BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496423 Length=1221 Score E Sequences producing significant alignments: (Bits) Value AT5G62470.2 | Symbols: MYB96 | myb domain protein 96 | chr5:250... 1777 0.0 AT3G47600.1 | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain p... 538 5e-152 AT1G08810.1 | Symbols: MYB60, AtMYB60 | myb domain protein 60 |... 291 1e-77 > AT5G62470.2 | Symbols: MYB96 | myb domain protein 96 | chr5:25078991-25081101 REVERSE LENGTH=1745 Length=1745 Score = 1777 bits (962), Expect = 0.0 Identities = 1176/1269 (93%), Gaps = 55/1269 (4%) Strand=Plus/Plus Query 1 ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGACCATGGACACCAGAG 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 244 ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGGCCATGGACACCAGAG 303 Query 61 GAAGACATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 GAAGACATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTC 363 Query 121 CCAACTA-ACACAGGTTT--G-AGATGTAGCAAGAGCTGCAGATTGAGATGGACTAATTA 176 ||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 364 CCAAC-ACACACAGGTTTGAGAAGATGTAGCAAGAGCTGCAGATTGAGATGGACTAATTA 422 Query 177 TCTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACTATTGTTCA 236 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 423 TCTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACAATTGTTCA 482 Query 237 TCTTCAAGCCCTTTTAGGCAACAGATGGGCAGCCATAGCATCATACCTTCCAGAAAGGAC 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 TCTTCAAGCCCTTTTAGGCAACAGATGGGCAGCCATAGCATCATACCTTCCAGAAAGGAC 542 Query 297 AGACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAGAAGGTTAA 356 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 543 AGACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAAAAGATTAA 602 Query 357 TGAATCTGGTGAAGAAGATAATGATGGTGTCTCCTCATCAAACACTAGCTCACAAAAGAA 416 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 603 TGAATCTGGTGAAGAAGATAATGATGGTGTCTCTTCATCAAACACTAGTTCACAAAAGAA 662 Query 417 CCATCAAAGCACTAACAAAGGTCAATGGGAAAGAAGACTTCAGACAGATATTAACATGGC 476 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 663 CCATCAAAGCACTAACAAAGGTCAATGGGAAAGAAGACTTCAGACAGACATTAACATGGC 722 Query 477 AAAACAAGCTCTTTGTGAGGCCTTGTCTTTAGACAAA-C--CAT-CA-----TCATCA-- 525 ||||||||||||||||||||||||||||||||||||| | ||| || |||||| Sbjct 723 AAAACAAGCTCTTTGTGAGGCCTTGTCTTTAGACAAACCATCATCCACTCTTTCATCATC 782 Query 526 -TCATCGTTGCCGACACCAGTAATCACGCAACAAAACATCCATAGCTTCTCATCAGCTTT 584 ||||| || ||||||||||||||||| ||||||||||||| || ||||||||||||||| Sbjct 783 TTCATCATTACCGACACCAGTAATCACACAACAAAACATCCGTAACTTCTCATCAGCTTT 842 Query 585 GCTTGACCGTTGTTATGATCCATCCTCTTCTTCTTCCTCTACAACCACAACTACGACTAC 644 |||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||| Sbjct 843 GCTTGACCGTTGTTATGATCCATCCTCTTCTTCTTCATCT---ACCACAACCACCACTAC 899 Query 645 AAGCAATACTACCAATCCACACCCATCAGGTGTATATGCGTCAAGTGCTGAGAACATCGC 704 |||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 