BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495887 Length=2916 Score E Sequences producing significant alignments: (Bits) Value AT5G57870.1 | Symbols: eIFiso4G1 | MIF4G domain-containing prot... 4625 0.0 AT1G62410.1 | Symbols: | MIF4G domain-containing protein | chr... 254 5e-66 > AT5G57870.1 | Symbols: eIFiso4G1 | MIF4G domain-containing protein / MA3 domain-containing protein | chr5:23439500-23443781 FORWARD LENGTH=2946 Length=2946 Score = 4625 bits (2504), Expect = 0.0 Identities = 2808/2947 (95%), Gaps = 52/2947 (2%) Strand=Plus/Plus Query 1 ACCCTAATAAAGAGAAGGGATTGTGtctccttctcgacttcttcttcttcct-tc--ttc 57 |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct 7 ACCCTAATAAAGAGAAGGGATTGTGTCTCCTTCTCGACTTCTTCTTCTTCTTCTCATTTC 66 Query 58 tcaatctcaac---t-t-ttctc-t-tc-tctt--ct--------gagagagagagaCCC 99 ||||||||||| | | ||||| | || |||| || ||||||||||||||| Sbjct 67 TCAATCTCAACTTTTCTCTTCTCTTCTCTTCTTCGCTAACGGCAGGAGAGAGAGAGACCC 126 Query 100 AGGAAGCCGATCCCTCCTCTCCTTCGATTATCGGATTCAGCGATTCATCGTCGCTGATAA 159 || || |||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 127 AGAAATCCGATCCCTCCTCTCCTTGGATTATCGGAGTCAGCGATTCATCGTCGCTGATAA 186 Query 160 AGCTTCTACCTTTCTCTTCCCTCTCGTCGATTTTTGTTGTGAGATTCGATTCGATC-T-A 217 |||||||| | || || |||| |||||||||||||||||||||||||||||| | | Sbjct 187 AGCTTCTA-C---CT-TT--CTCT--TCGATTTTTGTTGTGAGATTCGATTCGATCTTAA 237 Query 218 GGCGGATTAGATCGAGGTATGCAGCAAGGCGATCAAACGGTGCTGAGCTTGAGACCTGGT 277 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 238 GGCGGATTAGATCGAGGTATGCAGCAAGGCGATCAAACGGTTCTGAGCTTGAGACCTGGT 297 Query 278 GGCGGTCGAGGAAACAGACTTTTTGGttcctcttcttcttcttcgtctctctcttttggc 337 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 298 GGCGGTCGAGGAAACAGACTATTTGGTTCCTCTTCTTCTTCTTCGTCTCTCTCTTTTGGC 357 Query 338 tctctttcatcttcggatctacctctccttcgtcctcATGGTGGTGCTCCTGCTTCCTCT 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TCTCTTTCATCTTCGGATCTACCTCTCCTTCGTCCTCATGGTGGTGCTCCTGCTTCCTCT 417 Query 398 TTTCCCTTCAAGGGTGGAGACTCGAGGTTTGATGGCCGTGAACGTGTGAAGTACACCCGT 457 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 418 TTTCCCTTCAAGGGTGGAGACTCGAGGTTCGATGGCCGTGAACGTGTGAAGTACACCCGT 477 Query 458 GAGCAGCTTCTGGAACTTAAAGAGATCACTCAACTCTCTGATGAAATTCTGAGAGTCCAA 517 |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 478 GAGCAGCTCCTGGAGCTTAAAGAGACCACTCAACTCTCTGATGAAATTCTGAGAGTCCAA 537 Query 518 CGGGAAACTGCAACAGAACTGTTTGGTGAGGAAGGGACTTGGGCACGTGGGGAAAGTGTC 577 |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 538 CGGGAAACTGCAGCTGAACTGTTTGGTGAGGAAGGGACTTGGGCACGTGGAGAAAGTGTC 597 Query 578 