BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496546 Length=1681 Score E Sequences producing significant alignments: (Bits) Value AT5G63570.1 | Symbols: GSA1 | glutamate-1-semialdehyde-2,1-amin... 2529 0.0 AT3G48730.1 | Symbols: GSA2 | glutamate-1-semialdehyde 2,1-amin... 1295 0.0 > AT5G63570.1 | Symbols: GSA1 | glutamate-1-semialdehyde-2,1-aminomutase | chr5:25451875-25453841 FORWARD LENGTH=1728 Length=1728 Score = 2529 bits (1369), Expect = 0.0 Identities = 1599/1704 (94%), Gaps = 40/1704 (2%) Strand=Plus/Plus Query 1 AATCAGAAGCCCACCCACTTCGATTACCAACTCCGACCGCCAGAGACAGCGAGCTTCAAA 60 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 17 AATCATAAGCCCACCCACTTCGATTACCAACTCCGACCGCCAGAGACAGCGAGTTTCAGA 76 Query 61 GCAACGATGTCGGCGACGCTTACAGGATCGGGAACTGCTTTGGGGTTTTCGTGTTCCTCA 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 77 TCAAAGATGTCGGCGACGCTTACAGGATCGGGAACTGCTTTGGGGTTTTCGTGTTCCTCG 136 Query 121 AAGATCTCGAAAAGAATTTCTTCTTCGCC-GTCTTCTAATCGATGCTGCATCAAGATGTC 179 ||||||||||||||| |||||||||| || | ||||||| |||||||||||||||||||| Sbjct 137 AAGATCTCGAAAAGAGTTTCTTCTTCACCAG-CTTCTAACCGATGCTGCATCAAGATGTC 195 Query 180 TGTTTCCGTCGACGAGAAGAAGAAAAGTTTCACTCTTCAGAAATCCGAGGAAGCTTTCAA 239 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 196 TGTTTCCGTCGACGAGAAGAAGAAAAGTTTCAGTCTTCAGAAATCTGAGGAAGCTTTCAA 255 Query 240 TGCTGCTAAGAATCTAATGCCTGGAGGTGTGAATTCCCCTGTTCGAGCCTTCAAATCCGT 299 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 256 TGCTGCTAAGAATCTAATGCCTGGAGGTGTGAATTCCCCTGTTCGAGCATTCAAATCCGT 315 Query 300 TGGTGGACAACCTGTTTTGATTGATTCCGTTAAAGGCTCAAAAATGTGGGACATTGATGG 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 316 TGGTGGACAACCTGTTTTGATTGATTCTGTTAAAGGCTCAAAAATGTGGGACATTGATGG 375 Query 360 AAATGAGTACATTGACTACGTTGGCTCTTGGGGACCAGCTATTATTGGCCATGCCGATGA 419 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 376 AAATGAGTATATTGACTACGTTGGCTCTTGGGGACCTGCTATTATTGGCCATGCTGATGA 435 Query 420 CGAGGTTCTTGCAGCTTTAGCTGAGACGATGAAGAAAGGAACAAGCTTTGGTGCTCCTTG 479 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 CGAGGTTCTTGCGGCTCTAGCTGAGACGATGAAGAAAGGAACAAGCTTTGGTGCTCCTTG 495 Query 480 TCTCTTAGAGAATGTTTTAGCTGAGATGGTTATATCAGCTGTTCCCAGCATTGAAATGGT 539 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 TCTCTTGGAGAATGTTTTAGCTGAGATGGTTATATCAGCTGTTCCCAGCATTGAAATGGT 555 Query 540 TCGGTTTGTCAACTCTGGTACTGAAGCGTGTATGGGTGTGCTCCGTCTCGCCAGAGCTTT 