BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495825 Length=1781 Score E Sequences producing significant alignments: (Bits) Value AT5G57270.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylg... 2538 0.0 AT4G25870.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylg... 856 0.0 > AT5G57270.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr5:23200614-23203792 REVERSE LENGTH=1907 Length=1907 Score = 2538 bits (1374), Expect = 0.0 Identities = 1659/1790 (93%), Gaps = 46/1790 (3%) Strand=Plus/Plus Query 1 TCGATTTCTTTATTTCTAAGCAAAGAGAGAGAAAACAAATCGAGGATCTGAATCGTCAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37 TCGATTTCTTTATTTCTAAGCAAAGAGAGAGAAAACAAATCGAGGATCTGAATCGTCAAA 96 Query 61 AAC--TAC----TTTTGTATGTTCTTCATTGA-AACACATTAATATAATTATTGCAAAAG 113 || ||| |||||||||||||||||| | |||||||||||||| ||||| |||||| Sbjct 97 CACTTTACTTTGTTTTGTATGTTCTTCATT-ACAACACATTAATATACTTATTCCAAAAG 155 Query 114 CCaaaaaaaaaaaTCTAACAC--TCTCATTATCTTTCTCTTGACTCTTTGATGTAAAGAA 171 | ||| |||||| ||||| |||| ||||||||||||| |||||||||| ||||||| Sbjct 156 -C---AAACAAAATCCAACACTGTCTCGTTATCTTTCTCTTCACTCTTTGATATAAAGAA 211 Query 172 GAAGATCATCAAAGCTTTCATTTTTGAGATCTGGGCTTCAGACAAAGATTC---tttttt 228 | ||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct 212 G--GATCATCAAAGCTTTCA-TTTTGAGATCTGGGC-TCAGACAAAGATTCTTTTTTTTT 267 Query 229 t-ttCTCTCCCCAGCTCCAAATTCTCAGGT-AA-CTGTAATAACTCTCGTACGTGCGGGT 285 | ||||||||||||||||||||||||| || || | |||| |||||||||||| |||| Sbjct 268 TATTCTCTCCCCAGCTCCAAATTCTCA-GTGAAGC-ATAATTGCTCTCGTACGTGGGGGT 325 Query 286 TTTGCTCAATGTAAAGAAGTTAAAGATTCAACCATTTTATGGGAGAA--ACACAGAACCT 343 ||||||||||||||||||||||||||||||| | |||| | | || | |||| || Sbjct 326 TTTGCTCAATGTAAAGAAGTTAAAGATTCAAAC-TTTTTTTTCACAATGGGAGAGAATCT 384 Query 344 GCATTTGTCTCCGCGACACCGATCTTCTCTAAAGAAGCCATTGTTGATTGTTTTGTTAGT 403 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 385 GCATTTGTCTCCACGACACCGATCTTCTCTAAAGAAGCCATTGTTGATTGTTTTGTTAGT 444 Query 404 CTGTATCACAAGTGTGCTTTTGGTGATCACTTACATGTATCCACAGCACAATG---GTAA 460 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 445 CTGTATCACAAGTGTGCTTTTGGTGATCACTTACATGTATCCACAACACAACAACAGTAA 504 Query 461 CAGCTCTGCGTGTGCGGGTTTGTCTAGTAGAGGCTGTGAAGCGGCGCTTTCGGGATGGCT 520 |||||||| ||||||||||||||||||||||||||| |||| ||||| || |||||||| Sbjct 505 GAGCTCTGCTTGTGCGGGTTTGTCTAGTAGAGGCTGTCAAGCTGCGCTCTCTGGATGGCT 564 Query 521 TCCTGTTCATGTGAGGAAATTTACGGATGAAGAAGTAGCAGCTCGAGTTGTGATCAAAGA 580 |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 565 TCCTGTTCATGTCAGGAAATTCACTGATGAAGAAGTAGCAGCTCGAGTTGTGATCAAAGA 624 Query 581 TATTCTGAGACTACCTCCTGCTCTAACCGCTAAATCGAAAATCGCTTTTATGTTCTTGAC 640 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 