GTAAGCAATTTGGTTCCGGTTCAATCCGCAAGTCGCTTCTCTGAGCCAGACTCTCGCGAT 637 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 598 GTAAGCAATTTGGTTCCCGTTCAATCCGCAAGTCGCTTCTCTGAGCCAGACTCTCGTGAT 657 Query 638 TGGCGTAGCCGTTCTACTCAACCTCCACCTTCTGGAGAGGAAAGGTCGTGGGATAATCTC 697 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 658 TGGCGTAGCCGTTCTACTCAACCTCCACCCTCTGGGGAGGAAAGGTCGTGGGATAATCTT 717 Query 698 CGTGAAGCTAGAGATTCCAGGTATGTTGAAGCAAGCCAATATAATCGTCAAGACCAACCT 757 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 718 CGTGAAGCTAAAGATTCCAGGTATGTTGAAGCAAGTCAATATAATCGTCAAGACCAACCT 777 Query 758 AATTCCCAGTTTTCAAGGGCAAACATATCATCCAACCAAGGGGGTGGACCAGCTCCTGTC 817 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 AATTCCCAGTTTTCAAGGGCAAACATATCATCCAACCAAGGGGGTGGACCAGCTCCTGTC 837 Query 818 CTCGTCAAAGCCGAAGTGCCTTGGTCAGCTAGAAGAGGAAACCTTTCTGAAAATGATCGA 877 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 838 CTCGTCAAAGCCGAAGTTCCTTGGTCAGCTAGAAGAGGAAACCTTTCTGAAAATGATCGT 897 Query 878 GTTCTGAAGACTGTGAAAGGGATACTGAACAAGCTAACCCCTGAAAAGTATGACCTTCTT 937 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 GTTCTGAAGACTGTGAAAGGGATACTGAACAAGCTAACCCCTGAAAAGTATGACCTTCTC 957 Query 938 AAGGGCCAACTTATTGAATCTGGCATCACATCTGCTGATATCCTGAAGGGTGTGATTACC 997 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 AAGGGCCAACTTATTGAATCTGGCATCACATCTGCTGATATCCTGAAGGGTGTGATTACC 1017 Query 998 CTTATTTTTGACAAAGCTGTCCTTGAGCCGACCTTTTGCCCTATGTACGCAAAATTGTGC 1057 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1018 CTTATTTTTGACAAAGCTGTCCTTGAGCCGACCTTTTGCCCTATGTATGCAAAATTGTGC 1077 Query 1058 TCTGATATCAACAACAAGCTGCCCACCTTCCCACCTGCAGAGCCTGGGGATAAGGAGATT 1117 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 TCTGATATCAACGACCAGCTGCCCACCTTCCCACCTGCAGAGCCTGGGGATAAGGAGATT 1137 Query 1118 ACATTTAAGAGGGTTCTACTGAATATCTGTCAAGAGGCATTTGAGGGCGCTTCCCAGTTG 1177 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1138 ACATTTAAGAGGGTTCTACTGAATATCTGTCAAGAGGCATTTGAGGGCGCTTCTCAGTTG 1197 Query 1178 AGGGAGGAGCTTAGACAGATGAGTGCTCCAGATCAGGAGGCTGAGCGGAATGACAAAGAA 1237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 AGGGAGGAGCTTAGACAGATGAGTGCTCCAGATCAGGAGGCTGAGCGGAATGACAAAGAA 1257 Query 1238 AAATTGTTGAAGCTCAAGACTCTAGGAAATATTCGTTTGATTGGTGAGCTTTTAAAGCAG 1297 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1258 AAATTGTTGAAGCTCAAGACTCTAGGAAATATTCGTTTGATTGGTGAGCTTTTGAAGCAG 1317 Query 1298 AAGATGGTTCCAGAAAAGATTGTTCATCACATTGTAAAGGAGCTTCTTGGGGCCGATGAG 1357 |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 1318 AAGATGGTCCCAGAAAAGATTGTTCATCACATTGTTCAGGAGCTTCTGGGGGCCGATGAG 1377 Query 1358 