTTTG 2015
Query 1952 TAACCCTCTTTGCATTTTCCACATCTGAATGAATGAATGAAGT--TA-TCTTCGTTACGT 2008
||| ||| ||||||||||||||| |||||| |||||||||||| || |||||||||| |
Sbjct 2016 TAATCCTTTTTGCATTTTCCACAACTGAATAAATGAATGAAGTAATAATCTTCGTTACTT 2075
Query 2009 TGATCCT 2015
|||||||
Sbjct 2076 TGATCCT 2082
> AT4G26270.1 | Symbols: PFK3 | phosphofructokinase 3 | chr4:13300795-13304347
REVERSE LENGTH=2086
Length=2086
Score = 1423 bits (770), Expect = 0.0
Identities = 1171/1366 (86%), Gaps = 22/1366 (2%)
Strand=Plus/Plus
Query 368 GAGAAGTAACAAGCCGAAGATCGTCAACGGTC-CTGGTGGTTATATTCTTCAAGACGTTC 426
||| |||| ||| ||||||||| |||| || | || |||||||| |||| |||| || |
Sbjct 330 GAG-AGTAGCAAACCGAAGATCATCAATGG-CTCTTGTGGTTATGTTCTAGAAGATGTAC 387
Query 427 CTCATCTCAT-TGATTATCTTCCTGATCTTCCTACTTATCCGAATCCATTGCAAGACAAT 485
| |||||| | ||||| ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 388 CGCATCTC-TCCGATTACCTTCCTGGTCTTCCTACTTATCCTAATCCATTGCAAGACAAT 446
Query 486 CCAGCTTACTCAGTGGTTAAGCAATACTTTGTTGATGCAGATGATAGTGTCCCTGAGAAG 545
|||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| | |||
Sbjct 447 CCAGCTTACTCAGTGGTTAAGCAATACTTTGTTGATGCTGATGACAGTGTTCCTCAAAAG 506
Query 546 GTTGTTGTTCACAAGGATGGTCCAAGAGGAATCCATTTCAGGCGCGCTGGTCCACGTCAA 605
| ||||||||||||||||||||||| || || ||||| || || || || ||||||||
Sbjct 507 ATCGTTGTTCACAAGGATGGTCCAAGGGGGATTCATTTTAGACGAGCCGGGCCACGTCAG 566
Query 606 AAGGTTTACTTTGAGTCTGATGAAGTGCATGCTTGCATAGTTACATGTGGAGGTCTCTGT 665
||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 567 AAGGTATACTTCGAATCTGATGAAGTGCATGCTTGCATAGTTACCTGTGGAGGTCTTTGT 626
Query 666 CCCGGTCTCAATACCGTCATTAGAGAAATTGTGAGCAG-CTTATCATACATGTATGGAGT 724
|| || || |||||||| ||||||||||| |||||||| || ||| || |||||||||||
Sbjct 627 CCTGGCCTTAATACCGTGATTAGAGAAATAGTGAGCAGTCT-ATCTTATATGTATGGAGT 685
Query 725 GAAGAGAATCCTTGGAATCGATGGTGGATACAGAGGATTCTACGCCAAGAATACTATCCC 784
||||||||| || ||||| ||||||||||| ||||| || || || ||||||||| || |
Sbjct 686 GAAGAGAATACTGGGAATAGATGGTGGATATAGAGGCTTTTATGCTAAGAATACTGTCTC 745
Query 785 CTTAAACTCTAAAGTCGTGAATGATATCCATAAGCGCGGAGGAACCATTCTCGGGACCTC 844
||| |||||||||| || ||||||||||||||||| ||||| || || || ||||||||
Sbjct 746 CTTGGACTCTAAAGTTGTAAATGATATCCATAAGCGTGGAGGGACTATCCTTGGGACCTC 805
Query 845 AAGAGGTGGACACGATACCACGAAGATAGTTGATAGCATTCAAGATCGAGGAATTAATCA 904
| ||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct 806 ACGAGGTGGTCACGATACCACAAAGATAGTTGACAGCATTCAAGATCGAGGAATCAATCA 865
Query 905 GGTTTACATTATTGGAGGAGATGGAACCCAGAGAGGTGCTTCAGTAATATTTGAGGAAAT 964
|||||||||||| |||||||||||||| ||| |||| || || || ||||||||||||||
Sbjct 866 GGTTTACATTATAGGAGGAGATGGAACACAGCGAGGAGCATCTGTCATATTTGAGGAAAT 925
Query 965 TAGAAGACGTGGACTTAAAGTTGCTGTGGTTGGAATTCCGAAAACTATTGATAATGATAT 1024
|||||||||||| || |||||||| || ||||||| |||||||| || |||||||| ||
