BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496352 Length=1497 Score E Sequences producing significant alignments: (Bits) Value AT5G61840.1 | Symbols: GUT1 | Exostosin family protein | chr5:2... 2296 0.0 > AT5G61840.1 | Symbols: GUT1 | Exostosin family protein | chr5:24839178-24841940 REVERSE LENGTH=1672 Length=1672 Score = 2296 bits (1243), Expect = 0.0 Identities = 1438/1526 (94%), Gaps = 38/1526 (2%) Strand=Plus/Plus Query 1 ACTTCTTCTTCCGACGTTCCAGCTGTTCTAGTTGATCTTTATATAC-TTATATGATCTGG 59 ||| ||||||| ||| || ||||||||||||||||||||||||||| ||||||||||| | Sbjct 130 ACTACTTCTTCTGACATTTCAGCTGTTCTAGTTGATCTTTATATACTTTATATGATCT-G 188 Query 60 GGATTTTGAAGA--TTTTAGGGAGG-------------G-GA-AGAAAAATGAAGTTATC 102 |||||||||||| ||||||||||| | || ||||||||||||||||| Sbjct 189 GGATTTTGAAGAGTTTTTAGGGAGGAACCAAAATTTCTGAGAGAGAAAAATGAAGTTATC 248 Query 103 GAGCTGGGTTTTGATCTTCCTTCTTTGTAACCTCACCTTCCTCTCGACGATTTCTGCTTT 162 |||||| ||||||||||||||||| ||||| ||| || ||| | ||||||||||||| Sbjct 249 GAGCTGCGTTTTGATCTTCCTTCTATGTAA---CACATT-CTC-C-TCGATTTCTGCTTT 302 Query 163 CCGTCTGAGTCGGAGTCAACCAACTGAGCGAATTTCAGGTAGTGCTGGTGATGTGTTGGA 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 CCGTCTGAGTCGGAGTCAACCAACTGAGCGAATTTCAGGTAGTGCTGGTGATGTGTTGGA 362 Query 223 GGATAATCCTGTGGGAAGACTGAAAGTCTTTGTTTATGAGCTTCCAAGTAAATACAACAA 282 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 AGATGATCCCGTGGGAAGACTGAAAGTCTTTGTTTATGAGCTTCCAAGTAAATACAACAA 422 Query 283 GAAGATACTTCACAAGGACCCGAGGTGTCTAAACCATATGTTTGCTGCTGAGATATATAT 342 |||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 423 GAAGATACTTCAGAAGGATCCGAGATGTCTAAACCACATGTTTGCTGCTGAGATATATAT 482 Query 343 GCAACGGTTTCTTTTATCCAGCCCAGTTCGAACACTTAATCCCGAGGAAGCTGATTGGTT 402 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 483 GCAACGGTTTCTTTTATCTAGCCCAGTTCGAACACTTAATCCCGAGGAAGCTGATTGGTT 542 Query 403 TTACGTCCCTGTGTATACCACTTGTGATCTCACGCCTAATGGGCTTCCTCTTCCTTTTAA 462 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 543 CTACGTACCTGTGTACACCACTTGTGATCTCACGCCTAATGGGCTTCCTCTTCCTTTTAA 602 Query 463 ATCTCCACGGATGATGAGAAGTGCCATTCAGCTTATTGCTTCCAACTGGCCATACTGGAA 522 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 603 ATCTCCACGAATGATGAGAAGTGCCATTCAGCTTATTGCTTCCAATTGGCCATACTGGAA 662 Query 523 TCGCACAGAAGGAGCAGACCACTTCTTTGTCGTGCCTCATGACTTTGGAGCCTGTTTCCA 582 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 663 TCGCACAGAAGGAGCAGACCACTTCTTTGTTGTGCCTCATGACTTTGGAGCCTGTTTCCA 722 Query 583 TTATCAAGAAGAGAAGGCAATAGGAAGAGGAATACTACCCTTGCTTCAACGGGCTACACT 642 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 723 TTATCAAGAAGAGAAGGCAATAGGAAGAGGAATACTACCCTTGCTTCAACGAGCTACACT 782 Query 643 GGTGCAGACATTTGGACAAAGGAATCATGTTTGCTTGAAGGAGGGTTCAATCACTGTTCC 702 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 783 GGTGCAGACATTTGGACAAAGGAATCATGTTTGCTTGAAAGAAGGTTCAATCACTGTTCC 842 Query 703 