AAAGTTTGTCCAGCAGAGGAAAATGTCGAAGCTATTTGTCATTTCTTCAAAACAATTGGC 1417 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1378 AAAGTTTGTCCAGCCGAGGAAAATGTCGAAGCTATTTGTCATTTCTTCAAAACTATTGGC 1437 Query 1418 AAACAACTTGACGGAAACGTGAAGTCAAAACGGATTAATGATGTATATTTCAAACGCCTA 1477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 AAACAACTTGACGGAAACGTGAAGTCAAAACGGATTAATGATGTATATTTCAAACGCCTA 1497 Query 1478 CAGGATCTGTCAAAGAATCCTCAGTTGGAACTGCGTCTGAGATTCATGGTTCAGAATATC 1537 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1498 CAGGCTCTGTCAAAGAATCCTCAGTTGGAACTGCGTCTGAGATTCATGGTTCAGAATATC 1557 Query 1538 ATCGACATGCGCTCCAATGGCTGGGTTCCAAGGCGGGAAGAGATGAAAGCAAGAACTATA 1597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 ATCGACATGCGCTCCAATGGCTGGGTTCCAAGGCGGGAAGAGATGAAAGCAAGAACTATA 1617 Query 1598 ACCGAAATCCATACTGAGGCAGAGAAGAATCTTGGTCTCCGACCAGGTGCCACTGCAAAT 1657 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 ACCGAAATACATACTGAGGCAGAGAAGAATCTTGGTCTCCGACCAGGTGCCACTGCAAAT 1677 Query 1658 ATGAGAAGGGGTATGGTTTCTAGTGGTGGGCCTGTGAGCCCTGGCCCTGTCTACCCTGGT 1717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 ATGAGAAGGGGTATGGTTTCTAGTGGTGGGCCTGTGAGCCCTGGCCCTGTCTACCCTGGT 1737 Query 1718 GGGCGACCTGGTGCGGGTGGCTTGATGCCTGGTATGCCTGGGACGCGAAGGATGCCTGGG 1777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1738 GGGCGACCTGGTGCGGGTGGCTTGATGCCTGGTATGCCTGGGACGCGAAGGATGCCTGGG 1797 Query 1778 ATGCCCGGGGTTGACAATGATAACTGGGAGGTACCCCGGACAAGATCAATGTCTAGACGT 1837 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 ATGCCCGGAGTGGACAATGATAACTGGGAGGTACCCCGGACAAGATCAATGTCTAGACGC 1857 Query 1838 GATGGGCCAGGACCTCTGCATTCTCCAGCAGTGAGCAAGTCGGCCTCAATGAACACGAGG 1897 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1858 GATGGGCCAGGACCTCTACATTCTCCAGCAGTGAGCAAGTCGGCCTCAATGAACACGAGG 1917 Query 1898 CTCTTACCTCAAGGCAGCAGCGGCATTATGAGTGGCAAGACAAGCGCACTGTTGCAGGGA 1957 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1918 CTCTTACCTCAAGGCAGCAGTGGCATTATGAGTGGCAAGACAAGCGCACTGTTGCAGGGA 1977 Query 1958 AGCGGTTCAGTGTCCCGCCCAGTTACCGTGTCAGCAGTACCGCCAGCACAGTCAGCTGCA 2017 || ||||||||||| || ||||||||||||||||||| || |||||||||||||| |||| Sbjct 1978 AGTGGTTCAGTGTCGCGTCCAGTTACCGTGTCAGCAGAACGGCCAGCACAGTCAGTTGCA 2037 Query 2018 CCTCTGACCGTACCAGTACCGGTGGAGAAACCACAGCCTAGTGCTCCCAAGTTGAGCGAA 2077 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 2038 CCTCTGACCGTACCAGTTCCGGTGGAGAAACCACAGCCTAGTGGTCCCAAGTTGAGCGAA 2097 Query 2078 GAAGTGCTCCAAAGAAAAACAAAGTCACTTCTCGAGGAATATTTCAATGTCCGACTTCGT 2137 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | Sbjct 2098 