599 ||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 556 TCGGTTTGTTAATTCTGGTACTGAAGCGTGTATGGGTGTGCTTCGTCTTGCCAGAGCTTT 615 Query 600 CACTAACAAAGAGAAATTCATCAAGTTTGAAGGGTGTTATCACGGTCATGCTAACGCCTT 659 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 616 CACTAACAAAGAGAAGTTCATTAAGTTTGAAGGGTGTTATCACGGTCATGCTAACGCCTT 675 Query 660 TCTTGTTAAAGCTGGTAGCGGTGTAGCCACTCTAGGGCTACCGGACTCACCAGGTGTCCC 719 ||||||||||||||||| ||||| |||||| | |||||||||||||| ||||||||||| Sbjct 676 CCTTGTTAAAGCTGGTAGTGGTGTTGCCACTTTGGGGCTACCGGACTCTCCAGGTGTCCC 735 Query 720 TAAAGCAGCTACTTCTGATACTTTAACAGCTCCGTACAACGATCTCGAAGCTGTTGAGAA 779 ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 736 TAAAGCAGCTACTTCAGATACTTTAACAGCTCCGTACAATGATCTTGAAGCTGTTGAGAA 795 Query 780 GCTCTTTGCAGCGCATAAAGGGGAGATTTCTGCGGTTATTCTCGAACCCGTTGTTGGTAA 839 ||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 796 GCTCTTTGCTGCGCATAAAGGGGAGATTTCTGCGGTAATTCTCGAACCTGTTGTTGGTAA 855 Query 840 CTCTGGATTCATCCCTCCTACACCGGAATTCATCAACGGTTTACGCCAGCTTACTAAAGA 899 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 856 CTCCGGATTCATCCCTCCTACTCCGGAATTCATCAACGGTTTACGCCAGCTTACTAAAGA 915 Query 900 CAATGGTGTTCTTCTCATCTTCGATGAAGTCATGACCGGATTTCGTCTAGCCTATGGTGG 959 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 916 CAATGGTGTTCTTCTCATCTTCGATGAAGTCATGACTGGATTTCGTCTAGCCTATGGTGG 975 Query 960 AGCCCAAGAATACTTCGGAATCACGCCTGATCTAACTACTCTTGGTAAAATTATTGGCGG 1019 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 976 AGCCCAAGAATACTTTGGAATCACGCCTGATCTAACTACTCTTGGTAAAATTATTGGTGG 1035 Query 1020 GGGTCTTCCCGTGGGAGCATACGGTGGGAGACGTGATATTATGGAGATGGTTGCGCCCGC 1079 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1036 GGGTCTTCCCGTGGGAGCATACGGTGGTAGACGTGATATTATGGAGATGGTTGCTCCCGC 1095 Query 1080 AGGACCAATGTACCAAGCTGGGACTCTAAGTGGTAATCCGCTGGCAATGACTGCAGGGAT 1139 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1096 TGGACCAATGTACCAAGCCGGGACTCTAAGTGGTAATCCGCTGGCAATGACTGCAGGGAT 1155 Query 1140 TCACACGCTGAAGCGGCTAAAGCAGGCAGGAACATATGAGTATTTAGACAAGATCACAAA 1199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1156 TCACACGCTGAAGCGGCTAAAGCAGGCAGGAACATATGAGTATTTAGACAAGATCACGAA 1215 Query 1200 GGAACTAACCAACGGAATCTTAGAAGCTGGAAAGAAAACCGGGCATCCAATGTGCGGCGG 1259 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 1216 GGAACTAACCAACGGAATCTTAGAAGCCGGAAAGAAAACCGGGCATCCAATGTGCGGGGG 