BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496059 Length=510 Score E Sequences producing significant alignments: (Bits) Value AT5G59320.1 | Symbols: LTP3 | lipid transfer protein 3 | chr5:2... 732 0.0 AT5G59310.1 | Symbols: LTP4 | lipid transfer protein 4 | chr5:2... 514 3e-145 AT5G59330.1 | Symbols: | Bifunctional inhibitor/lipid-transfer... 315 4e-85 > AT5G59320.1 | Symbols: LTP3 | lipid transfer protein 3 | chr5:23928971-23929745 FORWARD LENGTH=681 Length=681 Score = 732 bits (396), Expect = 0.0 Identities = 455/484 (94%), Gaps = 2/484 (0%) Strand=Plus/Plus Query 1 CATATCCACCAACAAAAACACAAGCTTATAAAGCAAAAATCAACTAATTTTGTTATCAAC 60 |||||||| ||||||||||| ||||| | ||| | ||| ||||||||||||||||||| | Sbjct 1 CATATCCAACAACAAAAACATAAGCTAAGAAAACGAAACTCAACTAATTTTGTTATCACC 60 Query 61 CAACAAGAAGAACAAACACAATGGCTTTCGCTTTGAGGTTCTTCACATGCCTTGTTTTAA 120 ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAAAAAGAAGTTCAAACACAATGGCTTTCGCTTTGAGGTTCTTCACATGCCTTGTTTTAA 120 Query 121 CGGTGTGCATAGTTGCATCAGTCGATGCTGCAATCTCATGTGGCACAGTGGCAGGTAGCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGGTGTGCATAGTTGCATCAGTCGATGCTGCAATCTCATGTGGCACAGTGGCAGGTAGCT 180 Query 181 TGGCTCCATGTGCAACCTACCTATCAAAAGGTGGGTTGGTGCCACCTCCGTGTTGTGCAG 240 ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| Sbjct 181 TGGCTCCATGTGCAACCTATCTATCAAAAGGTGGGTTGGTGCCACCTTCATGTTGTGCAG 240 Query 241 GAGTCAAAAAGTTGAACGGTATGGCTCAAACCACACCAGACCGCCAACAAGCATGCCGAT 300 ||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||| ||| Sbjct 241 GAGTCAAAACTTTGAACAGTATGGCTAAAACCACACCAGACCGCCAACAAGCTTGCAGAT 300 Query 301 GCATACAGTCCACTGCGAAGAGCATTTCTGGTCTCAACCCAAGTCTAGCCTCTGGCCTTC 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCATCCAGTCCACTGCGAAGAGCATTTCTGGTCTCAACCCAAGTCTAGCCTCTGGCCTTC 360 Query 361 CTGGAAAGTGCGGTGTTAGCATTCCCTATCCCATCTCCATGAGCACTAACTGCAACAACA 420 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 361 CTGGAAAGTGCGGTGTTAGCATTCCATATCCAATCTCCATGAGCACTAACTGCAACAACA 420 Query 421 TCAAGTGAAATGGAAGCTTACGTCATCATTT-G-CGTTAAGAGTATGGTTTAACATAAGT 478 |||||||||||||||||||||||| || ||| | |||||||||||||||||| || |||| Sbjct 421 TCAAGTGAAATGGAAGCTTACGTCGTCGTTTTGGCGTTAAGAGTATGGTTTACCAGAAGT 480 Query 479 ACTA 482 |||| Sbjct 481 ACTA 484 > AT5G59310.1 | Symbols: LTP4 | lipid transfer protein 4 | chr5:23925085-23925852 REVERSE LENGTH=630 Length=630 Score = 514 bits (278), Expect = 3e-145 Identities = 409/470 (87%), Gaps = 17/470 (4%) Strand=Plus/Plus Query 4 ATCCACCAACAAAAACACAAGCTTATAAAGCAAAAATCAACTAATTTTGTTATCAACCAA 63 ||||| |||| ||||||||||| || ||| ||||| |||||||||| |||||||| |||| Sbjct 4 ATCCAACAAC-AAAACACAAGCGTAGAAAACAAAACTCAACTAATTGTGTTATCACCCAA 62 Query 64 CA-AGAAGAACAAACACAATGGCTTTCGCTTTGAGGTTCTTCACATGCCTTGTTTTAACG 122 | |||||| |||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 63 AAGAGAAGAGCAAACACAATGGCTTTCGCTTTGAGGTTCTTCACATGCTTTGTTTTGACA 122 Query 123 