GAAGTGCTCCAAAGAAAAACAAAGTCGCTTCTCGAGGAATATTTCAATGTCCGACTACTT 2157 Query 2138 GATGAAGCTCTGCAGTGTGTAGAGGAGCTTGGGTCT-CCTTCATATCATCCAGAGTTTGT 2196 | |||||||||||||||||||||||||||||| | | || |||||||| ||||||||||| Sbjct 2158 GGTGAAGCTCTGCAGTGTGTAGAGGAGCTTGGTT-TGCCGTCATATCACCCAGAGTTTGT 2216 Query 2197 GAAGGAAGCAATATCCCTGTCCCTTGAGAAAAGCCCGCCTGTCGTCGAGCCAATTGCTG- 2255 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 2217 GAAGGAAGCAATATCCCTGTCTCTTGAGAAAAGCCCGCCTGTCGTTGAGCCAATTGCTAC 2276 Query 2256 ATCTCTTGGAGTATTTGTTATCAAAGAAGGTACTCACACCCAAGGATCTTGAAACCGGGT 2315 | |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| Sbjct 2277 A-CTCTTGGAGTATTTGTTATCAAAGAAGGTAGTCGCACCCAAGGATCTTGAAACTGGGT 2335 Query 2316 TCTTGCTCTATGGTGCTATGCTGGACGACATTGGAATTGATCTTCCTAAGGCACCAAACA 2375 |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2336 TCTTGCTCTACGGTGCTATGTTGGACGACATTGGAATTGATCTTCCTAAGGCACCAAACA 2395 Query 2376 ACTTTGGTGAGATTGTGGGAAAGCTGATTCTGGCTGGTGGTGTGGATTTCAAGTTGGTTA 2435 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2396 ATTTTGGTGAGATTGTGGGAAAGCTGATTCTGGCTGGTGGTGTGGATTTCAAATTGGTTA 2455 Query 2436 GAGAAATTATAGGGAAGATGGAAGACGATAGGTTCCAGAAGATGGTGGCCAATGCAGCTC 2495 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2456 GAGAAATTATAGGGAAGATGGAAGACGATAGGTTCCAGAAGATGGTGGTCGATGCAGCTG 2515 Query 2496 TACGCATCGTGGAGTCGAGTGAGCAGGGGAAGTCCCTGTTGGCCTCACAGGCAGCAGACG 2555 ||||||| |||||||| || ||||||||||||||| |||||||||||||||| |||||| Sbjct 2516 TACGCATTGTGGAGTCAAGCGAGCAGGGGAAGTCCTTGTTGGCCTCACAGGCTGCAGACA 2575 Query 2556 TAGAGGCTTGTCGGAATCTGTAAAAGGAATCATTGCTTTACGATTTTGCTCTCTCTGGGT 2615 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 2576 TAGAGGCTTGTCGGAATCTGTAAAAGGAATCATTACTTGACGATTTTGCTCTCTCTGGGT 2635 Query 2616 CTTATGCTTGTGCGATGAATGTTGTGTTGTAAGCTTGAAGGAGGAGGAGAAGAGGATTCT 2675 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2636 CTTATGCTTGTGCGATGAATGTTGTGTTGTAAGCTTGAAGGAGGAGGAGAAAAGGATTCT 2695 Query 2676 CAGAACTCAAAAATAGTTTTGCTCTTCTTTGAAGCTTTTG-TTATGACATTATTCTCACC 2734 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2696 CAGAACTCAAAAATAGTTTTGCTCTTCGTTGAAGCTTTTTCTTATGACATTATTCTCACC 2755 Query 2735 ACTCTTGTTTGTGGGGATGTGTCCTTGTCcttttttgtattcttctgagacttctctttt 2794 |||||| |||||||| ||| |||| |||||||||||||||||||||| ||||| |||||| Sbjct 2756 ACTCTTCTTTGTGGGCATGAGTCCATGTCCTTTTTTGTATTCTTCTGTGACTTGTCTTTT 2815 Query 2795 ctatttttttgacctttgcatttttgttttACGGTCTCAGTTATT-----CAGTTGATTG 2849 | || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2816 -T-TT-----GACCTTTGCATTTTTGTTTTACGGTCTCAGTTATTATATTCAGTTGATTG 2868 Query 2850 TTGTTGAGACTTTGAGACCCCTATAAACTTGGTCGGTTCAGATAAATTACATTGGAAATG 