1275 Query 1260 TTATATAAGCGGTATGTTTGGTTTCTTTTTCGCAGAAGGACCGGTCTACAACTTTGCAGA 1319 ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1276 TTACATAAGCGGTATGTTTGGATTCTTTTTCGCAGAAGGACCGGTTTACAACTTTGCAGA 1335 Query 1320 -TGCAAAGAAGAGCGACACCGAGAAGTTTGGTAGGTTTTTCAGGGGAATGTTGGAAGAAG 1378 | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1336 CT-CAAAGAAGAGCGACACAGAGAAGTTTGGTAGGTTTTTCAGGGGAATGTTGGAAGAAG 1394 Query 1379 GTGTTTACTTTGCACCGTCTCAGTTTGAGGCCGGGTTTACGAGCTTGGCTCACACTCCCG 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1395 GTGTTTACTTTGCACCGTCTCAGTTTGAGGCCGGGTTTACGAGCTTGGCTCACACTCCCG 1454 Query 1439 AGGATATACAGTTCACGATTGCTGCGGCTGAGAGGGTACTCAGTAGGATCTAGAATGTTC 1498 ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1455 AGGATATACAGTTAACAATTGCTGCGGCTGAGAGGGTACTGAGTAGGATCTAGAATGTTC 1514 Query 1499 CCAACCCTGAGTCTAGCTTCACAATCTT-ATGCTTT--------TG---ATG-----A-- 1539 |||||||||||||||| ||||||||||| ||| ||| || ||| | Sbjct 1515 CCAACCCTGAGTCTAGTTTCACAATCTTCATGTTTTGGGGACGATGTGTATGGTTTGATG 1574 Query 1540 A-CGGATGAAATAATTCTTGTGTAGTGAGTTGAATTTTGTTTTCTTTTGTTTCATCGATA 1598 | |||||| ||||||||||||||||||||||||||||||||| | | || | || Sbjct 1575 AGCGGATGGAATAATTCTTGTGTAGTGAGTTGAATTTTGTTT-CAT------CA--G-TA 1624 Query 1599 GAGGTTGAGGTTTTT-GTATTGTCAGATCATCTGTTCTGTTAATGTAATGGTTTTATGTT 1657 ||| ||||| ||||| ||||| | |||||||||||| ||||||||||||||||||| Sbjct 1625 GAGCTTGAGATTTTTTGTATTTTAAGATCATCTGTT-----AATGTAATGGTTTTATGTT 1679 Query 1658 ATCTCCTAGAGAAATATTGCTTTT 1681 |||||||| ||||||||||||||| Sbjct 1680 ATCTCCTAAAGAAATATTGCTTTT 1703 > AT3G48730.1 | Symbols: GSA2 | glutamate-1-semialdehyde 2,1-aminomutase 2 | chr3:18049614-18051702 FORWARD LENGTH=1654 Length=1654 Score = 1295 bits (701), Expect = 0.0 Identities = 1211/1455 (83%), Gaps = 43/1455 (3%) Strand=Plus/Plus Query 60 AGCAACGATGTCGGCGACGCTTACAGGATC-GGGAACTGCTTTGGGGTTTTCGTGTTCCT 118 ||||| ||| | ||||||||||| ||||| ||| | |||| | ||||||||||| ||| Sbjct 78 AGCAA-AATGGCTGCGACGCTTACTGGATCAGGG-ATTGCTCTAGGGTTTTCGTGCTCCG 135 Query 119 CAAAGATCTCGAAAAGAATTTCTTCTTCGCCGTCTTCTAATCGAT-GCTGCATCAAGATG 177 ||||| |||| || || | |||||||| |||| | || || | |||||||||||||| Sbjct 136 CAAAGTTCTCTAAGAG-A--GCTTCTTCGTCGTC--C-AACCG-TCGCTGCATCAAGATG 188 Query 178 TCTGTTTCCGTCGACGAGAAGAAGAA-AAGTTTCACTCTTCAGAAATCCGAGGAAGCTTT 236 || ||||| || || ||||||| ||| || ||||||||||||||||| ||||||||||| Sbjct 189 