BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496541 Length=1175 Score E Sequences producing significant alignments: (Bits) Value AT5G63530.1 | Symbols: ATFP3, FP3 | farnesylated protein 3 | ch... 1792 0.0 AT3G02960.1 | Symbols: | Heavy metal transport/detoxification ... 69.4 7e-11 > AT5G63530.1 | Symbols: ATFP3, FP3 | farnesylated protein 3 | chr5:25433154-25435834 FORWARD LENGTH=1413 Length=1413 Score = 1792 bits (970), Expect = 0.0 Identities = 1096/1155 (95%), Gaps = 16/1155 (1%) Strand=Plus/Plus Query 29 AGgaagagaagaaaccagaagcagcagaggaaaagaaaatggaagagaagaaaccagaag 88 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 133 AGGAAGAGAAGAAACCAGAAGCAGCAGAGGAAAAGAAAATGGAAGAGAAGAAACC---AG 189 Query 89 aagagaaaaaagaaggagaagaaaagaaagtggaggctgagaaaaaaggagaagattctg 148 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 190 AAGAGAAAAAAGAAGGAGAAGACAAGAAAGTGGATGCTGAGAAAAAAGGAGAAGATTCTG 249 Query 149 acaagaaaCCTC----A--AGAATCTAACAAAGATTCCAAAGAAGATTCTGCTCCCGCGC 202 ||||||| |||| | |||||||||||||||||||||||||||||||||||| ||| Sbjct 250 ACAAGAAGCCTCAAGAAGGAGAATCTAACAAAGATTCCAAAGAAGATTCTGCTCCGGCGG 309 Query 203 CGCCGGAGGCTCCAGCACCGCCTCCTCCGCCGCAAGAGATTGTTCTTAAGGTTTACATGC 262 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 310 CGCCTGAGGCTCCAGCACCGCCTCCTCCGCCGCAAGAGGTTGTTCTTAAGGTTTACATGC 369 Query 263 ACTGTGAAGGATGTGCTAGAAAAGTCCGCCGTTGTCTCAAAGGCTTCGAAGGAGTGGAAG 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 370 ACTGTGAAGGATGTGCTAGAAAAGTCCGCCGTTGTCTCAAAGGCTTCGAAGGAGTGGAAG 429 Query 323 ATGTGATGACTGATTGTAAAACGGGGAAAGTGGTGGTGAAAGGTGAGAAAGCTGATCCAT 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430 ATGTGATGACTGATTGTAAAACGGGGAAAGTGGTGGTGAAAGGTGAGAAAGCTGATCCAT 489 Query 383 TGAAAGTATTAGCTAGAGTTCAGAGGAAGACCCACCGTCAAGTTCAGCTTCTGTCTCCGA 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 490 TGAAAGTATTAGCTAGAGTTCAGAGGAAGACCCACCGTCAAGTTCAGCTTCTGTCTCCGA 549 Query 443 TTCCTCCGCCACCTCCGCCGCCGGAAAAGAAAGCAGAGGAGGAGAAACCCATTGTGGAAG 502 ||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 550 TTCCTCCTCCGCCTCCGCCGCCGGAGAAGAAAGCAGAGGAGGATAAACCCATTGTGGAAG 609 Query 503 AGAAGAAAGTGAAGCCTCCGGTGGTCGTGACGGTGGTTCTTAAGGTTCACATGCACTGTG 562 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 610 AGAAGAAAGTGGAGCCTCCGGTGGTTGTGACGGTGGTTCTTAAGGTTCACATGCACTGTG 669 Query 563 AAGCTTGTGCGACAGAGATCAAGAAACGGATCATGAGAATGAAAGGAGTGGAATCTGCTG 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 670 AAGCTTGTGCGACAGAGATCAAGAAACGGATCATGAGAATGAAAGGAGTGGAATCTGCTG 729 Query 623 AATCCGACTTAAAGGGTTCTCAAGTAACGGTGAAAGGAGTGTTTGAACCACAAAAGCTTG 682 |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 730 AATCCGACTTAAAGAGTTCTCAAGTGACGGTGAAAGGAGTTTTTGAACCACAAAAGCTTG 789 Query 683 TAGAGTACGTTTATAAGCGAACCGGAAAACACGCTGCGATCATGAAAATCGACCCACCGC 742 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 790 TAGAATACGTTTATAAGCGAACCGGAAAACATGCTGCGATCATGAAAATCGACCCACCGC 849 Query 743 CCCCACCACCACCTGAGGAGTCGGCAGCagaaggagagaagaag-gaagaaggaaaggga 801 | |||||||||||||||||| |||| || | || | |||| || |||||||||| | | Sbjct 850 CTCCACCACCACCTGAGGAGGCGGCTGCGGCAGC-G-GAAGGAGAGAAGAAGGAA-GA-A 905 Query 802 gaaaacggtggaggagaatccaaaggcgaagaagggaaggacgaaaaggcgaagacggac 861 ||||| || | |||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 906 GAAAAGGGAGAAGGAGAATCCAAAGGCGAAGAAGGGAAGGATGATAAGGCGAAGACGGAC 965 Query 862 gaagaaaagaaagaaggggatggcggtaaaggggaaggCGAAGCAGCGGAAAATGGCGGT 921 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 966 GAAGAAAAGAAAGAAGGGGATGGTGGTAAAGGGGAAGGCGAAGCAGCGGATAATGGCGGT 1025 Query 922 GGGGAGGAAGAGGGTAAAGTTGTGGAGGTGAGAAAGATAGAGAATCCTTATTACTACTAC 981 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1026 GGGGAGGAAGAAGGCAAAGTTGTGGAGGTGAGAAAGATAGAGAATCCTTATTACTACTAC 1085 Query 982 TATTACCAACCACCGCGTGTGGC-AGTTCCGCCTATGGAAATGCCGCCACACGCTTATCC 1040 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 1086 TATTACCAACCACCGCGTGTGGCGA-TTCCGCCTATGGAAATGCCGCCACACGCTTATCC 1144 Query 1041 GCCTCAATTATTCAGTGACGAGAATCCAAATGCATGTACCGTAATGTAACAAAGAAAAAC 1100 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1145 GCCTCAATTGTTCAGCGACGAGAATCCAAATGCATGTACTGTAATGTAACAAAGAAAAAC 1204 Query 1101 GCAAACGCTATAATGGGTATAATGGGAAATATTCTGAACAATTTTGATGAAGTGGGTACA 1160 ||||| ||||||| |||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 1205 GCAAATGCTATAAAGGGTATAATGGGGAATATTTTGAACAATTTTGATGAAGTGGGTACA 1264 Query 1161 TGGCCTTTGCTGTCT 1175 |||| |||||||||| Sbjct 1265 TGGCATTTGCTGTCT 1279 > AT3G02960.1 | Symbols: | Heavy metal transport/detoxification superfamily protein | chr3:667245-668626 REVERSE LENGTH=741 Length=741 Score = 69.4 bits (37), Expect = 7e-11 Identities = 41/43 (95%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 236 AAGAGATTGTTCTTAAGGTTTACATGCACTGTGAAGGATGTGC 278 |||| |||||||| ||||||||||||||||||||||||||||| Sbjct 107 AAGAAATTGTTCTGAAGGTTTACATGCACTGTGAAGGATGTGC 149 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57680426205 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5