BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496413 Length=591 Score E Sequences producing significant alignments: (Bits) Value AT5G62360.1 | Symbols: | Plant invertase/pectin methylesterase... 822 0.0 > AT5G62360.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr5:25040649-25041462 FORWARD LENGTH=814 Length=814 Score = 822 bits (445), Expect = 0.0 Identities = 561/613 (92%), Gaps = 23/613 (4%) Strand=Plus/Plus Query 1 ATGGGTGAATCTTTTA-A--ATTCAACCATCATCACTTCCTCACGTCTCTTCTCGTAATC 57 |||||||||||||||| | |||||| ||||||||||||||||| || ||||| ||||| Sbjct 51 ATGGGTGAATCTTTTAGATTATTCAATCATCATCACTTCCTCACAACTTTTCTCATAATC 110 Query 58 ATAGCCATTCTCAAATCGG-T--T-------------C-A-Tacaacaacaacaacaaac 99 |||||||| ||||||| || | | | | ||||||||||||||||||| Sbjct 111 ATAGCCATGCTCAAATTGGTTCATACAACAACAACAACAACTACAACAACAACAACAAAC 170 Query 100 aCCGAGTTCGTAAAATCATCATGCACTTTCACAACGTACCCAAGACTCTGTTTCTCTTCA 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 ACCGAGTTCGTAAAATCATCATGCACTTTCACAACGTACCCAAGACTCTGTTTCTCTTCA 230 Query 160 CTCTCAACTCATGCCAGTCTCATCCAAACAAGCCCCAAGCTCATGGCTCACGCGGCTCTC 219 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 231 CTCTCAACTCATGCTAGTCTCATCCAAACAAGCCCCAAGCTCATGGCTCATGCGGCTCTC 290 Query 220 AACATAACATTAGCCTCTGCTAAAGCAACTTCAGCAATGATGGTGCGTCTGTCAAATAGT 279 ||||| ||||||||||| ||||||| |||||||||||||||||||||||| || |||||| Sbjct 291 AACATCACATTAGCCTCGGCTAAAGTAACTTCAGCAATGATGGTGCGTCTCTCGAATAGT 350 Query 280 CGGCTCAAGCC-AAGAGAAGTCTCGGCCATGAGAGACTGCGTCGAGGAGTTAGGTGACTC 338 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 351 CGGCTCAAGCCTAA-AGAAGTCTCGGCCATGAGAGACTGCGTCGAGGAGTTAGGTGACAC 409 Query 339 GTTGGAGGAGCTTAGAAAATCGATTGGTGAGATGTGTCGGCTAAGTGGCTCGAACTATGA 398 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 410 GTTGGAGGAGCTTAGGAAATCGATTGGTGAGATGTGTCAGCTAAGTGGCTCGAACTATGA 469 Query 399 GGTCTACATGAGCGATATACAGACTTGGGTCAGTGCGGCTTTGACAGATGTGAACACATG 458 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 470 AGTTTACATAAGCGATATACAGACTTGGGTCAGTGCGGCTTTGACAGATGTGAACACATG 529 Query 459 TACGGATGGATTTGAAGGAGACGACATGAATGGGAAGGTTAAGGTTTTGGTTAGAGGGAG 518 ||| || |||||||||||||| || ||| | ||||||||||||||||||||||||||||| Sbjct 530 TACTGACGGATTTGAAGGAGAAGATATGGACGGGAAGGTTAAGGTTTTGGTTAGAGGGAG 589 Query 519 AATTTTGGTTATTGCTCATTTAACGAGTAATGCTTTGGCTTTGATTAATCACTTTGCTTC 578 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 590 GATTTTGGTTATTGCTCATTTAACAAGTAATGCTTTAGCTTTGATTAATCACTTTGCTTC 649 Query 579 TATTCATGGCTAA 591 ||||||||||||| Sbjct 650 TATTCATGGCTAA 662 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28432527202 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5