TCGGTTTCGGTAGAGGAGAAGACGAAGAA-ATTCACTCTTCAGAAATCTGAGGAAGCTTT 247 Query 237 CAATGCTGCTAAGAATC-TAATGCCTGGAGGTGTGAATTCCCCTGTTCGAGCCTTCAAAT 295 ||||||||| ||||| | ||||||||||||||||||| || ||||| || || ||||||| Sbjct 248 CAATGCTGCGAAGAA-CTTAATGCCTGGAGGTGTGAACTCACCTGTACGTGCTTTCAAAT 306 Query 296 CCGTTGGTGGACAACCTGTTTTGATTGATTCCGTTAAA-GGCTCAAAAATGTGGGACATT 354 | |||||||||||||| || |||| ||||| | ||| |||||| ||| | |||||| Sbjct 307 CTGTTGGTGGACAACCAGTGGTGATGGATTCTG-CAAAGGGCTCACGAATAAGAGACATT 365 Query 355 GATGGAAATGAGTACATTGACTACGTTGGCTCTTGGGGACCAGCTATTATTGGCCATGCC 414 ||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 366 GATGGAAATGAATACATTGACTATGTTGGATCTTGGGGACCTGCTATAATTGGTCATGCT 425 Query 415 GATGACGAGGTTCTTGCAGCTTTAGCTGAGACGATGAAGAAAGGAACAAGCTTTGGTGCT 474 ||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| Sbjct 426 GATGATGAGGTTCTTGCTGCTTTGGCTGAGACAATGAAGAAAGGAACAAGCTTTGGTGCT 485 Query 475 CCTTGTCTCTTAGAGAATGTT-TTAGCTGAGATGGTTATATCAGCTGTTCCCAGCATTGA 533 ||||||||||||||||||||| || ||||||||||| || ||||||||||| || ||||| Sbjct 486 CCTTGTCTCTTAGAGAATGTTCTT-GCTGAGATGGTGATTTCAGCTGTTCCAAGTATTGA 544 Query 534 AATGGTTCGGTTTGTCAACTCTGGTACTGAAGCGTGTATGGGTGTGCTCCGTCTCGC-CA 592 ||||||||||||||| ||||| ||||| || || |||||||||||||| ||||| || | Sbjct 545 AATGGTTCGGTTTGTTAACTCCGGTACAGAGGCATGTATGGGTGTGCTACGTCTTGCTC- 603 Query 593 GAGCTTTCACTAAC-AAAGAGAAA-TTCATCAAGTTTGAAGGGTGTTATCACGGTCATGC 650 | || ||||| | ||| | ||| ||||||||||||||||| |||||||| |||||||| Sbjct 604 GTGCCTTCAC-AGGGAAACA-AAAGTTCATCAAGTTTGAAGGTTGTTATCATGGTCATGC 661 Query 651 TAACGCCTTTC-TTGTTAAAGCTGGTAGCGGTGTAGCCACTCTAGGG-CTACCGGACTCA 708 ||| | |||| |||| ||||| ||||| |||||||| ||| | ||| ||||| ||||| Sbjct 662 AAACTC-TTTCCTTGTCAAAGCAGGTAGTGGTGTAGCTACTTT-GGGTCTACCTGACTCG 719 Query 709 CCAGGTGTCCCTAAAGCAGCTACTTCTGATACTTTAACAGCTCCGTACAACGATCTCGAA 768 || || ||||| |||||||||||||| ||||||||||||||||| ||||| ||| | | Sbjct 720 CCTGGGGTCCCCAAAGCAGCTACTTCAGATACTTTAACAGCTCCATACAATGATATTGCT 779 Query 769 GCTGTTGAGAAGCTCTTTGCAGCGCATA-AAGGG-GAGATTTCTGCGGTTATTCTCGAAC 826 |||||||||||||| |||| || ||| | || || |||||| |||| | ||||| |||| Sbjct 780 GCTGTTGAGAAGCTTTTTG-AG-GCAAACAAAGGAGAGATTGCTGCCATCATTCTTGAAC 837 Query 827 CCGTTGTTGGTAACTCTGGATTCATCCCTCCTACACCGGAATTCATCAACGGTTTACGCC 886 | |||||||||||||| || || || | |||| ||| || ||||| | || |||||| Sbjct 838 CTGTTGTTGGTAACTCGGGTTTTATTACACCTAAACCAGAGTTCATTGAGGGAATACGCC 