900 AAGCAACACTACTAATCCATACCCATCAGGGGTATATGCGTCAAGTGCTGAGAACATCGC 959 Query 705 TCGGTTGCTTCAAGATTTCATGAAAGACACACCAAAGGCTTTAACTTTATTATCTTCATC 764 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 960 CCGGTTGCTTCAAGATTTCATGAAAGACACACCCAAGGCTTTAACTTTATCATCTTCATC 1019 Query 765 TCCAGTTTCAGAGACCGGACCACTCGCTGCTGCAGTCTCGGAAGAAGGTGCAGAAGGGTT 824 ||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 1020 TCCGGTTTCAGAGACTGGACCACTCACTGCTGCAGTCTCGGAAGAAGGTGGAGAAGGGTT 1079 Query 825 TGAACAATCTTTCTTCAGCTTCAATTCAATGGAAGAAACTCAAAACTTGACTCAGGCGAC 884 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1080 TGAACAATCTTTCTTCAGCTTCAATTCAATGGACGAAACTCAAAACTTGACTCAGGAGAC 1139 Query 885 AAGCTTCTTCCATGATCAAGAGATCAAACCGGAAATAATAATGGACCAAGATCATGGTTT 944 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| | Sbjct 1140 AAGCTTCTTCCATGATCAAGTGATCAAACCGGAAATAACAATGGACCAAGATCATGGTCT 1199 Query 945 AATATCACAAGGGTCTCTGTCTTTGTTGGAGAAATGGTTATTTGATGAGCAAAGCCACGA 1004 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1200 AATATCACAAGGGTCTCTGTCTTTGTTTGAGAAATGGTTATTTGATGAGCAAAGCCACGA 1259 Query 1005 GATGGTTGGTATGGTGGCACTAGAAGGACAAGAAGGGATGTTCTAGTTCT---AGA---- 1057 ||||||||||| ||||||||| |||||||||||||||||||||||||| ||| Sbjct 1260 GATGGTTGGTA---TGGCACTAGCAGGACAAGAAGGGATGTTCTAGTTCTAGAAGACTGT 1316 Query 1058 --AG-----AC---------T-TTTTT-AAGTTGAGGGCTTAATTAGTTATGAGTTATAA 1099 || || | ||||| || ||||||||||||||||||||||||||||| Sbjct 1317 CTAGAACTAACAAAGTGGGATCTTTTTAAAATTGAGGGCTTAATTAGTTATGAGTTATAA 1376 Query 1100 CAAATAATATAGAGTTATAACCTAT-AT------GCTTATTATTGCATTAGGGTTTTAGA 1152 ||||||||||||||||||||||||| || |||||||||||| ||||||||||||| Sbjct 1377 CAAATAATATAGAGTTATAACCTATGATATATATGCTTATTATTGCTTTAGGGTTTTAGA 1436 Query 1153 GTCTTTAGTAGCTAGCTTTTAGCTCTACAACACTCTTTTTCCCTTTTGGTGATATAAATA 1212 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1437 GTCTTTAGTAGCTAGCTTTTAGCTCTACAACACTCTTTTCCCCTTTTGGTGATATAAATC 1496 Query 1213 TCTCTCTTT 1221 ||||| ||| Sbjct 1497 TCTCTTTTT 1505 > AT3G47600.1 | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain protein 94 | chr3:17539338-17541230 REVERSE LENGTH=1486 Length=1486 Score = 538 bits (291), Expect = 5e-152 Identities = 465/544 (85%), Gaps = 32/544 (6%) Strand=Plus/Plus Query 1 ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGACCATGGACACCAGAG 60 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 196 ATGGGAAGACCACCATGCTGTGACAAGATTGGAGTGAAGAAAGGACCATGGACACCAGAG 255 Query 61 GAAGACATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTC 120 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 GAAGATATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTG 315 Query 121 CCAACTAACACAGGTTTGAG-A--TGTAGCAAGAGCTGCAGATTGAGATGGACTAATTAT 177 || ||| ||||||||||||| | |||||||| ||||| |||||||| |||||||||||| Sbjct 316 CCTACTCACACAGGTTTGAGGAGATGTAGCAAAAGCTGTAGATTGAGGTGGACTAATTAT 375 Query 178 CTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACT-ATTGTTCA 