GTGTGCATAGTTGCATCAGTCGATGCTGCAATCTCATGTGGCACAGTGGCAGGTAGCTTG 182 |||| ||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct 123 GTGTTCATCGTTGCATCAGTGGATGCAGCAATAACATGTGGCACAGTGGCAAGTAGCTTG 182 Query 183 -GCTCCATGTGC-AACCTACCTATCAAAAGGTGGGTTGGTGCCACCTCCGTGTTGTGCAG 240 | ||||||| | | |||||||||||| |||||| |||||||||||||||| ||||||| Sbjct 183 AG-TCCATGT-CTAGGCTACCTATCAAAGGGTGGGGTGGTGCCACCTCCGTGCTGTGCAG 240 Query 241 GAGTCAAAAAGTTGAACGGTATGGCTCAAACCACACCAGACCGCCAACAAGCATGCCGAT 300 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 241 GAGTCAAAAAGTTGAACGGTATGGCTCAAACCACACCCGACCGCCAACAAGCATGCAGAT 300 Query 301 GCATACAGTCCACTGCGAAGAGCATTTCTGGTCTCAACCCAAGTCTAGCCTCTGGCCTTC 360 || |||||||| |||| || || ||| | || |||||||||||||||||||||| Sbjct 301 GCTTACAGTCCGCTGCAAA-AGG------GGT-T-AATCCAAGTCTAGCCTCTGGCCTTC 351 Query 361 CTGGAAAGTGCGGTGTTAGCATTCCCTATCCCATCTCCATGAGCACTAACTGCAACAACA 420 |||||||||||||||||||||| |||||||||||||||| |||||| |||||| || || Sbjct 352 CTGGAAAGTGCGGTGTTAGCATCCCCTATCCCATCTCCACGAGCACCAACTGCGCCACCA 411 Query 421 TCAAGTGAAATGGAAGCTTA-CGTCATCATTTGCGTTAAGAGTATGGTTT 469 ||||||||| ||| | || || |||||||||| | ||||||||||||| Sbjct 412 TCAAGTGAAGTGGG-GAATAACGACATCATTTGCCTGAAGAGTATGGTTT 460 > AT5G59330.1 | Symbols: | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr5:23931318-23931889 FORWARD LENGTH=424 Length=424 Score = 315 bits (170), Expect = 4e-85 Identities = 320/387 (83%), Gaps = 32/387 (8%) Strand=Plus/Plus Query 49 TTTGTTATCAACC--AACAAGA-AGAACAAACACAATGGCTTTCGCTTTGAGGTTCTTCA 105 ||||| || |||| ||||| | ||| |||||||||||||||| ||| | |||||||||| Sbjct 63 TTTGTAAT-AACCAAAACAAAATAGAGCAAACACAATGGCTTTGGCTCTCAGGTTCTTCA 121 Query 106 CATGCCTT-GTTTTAACGGTGTGCATAGTTGCATCAGTCGATGCTGCAATCTCATGTGGC 164 ||| ||| ||||| ||||||||||||||| ||||||| ||||| | ||||||||||||| Sbjct 122 TATG-CTTCGTTTTGACGGTGTGCATAGTTTCATCAGTAGATGCAGAAATCTCATGTGGC 180 Query 165 ACAGTGGCAGGTAGCTTGGCTCCATGTG-CAACCTACCTATCAAAAGGTGGGT-TGGTGC 222 ||||||| | ||| |||||||||||||| ||| |||||| ||||||||| ||| |||| | Sbjct 181 ACAGTGGTAAGTAACTTGGCTCCATGTGCCAA-CTACCTTTCAAAAGGT-GGTGTGGTAC 238 Query 223 CACCTCCGTGTTGTGCAGGAGTCAAAAAGTTGAACGGTATGGCTCAAACCACACCAGACC 282 | || |||||||| |||||| |||||||||||||| ||||| | | Sbjct 239 CGGATCTGTGTTGTGAAGGAGTTGAAAAGTTGAACGGTGTGGCT----------C--A-- 284 Query 283 GCCAACAAGCATGCCGATGCATACAGTCCACTGCGAAGAGCATTTCTGGTCTCAACCCAA 342 ||| ||||||||||| ||||||||| ||| ||| ||||||||||||||||||||| Sbjct 285 ---AAC---CATGCCGATGCCTACAGTCCATTGCAAAGGGCATTTCTGGTCTCAACCCAA 338 Query 343 GTCTAGCCTCTGGCCTTCCTGGAA-AGTGCGGTGTTAGCATTCCCTATCCCATCTCCATG 401 ||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||| || Sbjct 339 GTCTAGCCTCTGGTCTTCCTG-AAGAGTGCGGTGTTAGCATTCCCTATCCCATTTCCTTG 397 Query 402 AGCACTAACTGCAACAACATCAAGTGA 428 |||||||||||| ||||| || ||||| Sbjct 398 AGCACTAACTGCGACAACGTCGAGTGA 424 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24363561295 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5