BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496515 Length=783 Score E Sequences producing significant alignments: (Bits) Value AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATND... 1099 0.0 > AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDPK2 | nucleoside diphosphate kinase 2 | chr5:25371904-25373861 REVERSE LENGTH=937 Length=937 Score = 1099 bits (595), Expect = 0.0 Identities = 690/735 (94%), Gaps = 9/735 (1%) Strand=Plus/Plus Query 1 GAAGCTAAGACAAAGCGCAGAAAATGGTGGGAGCGACTGTGGTTAGTAAATGGACT---C 57 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 1 GAAGCTAAGACAAAGCGCAGAAAATGGTGGGAGCGACTGTAGTTAGTAAATGGACTCCCC 60 Query 58 TCTGTGTTACTTCGCCGTCGGTA-AGAAACTCGACAAGTCTCAATCCACACTGCTCTCCG 116 | ||||| |||||||| ||| | ||||||||| ||||||||||||||||||| ||||| Sbjct 61 TATGTGTGGCTTCGCCGCCGG-AGAGAAACTCGGCAAGTCTCAATCCACACTGTTCTCCA 119 Query 117 GCCAGTGTTAA-CCTACGCACAGAGTTGGCCGCATTTCGTCCTCAGTTCCGTCTCTTCTC 175 ||||| ||||| || | |||| |||||||||||||||||||||||||||||| ||||| Sbjct 120 GCCAGGGTTAATTTTA-GAACAGCGTTGGCCGCATTTCGTCCTCAGTTCCGTCTTTTCTC 178 Query 176 GCCCGAA-TCATCGTCTCGCCGCCGTCTTCGCGCTTCCAGCTCCGCCGAATCGGGAATCT 234 | | || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 TCGC-AATTCCGCGTCTCGCCGCCGTCTTCGCGCTTCCAGCTCCGCCGAATCGGGAATCT 237 Query 235 TCCTCCCTCACCTTGTAGCTTCTATGGAGGAAGTTGAGGATACTTACATTATGGTGAAAC 294 |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 238 TCCTTCCTCACCTTGTAGCTTCTATGGAGGACGTTGAGGAGACTTACATTATGGTGAAAC 297 Query 295 CTGATGGCATACAACGAGGCCTTGTAGGAGAAATCATCTCTCGCTTTGAGAAGAAGGGAT 354 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct 298 CTGATGGCATACAACGAGGCCTTGTAGGAGAAATCATTTCTCGCTTTGAGAAAAAGGGGT 357 Query 355 TTAAACTTATTGGGCTCAAGATGTTTCAGTGCCCAAAAGAATTGGCTGAGGAGCATTACA 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 358 TTAAACTTATTGGGCTCAAGATGTTTCAGTGCCCAAAAGAATTGGCTGAGGAGCATTATA 417 Query 415 AGGATCTTAGTGCTAAATCATTCTTTCCTAACCTGATTGAGTACATCACTTCAGGCCCAG 474 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 418 AGGATCTTAGTGCTAAATCATTCTTTCCTAACCTGATTGAGTACATCACTTCAGGTCCAG 477 Query 475 TTGTGTGTATGGCTTGGGAAGGTGTTGGCGTTGTTGCTTCAGCCAGGAAGCTAATAGGGA 534 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 478 TTGTGTGTATGGCTTGGGAAGGTGTTGGTGTTGTTGCTTCAGCCAGGAAGCTAATAGGGA 537 Query 535 AAACAGATCCTCTTCAAGCTGAACCTGGTACTATAAGAGGAGATCTTGCTGTGCAAACCG 594 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 AAACAGATCCGCTTCAAGCTGAACCTGGTACTATAAGAGGAGATCTTGCTGTGCAAACCG 597 Query 595 GAAGGAACATTGTGCACGGTAGTGATAGTCCTGAAAACGGCAAGCGTGAGATTGGTCTGT 654 |||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 598 GAAGGAACATTGTGCATGGTAGTGACAGCCCTGAAAACGGCAAGCGTGAGATTGGTCTGT 657 Query 655 GGTTCAAAGAAGGCGAGCTATGCGAGTGGGATTCGGCTCTGGCTACATGGCTAAGGGAGT 714 |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 658 GGTTCAAAGAGGGCGAGCTATGCAAGTGGGATTCGGCTCTAGCTACATGGCTAAGGGAGT 717 Query 715 GATCATTGAGGAGAC 729 |||| ||||| |||| Sbjct 718 GATCCTTGAGAAGAC 732 Score = 95.3 bits (51), Expect = 8e-19 Identities = 53/54 (98%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 730 TACTTGTTTTCTTGTTACTGATGATGAGCTTTGGTGTTTTGTTCCTGATTTTGG 783 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 756 TACTTGTTTTCTTGTTACCGATGATGAGCTTTGGTGTTTTGTTCCTGATTTTGG 809 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38077483426 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5