BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg495935 Length=828 Score E Sequences producing significant alignments: (Bits) Value AT5G58260.1 | Symbols: | oxidoreductases, acting on NADH or NA... 1175 0.0 > AT5G58260.1 | Symbols: | oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor | chr5:23560876-23561944 REVERSE LENGTH=844 Length=844 Score = 1175 bits (636), Expect = 0.0 Identities = 768/832 (92%), Gaps = 7/832 (1%) Strand=Plus/Plus Query 1 ATTGTTAGTGAAGAAATGGGAAGCCGTGCCGTATGTATACAACGTGTGGCGCCGCCGTGT 60 ||||||||| ||||||||||||||||||| ||||||||||||||||||| || |||||| Sbjct 1 ATTGTTAGTAAAGAAATGGGAAGCCGTGCAATATGTATACAACGTGTGGCACCACCGTGT 60 Query 61 TTTGAAGCTTCGCAAGTGAAGAAGATCAAAACTGTTGGTCCCTTTTTTGTGAATACTAGG 120 |||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||| Sbjct 61 TTTGAAGCCTCGCAAGTGAAGAAGATCAAAACAGTTGGTTCCTTTTTGGTGAATACTAGG 120 Query 121 AGTAAGAGAAGAAGAAGCAATGGCGT-AAGATGTAGCAGCATAGCTGACTATATCGGAGG 179 ||||||||||||||||||| ||| || || ||||||||||||||||||||| |||||||| Sbjct 121 AGTAAGAGAAGAAGAAGCACTGGTGTGAA-ATGTAGCAGCATAGCTGACTACATCGGAGG 179 Query 180 TGACCTGGTGAAGCCGGACATCGGACAATGGCTTCAAGATGTGGAAGAGCACAAGGCAAT 239 |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 180 TGACTTGGTGAAGCCGGACATCGGACAATGGCTTCAAGACGTGGAAGAACACAAGGCAAT 239 Query 240 CGCCATTTACGCTCCTCATGAGGGTGGTTACGAAGGTCGTTATCTTAACCGTCTCAAAAT 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CGCCATTTACGCTCCTCATGAGGGTGGTTACGAAGGTCGTTATCTTAACCGTCTCAAAAT 299 Query 300 GCAAGGCTACTACTTTCTTGACATCTCTGCTCGGGGCCTGGGTGACCCTGAGACTACTCT 359 ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || Sbjct 300 GCAGGGCTACTACTTTCTTGACATCTCTGCTCGTGGCCTTGGTGACCCTGAGACTACCCT 359 Query 360 CCTCAAGAACTACCCTGTTTGCCCTGCTCATCTTGGCAAACAACCTATAGCAAGATGGTA 419 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 360 TCTCAAGAACTACCCTGTTTGCCCTGCTCATCTTGGGAAACAACCTATAGCAAGATGGTA 419 Query 420 CTATCCACCAGAGGTTGATTACAGGCTCTCTGCTCTTCCCCCTAGTGCCAAAGGTCTTGT 479 ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 420 TTATCCACCAGAAGTTGATTACAGGCTCGCTGCTCTTCCCCCTAGTGCCAAGGGTCTTGT 479 Query 480 CGTATGGGTCCTCGAAGCAAAGGTCCTCTCCAAGGCTGAACTCCAATTTCTCGCTTTGCT 539 ||||||||||||||||||||||||||||| || | || || |||||||||||||| || Sbjct 480 TGTATGGGTCCTCGAAGCAAAGGTCCTCTCAAAATCGGAGCTTCAATTTCTCGCTTTACT 539 Query 540 TCCCTCTCTTCGTCCTAATGTCCGGGTTATTGCTGAATGTGGCAACTGGAGAAAGTTTGT 599 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || Sbjct 540 TCCCTCTCTTCGTCCTAACGTCAGGGTTATTGCTGAATGTGGCAACTGGAGAAAGTTCGT 599 Query 600 GTGGAAGCCTCTAGCAGAAATTGCAAATTTAGCTGCACAAGAGTAACCTAATGGCACCAG 659 |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || Sbjct 600 GTGGAAGCCTCTAGCAGAAATTGCAAATCTAGCTGCACAAGAGTAACTTAATGGCACAAG 659 Query 660 TAGAACTTACC-GTGTATAGTTTT-CATGAATACATCTTCTGCAAGTGTAGCAATACTCA 717 | || || ||| |||||||||||| ||||||| ||||| | ||||||||||||||||||| Sbjct 660 TGGAGCT-ACCAGTGTATAGTTTTTCATGAATGCATCTCCCGCAAGTGTAGCAATACTCA 718 Query 718 TCACATATTAAAATTTGAAATATATGTTTGTTACTTGGTAATATATTCCCATGGAGTAAT 777 || |||| ||||| || |||| | | ||||| |||||||| ||||||||||||||||| | Sbjct 719 TCCCATAGTAAAAGTTAAAATCTGTATTTGTAACTTGGTAGTATATTCCCATGGAGTAGT 778 Query 778 TAAGGACAATTTCTGACTCTGCTTTGTCACAAATGAAAGTACT-TATAATCA 828 ||| || ||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 779 TAAAGATAATTTCTGACTCTGCTTTGTCACAAATAAAAGTA-TGTATAATCA 829 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40338020041 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5