BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496566 Length=1618 Score E Sequences producing significant alignments: (Bits) Value AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfa... 1964 0.0 AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily... 549 3e-155 AT5G63790.1 | Symbols: ANAC102, NAC102 | NAC domain containing ... 147 4e-34 > AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfamily protein | chr5:25523845-25526593 FORWARD LENGTH=1691 Length=1691 Score = 1964 bits (1063), Expect = 0.0 Identities = 1208/1274 (95%), Gaps = 26/1274 (2%) Strand=Plus/Plus Query 367 AGTTTTCTTTTTCGGGCTTGATGGGTAAAGAGAATCAGTTGGAGACAACAAATTGTGGAG 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AGTTTTCTTTTTCGGGCTTGATGGGTAAAGAGAATCAGTTGGAGACAACAAATTGTGGAG 480 Query 427 TCAATGATCACGATTGTCCACCCGTCAAGAACGAAGAACTAGCAGCTGAGGCGCGTTATA 486 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 481 TCAATGATCACGATTGTCCACCCGTCAAGAACGAGGAACTAGCAGCTGAGGCGCGTTATA 540 Query 487 GTACAGACAGTGACTCGGGTTTACCAACCTGTCGTGTATGCCATTCTGCAGAATCTGACA 546 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 541 GTACAGACAGTGACTCGGGTTTGCCAACCTGTCGTGTATGCCATTCTGCAGAATCCGACA 600 Query 547 GACGAGGAGATACTGCCTTGGGGTTTTTGGGGATTACTCCTCCGGTTCCAGAAGCTCGTA 606 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 601 GACGAGGAGATACCGCCTTGGGGTTTTTGGGGATTACCCCTCCGGTTCCAGAAGCTCGTA 660 Query 607 AAAGCAATACAGACGAAAACGCTGATGATGTCAGCAAAGCTACAGAGTCTGAGCTGAAGA 666 |||||||| ||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct 661 AAAGCAATGTAGATGGAACCGCTGATGATGTCAGCAAAGCTACAGAGTCTGAGCTGAAGA 720 Query 667 ATTCTGTCGTCAAAAGCAATGGAAGGGAATCTGGCTTCATCGAAATGACAAGTCCTGATG 726 ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 721 ATTCTGTTGTCAAAAGCAATGGAAGGGAATCTGGCTTCATCGAATTAACAAGTCCTGATG 780 Query 727 CGGAAGTTTTCATTTGCACAAATGATATAGAAATGGGAATCCAGCTGCATCAGGATGCAT 786 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 781 CGGAAGTTTTCATTTGCACAAATGATATAGAAATGGGAATCCAGCAGCATCAGGATGCAT 840 Query 787 TGCTTGAGCTTGGATGTTCTTGCAAAAACGAGCTTGCTTTGGTACACTACGCTTGCGCAC 846 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 841 TGCTTGAGCTTGGATGTTCTTGCAAAAACGAGCTTGCTTTGGTACACTACGCTTGCGCGC 900 Query 847 TCAAGTGGTTTCTCAACCATGGATCCACCGTGTGTGAAATCTGTGGACATCCTGCAGAAA 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TCAAGTGGTTTCTCAACCATGGATCCACCGTGTGTGAAATCTGTGGACATCCTGCAGAAA 960 Query 907 ATATAAAGACTGCTGATTTCAACAAAGTGCTCATTGCCTTGAGAGATTACACAGCACTAA 966 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 961 ATATAAAGACTGCTGATTTCAACAAAGTGGTCATTGCCTTGAGAGATTACACAGCAATAA 1020 Query 967 GAGAAAGAACCGCTGATGGAGGAGATCCAATCCCTGTATTAGCGGTGAGTGCAGATTCAA 1026 |||||||||| |||||||||||||||| ||||||||||||| |||||| | ||||||||| Sbjct 1021 GAGAAAGAACTGCTGATGGAGGAGATCAAATCCCTGTATTACCGGTGAATACAGATTCAA 1080 Query 1027 CCATAGATTCAGATGAAGTTGCTGCCATTCGAAGGCAACGACTTAGTGAGATATCGTCAT 1086 |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct 1081 CCATTGATTCAGATGAAGTTGCTGTCATTCGAAGGCAACGACTTAGTGAGATAACGTCAT 1140 Query 1087 GGTTTGGTCCCCATTCCCTGAACAACAACAACAATAGTTCT-GTTGCGGCTTCTCAGGCT 1145 |||||||||||||||||||||||||||||||||| | | ||| | | || | |||| Sbjct 1141 GGTTTGGTCCCCATTCCCTGAACAACAACAACAACAACAATAGTT-CTG-TTG-C-GGCT 1196 Query 1146 ATCCCTGACCAACCTTTAGGAGTTGTGAACTTTGACATCTTACCTATGGAAAGCCGTGCA 1205 |||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| Sbjct 1197 ATCCCTGACCAACCTTTAGGTGTTGTGAACTTCGACATCTTACCTATGGAAAACCGTGCA 