625 TATACTGAGACTACCTCCTGCTCTAACCGCTAAATCGAAAATCGCTTTTATGTTTTTGAC 684 Query 641 TCCTGGTACTTTGCCATTTGAGAAGCTTTGGGATAAGTTTTTCCAGGGTCAAGAAGGAAG 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 685 TCCTGGTACTTTGCCATTTGAGAAGCTTTGGGATAAGTTTTTCCAGGGTCAAGAAGGAAG 744 Query 701 ATTCTCTATTTACATCCACCCATCAAGGTTACGACCAGTTCACATTAGCCGTCACTTTTC 760 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 745 ATTCTCTATTTACATCCACCCTTCCAGGTTACGACCAGTTCACATTAGCCGTCACTTTTC 804 Query 761 AGACCGTGAGATTCACAGCGATCATGTCACTTGGGGAAGGATTTCTATGGTTGATGCCGA 820 ||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct 805 AGACCGTGAAATTCATAGTGATCATGTCACTTGGGGAAGGATTTCTATGGTTGATGCTGA 864 Query 821 GAAACGGCTTCTAGCAAACGCTCTTGAAGATCCTGACAACCAACACTTTGTTCTTCTTTC 880 || ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| Sbjct 865 GAGACGGCTTCTAGCAAATGCTCTTGAAGATCCTGATAACCAGCACTTTGTTCTTCTTTC 924 Query 881 AGAAAGTTGTATACCGTTGCATACATTTGACTATACCTATCGATATTTGATGCACGCAAA 940 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 925 AGAAAGTTGTATACCGTTGCATACATTTGACTACACCTATCGATATTTGATGCACGCAAA 984 Query 941 TGTCAGCTTCATTGATAGTTTTGAGGATCTTGGTCCTCACGGGACTGGCAGACACATGGA 1000 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 985 TGTCAGCTTCATTGATAGTTTTGAGGATCTTGGTCCTCATGGGACTGGCAGACACATGGA 1044 Query 1001 TCACATGTTACCTGAGATCCCAAGGCAAGATTTCAGAAAGGGTGCACAGTGGTTCACAAT 1060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1045 TCACATGTTACCTGAGATCCCAAGGCAAGATTTCAGAAAGGGTGCACAGTGGTTCACAAT 1104 Query 1061 GAAGCGTCAGCACGCTGTAATAGTGATGGCTGATGGTCTCTACTACTCGAAATTCCGGGA 1120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1105 GAAGCGTCAACACGCTGTAATAGTGATGGCTGATGGTCTCTACTACTCGAAATTCCGGGA 1164 Query 1121 GTATTGCAGACCCGGGGTAGAAGCAAACAAGAACTGCATCGCAGATGAACATTACCTGCC 1180 |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1165 GTATTGCAGACCTGGAGTAGAAGCAAACAAGAACTGCATCGCGGATGAACATTACCTGCC 1224 Query 1181 AACATTCTTCCATATGCTTGATCCTGGAGGAATCTCGAACTGGTCAGTCACATATGTTGA 1240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1225 AACATTCTTTCATATGCTTGATCCTGGAGGAATCTCGAACTGGTCAGTCACATATGTTGA 1284 Query 1241 TTGGTCTGAGCGTAGATGGCATCCAAAGACATACAGAGCACGCGATGTCTCACTCAAGCT 1300 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1285 TTGGTCTGAGCGTAGATGGCATCCAAAGACATATAGAGCACGCGATGTCTCACTCAAGCT 1344 Query 1301 CTTGAAAAATATCACGTCCGATGACATGAGTGTACATGTAACAAGCGTTGGCAAGCGCGG 1360 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1345 CTTGAAAAATATCACGTCTGACGACATGAGTGTACATGTAACAAGCGTTGGCAAGCGCGG 1404 Query 1361 AGAAGAGCTGCATTGGCCTTGTACATGGAAGGGAATTAGACGTCCATGTTATCTATTCGC 1420 ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1405 