TCCATATGCTCCACCACAGAAGATGCAGTCACACTTAATTCCTGAGAAAACTCCTCGATC 762 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 843 TCCATATGCTCCACCACAGAAGATGCAGTCACACTTAATTCCCGAAAAAACTCCTCGATC 902 Query 763 CATCTTCGTTTATTTCAGAGGATTGTTTTATGATGTGGGAAATGACCCTGAGGGTGGCTA 822 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 903 CATCTTCGTTTATTTCAGAGGATTGTTTTATGATGTGGGAAATGACCCTGAGGGTGGTTA 962 Query 823 TTATGCAAGGGGTGCACGAGCAGCTGTATGGGAAAACTTCAAAGACAATCCGCTGTTCGA 882 |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 963 TTATGCGAGGGGTGCAAGAGCAGCTGTATGGGAAAACTTCAAAGACAATCCGCTGTTTGA 1022 Query 883 CATCTCAACAGAGCACCCAACAACATATTATGAGGACATGCAGAGAGCAATCTTCTGCTT 942 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1023 CATCTCAACAGAGCACCCAACAACATATTATGAGGACATGCAGAGAGCAATCTTCTGCCT 1082 Query 943 ATGCCCACTTGGATGGGCACCATGGAGTCCAAGACTGGTGGAAGCTGTGATCTTTGGTTG 1002 |||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||| Sbjct 1083 ATGCCCACTTGGATGGGCCCCATGGAGTCCAAGACTGGTGGAAGCAGTGATATTCGGTTG 1142 Query 1003 CATCCCTGTGATCATAGCAGATGACATCGTGTTACCTTTTGCAGATGCGATCCCTTGGGA 1062 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 1143 CATCCCTGTGATCATAGCAGACGACATCGTGTTACCTTTTGCAGATGCAATCCCTTGGGA 1202 Query 1063 AGATATTGGTGTGTTTGTGGATGAGAAAGATGTTCCTTACCTGGACACAATACTCACATC 1122 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1203 AGATATTGGTGTGTTTGTGGATGAGAAAGATGTCCCTTACCTGGACACAATACTCACATC 1262 Query 1123 GATCCCTCCAGAAGTTATACTGAGAAAACAGAGGTTGTTGGCAAATCCGTCGATGAAACA 1182 |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1263 GATCCCACCAGAGGTTATACTGAGAAAACAGAGGTTGTTGGCAAACCCGTCGATGAAACA 1322 Query 1183 AGCCATGCTGTTTCCGCAACCGGCTCAACCAGGGGATGCGTTTCATCAAGTGTTGAATGG 1242 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1323 AGCCATGCTGTTCCCGCAACCGGCTCAACCAGGGGATGCGTTTCATCAAGTATTGAATGG 1382 Query 1243 GTTGGCTCGTAAGCTGCCTCATGAGAGGAGTGTGTATCTGAGACCAGGTGAGAAGCTGTT 1302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1383 GTTGGCTCGTAAGCTGCCTCATGAGAGGAGTGTGTATCTGAGACCAGGTGAGAAGCTGTT 1442 Query 1303 GAACTGGACGGCAGGACCGGTGGCTGATCTGAAACCTTGGTAAGGACCAGTGTTGGAATT 1362 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1443 GAACTGGACGGCAGGACCGGTCGCTGATCTGAAACCTTGGTAAGGACCAGTGTTGGAATT 1502 Query 1363 TGATTGAAGGATCCTATTG---G-TTGGTT-CTGT-T----GTGTCTGTATTTTGTAGAA 1412 |||||||| || | ||||| | |||||| |||| | ||||||||||||||||||| Sbjct 1503 TGATTGAATGAGC-TATTGTTTGGTTGGTTTCTGTCTTCTCGTGTCTGTATTTTGTAGAA 1561 Query 1413 TCATAACCtttttttGCTATGTAGAAGGGAAAAAGCTT-GATCATTGTAATGAAACTAGA 1471 ||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||| Sbjct 1562 TCATAACTTTTTTTTGCTATGTAGAAGGGAAAAAGCTTTG-TCATTGTAATGTAACTAGA 1620 Query 1472 ATCCTTTTGACATCTCACGAGAGAGA 1497 |||||||||||||||||||||| ||| Sbjct 1621 ATCCTTTTGACATCTCACGAGAAAGA 1646 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73845001695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5