236 |||||||| || || |||||||||||||| || |||||||||||||||| | ||| | || Sbjct 376 CTTCGACCTGGGATCAAGCGTGGAAATTTCACCGAGCATGAAGAGAAGA-TGATTCTCCA 434 Query 237 TCTTCAAGCCCTTTTAGGCAACAGATGGGCAGCCATAGCATCATACCTTCCAGAAAGGAC 296 ||||||||| ||||| || ||||| |||||||| ||||||||||| |||||||||||||| Sbjct 435 TCTTCAAGCTCTTTTGGGAAACAGGTGGGCAGCTATAGCATCATATCTTCCAGAAAGGAC 494 Query 297 AGACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAGAAGGTTAA 356 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct 495 AGACAATGATATAAAGAACTATTGGAACACTCATTTGAAGAAAAAGCTCAAGAAGATGAA 554 Query 357 TGAATCTGGTGA-AGAAG-AT-AATGATGGTGTCTCCTCATCAA-ACA-CT--AGCTCA- 408 ||| ||| |||| || | || || |||| | | | || || || || | ||| Sbjct 555 TGATTCTTGTGATAGTACTATCAACAATGGCCT-TGATAATAAAGACTTCTCCATATCAA 613 Query 409 -CAAAAG-A--ACC--A--TCAAAGCA-CTAAC---A--AA-GGTCAATGGGAAAGAAGA 453 ||||| | ||| | |||||||| | ||| | || ||||||||||| ||||| Sbjct 614 ACAAAAACACTACCTCACATCAAAGCAGC-AACTCCAGTAAAGGTCAATGGGAGAGAAGG 672 Query 454 CTTCAGACAGATATTAACATGGCAAAACAAGCTCTTTGTGAGGCCTTGTCT-TTAGACAA 512 |||||||||||||| |||||||| ||||||||||||||||| ||||||||| || ||||| Sbjct 673 CTTCAGACAGATATCAACATGGCTAAACAAGCTCTTTGTGATGCCTTGTCTATT-GACAA 731 Query 513 ACCA 516 |||| Sbjct 732 ACCA 735 > AT1G08810.1 | Symbols: MYB60, AtMYB60 | myb domain protein 60 | chr1:2819065-2820395 REVERSE LENGTH=1123 Length=1123 Score = 291 bits (157), Expect = 1e-77 Identities = 296/361 (82%), Gaps = 17/361 (5%) Strand=Plus/Plus Query 1 ATGGGAAGACCACCTTGCTGTGAAAAGAT-TGGAGTGAAGAAAGGACCATGGACACCAGA 59 ||||| || || || |||||||| ||||| ||| | ||||||||||||||||| || || Sbjct 67 ATGGGTAGGCCTCCATGCTGTGACAAGATAGGGA-TCAAGAAAGGACCATGGACTCCTGA 125 Query 60 GGAAGACATCA-TCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTG 118 ||||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||| | Sbjct 126 AGAAGATATCATTCTT-GTTTCTTACATTCAAGAACATGGTCCTGGAAACTGGAGATCAG 184 Query 119 T-CCCAACTAACACAGG-TT-T-GAGATGTAGCAAGAGCTGCAGATTGAGATGGACTAAT 174 | |||| | ||||| || || | |||||| ||||| || || ||| |||||||||| ||| Sbjct 185 TTCCCACC-AACACTGGGTTATTGAGATGCAGCAAAAGTTGTAGACTGAGATGGACAAAT 243 Query 175 TATCTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACT-ATTGT 233 ||||| |||| || ||||| |||||||| |||||| |||||||| | || | || | Sbjct 244 TATCTGAGACCTGGAATTAAACGTGGAAACTTTACTCCTCATGAAGA-AGGAATGATCAT 302 Query 234 TCATCTT-CAAGCCCTT-TTAGGCAACAGATGGGCAG-CCATAGCATCATACCTTCCAGA 290 ||| ||| |||||| || || || |||| |||||| | ||||||| |||||||| ||| | Sbjct 303 TCA-CTTGCAAGCC-TTATTGGGTAACAAATGGGC-GTCCATAGCTTCATACCTACCACA 359 Query 291 AAGGACAGACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAGAA 350 ||| || ||||||||||| |||||||| |||||||| || || |||||||||||||| || Sbjct 360 AAGAACGGACAATGATATCAAGAACTACTGGAACACACATTTAAAGAAGAAGCTCAACAA 419 Query 351 G 351 | Sbjct 420 G 420 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59989651275 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5