AGAAGAGCTGCGTTGGCCTTGTACATGGAAGGGAATTAGACGACCATGTTATCTATTTGC 1464 Query 1421 AAGGAAGTTTCACTCAGATGCTCTTTACAAACTGGTCAGACTCTTTCCAAACTACACGAG 1480 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1465 AAGGAAGCTTCACTCAGATGCTCTTTACAAACTGGTCAGACTCTTTCCAAATTACACAAG 1524 Query 1481 CTCAGTGGTCTGAGCCAGAAACAAATTCTTGAAACCAAACCATACAATTCTTGAAACCGG 1540 | ||||||||| ||||||| ||||||||||||||| ||||||||| |||||||||||||| Sbjct 1525 CACAGTGGTCTAAGCCAGAGACAAATTCTTGAAACTAAACCATACGATTCTTGAAACCGG 1584 Query 1541 AACAAAACACTTCCACATAT-CTCGAGATTGGATCGCAGATT-ACTGTAAATTTCTGCTT 1598 ||| ||||||||||| |||| | ||||||||||||||| ||| ||||||||||| ||||| Sbjct 1585 AACTAAACACTTCCAGATATGC-CGAGATTGGATCGCA-ATTTACTGTAAATTTTTGCTT 1642 Query 1599 TCTCTTGCTGGGGTTTAGTG-CTCTTTAATGGGACATGTTACTCTGCTTTTATTAAGGTT 1657 |||||||||| | ||||||| ||||||| |||| |||||| |||||||||||||| Sbjct 1643 TCTCTTGCTGAGATTTAGTGTCTCTTTA------CATGGTACTCTACTTTTATTAAGGTT 1696 Query 1658 TAGTATAAGAACAAAATTAGAAGCAGAGGTTTTT-G-TCTAAGGAGAGTTTTGGTTTTTG 1715 ||||||||||| ||| ||||||||||| ||||| | || |||||||| ||||||| | | Sbjct 1697 TAGTATAAGAAGAAAGTTAGAAGCAGAAATTTTTTGGTC-AAGGAGAGATTTGGTTATCG 1755 Query 1716 TGATTTTAGCCATTGTTTGGTTAGTGTTAACCGGTGTATGTTGTTGTAAA 1765 ||||||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1756 TGATTTTAGCCATTGTTCGGTTAGTGTTAAGCGGTATATGTTGTTGTAAA 1805 > AT4G25870.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr4:13149691-13152277 REVERSE LENGTH=1513 Length=1513 Score = 856 bits (463), Expect = 0.0 Identities = 855/1039 (82%), Gaps = 48/1039 (5%) Strand=Plus/Plus Query 516 TGGCTTCCTGTTCATGTGAGGAAATTTACGGATGAAGAAG-TAGCAGCTCGAGTTGTGAT 574 ||||| ||||||||||| |||||||| || |||| || || |||||||||||| ||| | Sbjct 396 TGGCTACCTGTTCATGTCAGGAAATTCACTGATG-AGGAGATAGCAGCTCGAGCAGTGGT 454 Query 575 CAAAGATATTCTGAG-ACTACCT-CCTGCTC-TAACCGCTAAATCGAAAATCGCTTT-TA 630 | ||| || || || || ||| ||| || ||||| ||| || ||||||||||| | Sbjct 455 TAGAGACATACTAAGAAC-GCCTCCCT--TCATAACCAATAACTCCAAAATCGCTTTCT- 510 Query 631 TGTTCTTGACTCCTGGTACTTTGCCATTTGAGAAGCTTTGGGAT-AAGTTTTTCCAGGGT 689 ||||||||||||| ||||||||||||||||||||||| |||||| || |||||| ||||| Sbjct 511 TGTTCTTGACTCCCGGTACTTTGCCATTTGAGAAGCTCTGGGATGAA-TTTTTCAAGGGT 569 Query 690 CAAGAA-GGAAGATTCTCTATTTACATCCACCCATC-AAGGTTACGACCAGTTCACATTA 747 || ||| |||| |||||| || || |||||||| || |||| ||||||||||||||| | Sbjct 570 CATGAAGGGAA-ATTCTCGATATATATCCACCCGTCAAAGG-AACGACCAGTTCACATCA 627 Query 748 GCCGTCACTTTTCAGACCGTGAGATTCACAGCGATCATGTCACTTGGGGAAGGATTTCTA 807 ||||||||||||| || || ||||||||||| ||| | || ||||||||||||||||||| Sbjct 628 GCCGTCACTTTTCTGATCGAGAGATTCACAGTGATGAGGTTACTTGGGGAAGGATTTCTA 687 Query 808 TGGTTGATGCCGAGAAACGGCTT-CTAGCAAACGCTCTTGAAGATCCTGACAACCAACAC 866 |||||||||| ||||| ||| || || | | |||||||||||||||||||||||||||| Sbjct 688 TGGTTGATGCTGAGAAGCGG-TTACTGGTTAGCGCTCTTGAAGATCCTGACAACCAACAC 746 Query 867 TTTGTTCTTCTTTCAGAAAGTTGTATACCGTTGCATACATTTGACTATACCTATCGATAT 926 ||||||||| ||||||| |||||||| ||||||||||| |||||||| || ||| ||||| Sbjct 747 TTTGTTCTTGTTTCAGAGAGTTGTATTCCGTTGCATACTTTTGACTACACTTATAGATAT 806 Query 927 TTGATGCACGCAAATGTCAGCTTCATTGATAGTTTTGAGGATCTTGGTCCTCACGGGACT 986 ||| || || | || || ||||||||||| ||||||| ||||| ||||| || || || Sbjct 807 TTGTTGTACTCCAACGTTAGCTTCATTGAGAGTTTTGTGGATCCGGGTCCACATGGAACC 866 Query 987 GGCAGACACATGGATCACATGTTACCTGAGATC-CCAAGGCAAGATTTCAGAAAGGGTGC 1045 || ||||| ||||| ||||||||||| || ||| |||||| ||||||| ||||||||||| Sbjct 867 GGTAGACATATGGAACACATGTTACCAGAAATCGCCAAGG-AAGATTTTAGAAAGGGTGC 925 Query 1046 ACAGTGGTTCACAATGAAGCGTCAGCACGCTG-TAATAGTGATGGCTGATGGTCTCTACT 1104 |||||||||||||||||||| || ||||| | | ||||||||||| |||||||| |||| Sbjct 926 TCAGTGGTTCACAATGAAGCGACAACACGC-GATTATAGTGATGGCCGATGGTCTTTACT 984 Query 1105 ACTCGAAATTCCGGGAGTATTGCAGACCCGGGGTAGAAGCAAACAAGAACTGCATCGCAG 1164 |||| |||||||| |||||||| |||| || |||| || ||||||||||||| || | Sbjct 985 ACTCAAAATTCCGCGAGTATTGTGGACCTGGAATAGAGGCCGACAAGAACTGCATTGCCG 1044 Query 1165 ATGAACATTACCTGCCAACATTCTTCCATATGCTTGATCC--TGGAGGAATCTCGAACTG 1222 ||||||||||| |||||||||||||| ||||| ||||||| ||| ||| |||| || || Sbjct 1045 ATGAACATTACTTGCCAACATTCTTCAATATGATTGATCCCATGG-GGA-TCTCAAATTG 1102 Query 1223 GTCAGTCACATATGTTGATTGGTCTGAGCGTAGATGGCATCCAAAGACATACAGAGCA-- 1280 |||||| || | ||||||||||||||| || || |||||||||||||||||| ||| | Sbjct 1103 GTCAGTGACGTTTGTTGATTGGTCTGAACGAAGGTGGCATCCAAAGACATACGGAGGAAA 1162 Query 1281 CGCGATGTCTCACTC-AAGCTCTTGAAAAATATCACGTCCGATGACATGAGTGTACATGT 1339 || ||| | ||| | || | | ||||||| |||| ||||| ||||||||||||||||| Sbjct 1163 CGAGAT-T-TCATTAGAATTTAT-GAAAAATGTCACATCCGAGGACATGAGTGTACATGT 1219 Query 1340 AACAAGCGTTGGCAAGCGCGGAGAAGAGCTGCATTGGCCTTGTACATGGAA-GGGAATTA 1398 || || || || |||| ||||| |||||||||||||||||||||||||| |||| ||| Sbjct 1220 CACCAGTGTGGGGAAGCATGGAGATGAGCTGCATTGGCCTTGTACATGGAACGGGA-TTA 1278 Query 1399 GACGTCCATGTTATCTATTCGCAAGGAAGTTTCACTCA-GATGCTCTTTACAAACTGGTC 1457 ||| || || |||||||| ||||| ||||| || || ||| |||| ||| | ||||| Sbjct 1279 AACGGCCTTGCTATCTATTTGCAAGAAAGTTCCA-TCCTGATACTCTCGACACATTGGTC 1337 Query 1458 AGAC-TCTTTCCAAACTACACGAGCTCAG-TGGTCTGAGCCAGAAACAAATTCTTGAAAC 1515 | || |||| ||||||||||| | | ||| || |||||| ||| | |||||||| | Sbjct 1338 A-ACCTCTTCCCAAACTACACAAACACAGCTG-TCTGAG--AGAGG-A--TTCTTGAA-C 1389 Query 1516 CAAAC-CATACAATTCTTG 1533 ||||| || ||| |||||| Sbjct 1390 CAAACACACACA-TTCTTG 1407 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88101956475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5