Sbjct 926 TAGAAGACGTGGCCTGAAAGTTGCAGTTATTGGAATCCCGAAAACAATCGATAATGACAT 985
Query 1025 TCCTGTAATAGACAAATCTTTTGGGTTTGACACTGCTGTGGAGGAAGCTCAACGAGCAAT 1084
||||| |||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct 986 ACCTGTGATAGACAAATCTTTTGGGTTTGACACTGCTGTAGAAGAGGCTCAACGAGCTAT 1045
Query 1085 TAACGCAGCACATGTCGAAGCTGAGAGCA-ATGAGAATGGTATCGGTTTTGTCAAGCTTA 1143
||| ||||||||||| ||||| ||||| | | |||||||||||||| ||||||||||||
Sbjct 1046 TAATGCAGCACATGTGGAAGCCGAGAGTATA-GAGAATGGTATCGGAGTTGTCAAGCTTA 1104
Query 1144 TGGGTCGTTACAGCGGGTTCATAGCGATGTATGCTACAT-TAGCCAGCAGAGATGTTGAC 1202
||||||| |||||||||||||||||||||||||| || | |||| ||||||||||| |||
Sbjct 1105 TGGGTCGCTACAGCGGGTTCATAGCGATGTATGCCAC-TCTAGCAAGCAGAGATGTGGAC 1163
Query 1203 TGTTGCTTGATTCCTGAGTCACCATTTTACCTCGAAGGAGAAGGTGGACTCTTTGAGTTC 1262
|| || |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||| |
Sbjct 1164 TGCTGTTTGATTCCGGAGTCACCATTTTACCTGGAAGGAGAAGGCGGACTGTTTGAGTAC 1223
Query 1263 GTAGAGAGACGGCTCAAGGAGCAT-GGTCACATGGTGATTGTTCTTGCTGAAGGTGCAGG 1321
|||||| ||| ||||||||| | ||||||||||| |||| |||| |||||||||||
Sbjct 1224 ATAGAGAAACGACTCAAGGAG-AGCGGTCACATGGTTCTTGTGATTGCAGAAGGTGCAGG 1282
Query 1322 ACAGGATTTGATGTGCAAA-AGCATGGAATCTA---CTCTTAAGGATGCTTCTGGGAACA 1377
||| ||| | |||| | || ||||||||||||| | || || ||||| ||||| ||||
Sbjct 1283 ACAAGATCTAATGT-CGAAGAGCATGGAATCTATGACACTCAAAGATGCATCTGGTAACA 1341
Query 1378 AACTTCTTAAAGATGTCGGC-TTGTGGCTATCACAAAGCATCAAGGTTTATTTTAATAAG 1436
|||||||||||||||| ||| || ||||| |||||||||||||||| | |||||||| ||
Sbjct 1342 AACTTCTTAAAGATGTTGGCCTT-TGGCTGTCACAAAGCATCAAGGATCATTTTAATCAG 1400
Query 1437 AATAAGATGGTGATGAATCTCAAATACATTGATCCTACATACATGATCCGGGCTGTTCCA 1496
|| |||||||||||||| ||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct 1401 AAGAAGATGGTGATGAACCTCAAGTACATAGATCCAACATACATGATTCGAGCTGTTCCT 1460
Query 1497 AGTAATGCATCAGACAATGTTTACTGTACACTTCTTGCTCAGAGCGCGGTTCATGGTGCA 1556
|| ||||| |||||||||||||| ||||||||||| |||||||| || || || ||||||
Sbjct 1461 AGCAATGCGTCAGACAATGTTTATTGTACACTTCTGGCTCAGAGTGCAGTGCACGGTGCA 1520
Query 1557 ATGGCTGGTTACACTGGCTACACCAGTGGTCTTGTCAATGGAAGACAAACATACAT-CCC 1615
|||||||| ||||||||||| | ||||||||| || || ||||||||||| ||||| |||
Sbjct 1521 ATGGCTGGATACACTGGCTATATCAGTGGTCTAGTGAACGGAAGACAAACCTACATACCC 1580
Query 1616 TTACTACAGGATAACAGAGACGCAGAACAATGTAGTAATTACGGATAGAATGTGGGCGAG 1675
|| ||||||||||| |||| |||||| |||| || || || || || |||||||| ||
Sbjct 1581 TTT-TACAGGATAACGGAGAAACAGAACCATGTGGTGATCACAGACAGGATGTGGGCAAG 1639
Query 1676 GTTATTGTCTTCTACGAACCAGCCAAGTTTCTTGGGGCCTAAGGAT 1721
| || | ||||| || |||||||| ||||||||||| || || |||
Sbjct 1640 GCTACTCTCTTCGACAAACCAGCCGAGTTTCTTGGGCCCCAAAGAT 1685
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99848884005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5