2909 |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct 2869 TTGTTGAGACTT-GAGACCCCTATAAACT-GGTCGGTTCAGATAA-TTACATTGGAAATG 2925 Query 2910 TTTGATC 2916 ||||||| Sbjct 2926 TTTGATC 2932 > AT1G62410.1 | Symbols: | MIF4G domain-containing protein | chr1:23092915-23093869 FORWARD LENGTH=672 Length=672 Score = 254 bits (137), Expect = 5e-66 Identities = 438/579 (76%), Gaps = 38/579 (7%) Strand=Plus/Plus Query 995 ACCCTTATTTTTGACAAAGCTGTCCTTGAGCCGACCTTTTGCCCTATGTACGCAAAATTG 1054 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 43 ACCCTTATTTTCGACAAAGCAGTCCTTGAGCCGACCTTTTGCCCTATGTACGCTCAATTG 102 Query 1055 TGCTCTGATATCAACAACAAGCTGCCCACCTTCCCACCTGCAGAGCCTGGGGA-TAAGGA 1113 |||| ||||||| | |||| |||| | || |||||| ||| |||| | | | | || Sbjct 103 TGCTTTGATATCCGCCACAAAATGCCTAGGTTTCCACCTTCAGCGCCTAAG-ACTGATGA 161 Query 1114 GAT-TACATTTAAGAGGGTTCTACTGAATATC-TGTCAAGAGGCATTTGAGGGCGCTTCC 1171 ||| | |||| ||||||||| | ||||| | | |||||| ||| |||||| | || | Sbjct 162 GATCT-CATTCAAGAGGGTTTTGCTGAACA-CATGTCAAAAGGTGTTTGAGAGAACTGAC 219 Query 1172 CAGTTGAGGGAGGAGCTTAGACAGATGAGTGCTCCAGATCAGGAGGCTGAGCGG-AATGA 1230 | || || |||||| ||||| |||||| || |||||||||||||| || ||| || || Sbjct 220 GACTTAAGTGAGGAGATTAGAAAGATGAACGCGCCAGATCAGGAGGCCGAACGGGAA-GA 278 Query 1231 CAAAGAAAAATTGTTGAAGCTCAAGACTCTAGGAAATATTCGTTTGAT-TGGTGAGCTTT 1289 | ||| || | ||||||| ||| ||||||||||||| ||||||| | ||||||||||| Sbjct 279 CGAAGTAAGACTGTTGAACCTCCGGACTCTAGGAAATCTTCGTTTT-TGTGGTGAGCTTT 337 Query 1290 TAAAGCAGAAGATGGTTC-CAGAAAAGATTGTTC-ATCACATTG-TAAAGGAGCTTCTTG 1346 | | || |||| || |||||||| ||||| | | ||||| | | | ||||| ||| Sbjct 338 TTTTGAAGCGGATG-TTGACAGAAAAGGTTGTTTTAGC-CATTGGTCA-GAAGCTT-TTG 393 Query 1347 G-GGCCGATGAG-AAAGTTTGTCCAGCAGAGGAAAATGTCGA-AGCTATTTGTCA-TTTC 1402 | || | |||| ||| | |||||| |||||||||| | | ||||||||||| |||| Sbjct 394 GAGGATGCTGAGCAAA-TGTGTCCATCAGAGGAAAAAATT-ATAGCTATTTGTCTCTTTC 451 Query 1403 TTCAAAACAATTGGCAAACAA-CTTGACGGAAACGTGAAGTCAAAACGGATTAATGATGT 1461 | ||| || |||||||| || ||||| | |||| ||||||| ||| || || | Sbjct 452 T-CAACACTGTTGGCAAA-AAGCTTGATTCAT---TGAACTCAAAACTGATGAACGA-G- 504 Query 1462 ATATTTCAA-ACGCCTACAGGATCTGTCAAAGAATCCTCAGTTGGA-ACTGCGTCTGA-G 1518 || ||| || ||| || || |||||||||| ||||||| |||| | || | || | | Sbjct 505 AT-TTT-AAGACGTTTAAAGAATCTGTCAAATCATCCTCAATTGGTTA-TGAG-CTTAAG 560 Query 1519 ATTCATGGTTCAGAATATCATCGACATGCGCTCCAATGG 1557 ||| |||||| ||| |||||| | ||| ||||| ||| Sbjct 561 ATTAATGGTTGGGAAGATCATCCATTTGCACTCCATTGG 599 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 144932298327 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5