897 Query 887 AGCTTACTAAAGACAATGGTGTTCTTCTCATCTTCGATGAAGTCATGACCGGATTTCGTC 946 | | |||||||||||||||| |||||| || ||||||||||||||||| || |||||| Sbjct 898 GGATCACTAAAGACAATGGTGCTCTTCTTATTTTCGATGAAGTCATGACTGGTTTTCGTT 957 Query 947 TAGCCTATGGTGGAGCCCAAGAATACTTCGGAATCACGCCTGATCT-AACTACTCTTGGT 1005 |||||||||||||||| ||||||||||| |||||||| ||||| || ||| |||||||| Sbjct 958 TAGCCTATGGTGGAGCTCAAGAATACTTTGGAATCACACCTGA-CTTAACAACTCTTGGG 1016 Query 1006 AAAATTATTGGCGGGGGTCTTCCCGTGGGAGCATACGGTGGGAGACGTGATATTATGGAG 1065 ||||| || || || |||||||| ||||||||||||||||| ||| | || || ||||| Sbjct 1017 AAAATCATCGGTGGTGGTCTTCCTGTGGGAGCATACGGTGGAAGAAGAGACATCATGGAA 1076 Query 1066 ATGGTTGCGCCCGCAGGACCAATGTACCAAGCTGGGACTCTAAGTGGTAATCCGCTGGCA 1125 |||||||| ||||||||||| ||||| |||||||| || ||||||||||||||| |||| Sbjct 1077 ATGGTTGCACCCGCAGGACCGATGTATCAAGCTGGTACGCTAAGTGGTAATCCGTTGGCT 1136 Query 1126 ATGACTGCAGGG-ATTCACACGCTGAAGCGGCTAAAG-CAGGCAGGAACATATGAGTATT 1183 ||||| || ||| || ||||||||||||||| ||| | ||| |||| |||||||| || | Sbjct 1137 ATGACAGC-GGGTATACACACGCTGAAGCGGTTAA-GTCAGCCAGGGACATATGAATACT 1194 Query 1184 TAGACAAGATCACAAAGGAACTAACCAACGGAAT-CTTAGAAGCTGGAAAGAAAACCGGG 1242 |||||||||||||||| || || || || || || || |||||| || |||||||||||| Sbjct 1195 TAGACAAGATCACAAAAGAGCTTACAAATGGGATACT-AGAAGCCGGGAAGAAAACCGGG 1253 Query 1243 CATCCAATGTGCGGCGGTTATATAAGCGGTATGTTTGGTTTCTTTTTCGCAGAAGGACCG 1302 ||| | ||||| |||||||| |||||||| ||||| |||||||| ||| | |||||||| Sbjct 1254 CATGCGATGTGTGGCGGTTACATAAGCGGGATGTTCGGTTTCTTCTTCACGGAAGGACCC 1313 Query 1303 GTCTACAACTT-TGCAGATGCAAAGAAGAGCGACACCGAGAAGTTTGGTAGGTTTTTCAG 1361 ||||| | || | | |||||||||||||| || || ||||||||||| | ||||||||| Sbjct 1314 GTCTATGATTTCT-CGGATGCAAAGAAGAGTGATACAGAGAAGTTTGGAAAGTTTTTCAG 1372 Query 1362 GGGAATGTTGGAAGAAGGTGTTTACTTTGCACCGTCTCAGTTTGAGGCCGGGTTTACGAG 1421 |||||||||||||||||||| ||||| ||||| ||||| || |||||||| ||||| || Sbjct 1373 AGGAATGTTGGAAGAAGGTGTCTACTTGGCACCTTCTCAATTCGAGGCCGGTTTTACTAG 1432 Query 1422 CTTGGCTCACACTCCCGAGGATATACAGTTCACGATTGCTGCGGCTGAGAGGGTACTCAG 1481 ||||||||||||| | || || || || ||||| || || ||||| |||| ||| || || Sbjct 1433 CTTGGCTCACACTTCAGAAGACATCCAATTCACTATCGCAGCGGCCGAGAAGGTTCTAAG 1492 Query 1482 TAGGATCTAGAATGT 1496 | || |||| ||||| Sbjct 1493 TCGGCTCTAAAATGT 1507 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83081901975 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5