1256 Query 1206 ACTAAATGGGCTGTGGAAGGTACTGGGATTCTACTTGCTACCGGTTTACTCACTGTTACT 1265 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1257 ACTAAATGGGCTGTGGAAGGTACTGGGATTCTACTTGCTACAGGTTTACTCACTGTTACT 1316 Query 1266 TTGGTCTGGCTCATTGCCCCTCGTGTTGGAAAGAAAACTGCTAGGAGCGGACTTCACATC 1325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 TTGGTCTGGCTCATTGCCCCTCGTGTTGGAAAGAAAACTGCTAGGAGCGGACTTCACATA 1376 Query 1326 CTTCTTGGTGGTCTCTGTGCTTTAACAATAGTCATCTTCTTCAGATTTGTTGTGCTCACT 1385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1377 CTTCTTGGTGGTCTCTGTGCTTTAACAATAGTCATCTTCTTCAGATTTGTTGTGCTCACT 1436 Query 1386 AGAATCAGGTATGGTCCTGCACGCTACTGGGCAATCTTATTCATCTTCTGGTTTCTTGTG 1445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1437 AGAATCAGGTATGGTCCTGCACGCTACTGGGCAATCTTATTCATCTTCTGGTTTCTTGTG 1496 Query 1446 TTTGGTATTTGGGCTTCTCGTTCTAATGCTTCTCACAATAACCCTTGAATTCACCATCTC 1505 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 1497 TTTGGTATTTGGGCTTCTCGTTCTAATGCTTCTCACAATAGCCCTTGAATCCACCATCTC 1556 Query 1506 TCTC--T-----AT--CT----ATCT----GAGTCTGT--ATTCTT-CTCATGGAGAAAA 1545 |||| | || || |||| |||||||| |||||| ||| ||||||||| Sbjct 1557 TCTCAATCTCTCATGTCTCTCTATCTATCTGAGTCTGTGTATTCTTTCTCTTGGAGAAAA 1616 Query 1546 ATGTACATTGCTTCATTAAAGAA-AAATAAGCTCATGCTTCATTGAATATATATATGATT 1604 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1617 ATGTACATTGCTTCATTAAAGAAGAAATAAGCTCATGCTTCATTGAATATATATATGATT 1676 Query 1605 CATAATGGTTGGTC 1618 |||||||||||||| Sbjct 1677 CATAATGGTTGGTC 1690 Score = 501 bits (271), Expect = 8e-141 Identities = 344/376 (91%), Gaps = 18/376 (5%) Strand=Plus/Plus Query 1 GAATCTAAAACCACTCAGCTCTCCGCACCATGTGAAAGGTTGGTGTAGTGGCAAGAACTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GAATCTAAAACCACTCAGCTCTCCGCACCATGTGAAAGGTTGGTGTAGTGGCAAGAACTC 60 Query 61 TTTCGAATCTGAACGCCTT-AGCTCAGAGATACGAGCA--TT--------TT----TTAC 105 ||||||||||||||||||| ||||| |||| ||||||| || || |||| Sbjct 61 TTTCGAATCTGAACGCCTTAAGCTCTGAGAGACGAGCATTTTCCAGAAAATTCCCATTAC 120 Query 106 CTAATCCCCACAATTCCAGGAACCCAGAAATGATGGTTTTCGAAAGGCTCTAGCTTTCTC 165 |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTAATCCCCAGGATTCGATGAACCCAGAAATGATGGTTTTCGAAAGGCTCTAGCTTTCTC 180 Query 166 AAATCGAGATTTTGCTGAGGAGCTCATTGAAAGAATGCAAAATAGACCATCTTTCTCTTG 225 ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 181 AAATCCAGATTTTGCTGAGGAGCTCGTTGAAAGAATGCAAAATAGACCATCTCTCTCTTG 240 Query 226 TCCTTTGTCTTTCAGATCGTTTCTCTTTCAACGTGATATTAGAAG-ACAATACTAGATAC 284 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 241 TCCTTTGTCTTTCAGATCGTTTCTCTTTCAACGTGATATTAGA-GTACAATACTAGATAC 299 Query 285 AGTGAGGTCCTTTGTATTATCGGACCTTGAGTTGTCTTGTTTAAGTGGGATAACCTTT-T 343 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | Sbjct 300 CGTGAGGTCCTTTGTATTATTGGACCTTGAGTTGTCTTGTCTAAGTGGGATAACCTTTCT 359 Query 344 AGTGAACttttttttG 359 ||||||| |||| ||| Sbjct 360 AGTGAACATTTTCTTG 375 > AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:2852106-2854513 FORWARD LENGTH=1416 Length=1416 Score = 549 bits (297), Expect = 3e-155 Identities = 656/821 (80%), Gaps = 58/821 (7%) Strand=Plus/Plus Query 702 TTCATCGAAATGACAAGTCCTGATGCG-GAAG-TTTTCATT-TGCACAA--ATGATATAG 756 ||||||||| ||| ||||||||||| | |||| |||| || |||| || | ||||||| Sbjct 431 TTCATCGAACTGATAAGTCCTGATG-GAGAAGTTTTTGTTTGTGCA-AACGACGATATAG 488 Query 757 AAATGGGAATC-CAGCTGCATCAG-GATGCA-TTGCTTGAGCTTGGATGTTCTTGCAAAA 813 ||||||| | | || ||||| | ||| | ||||| || ||||||||||||||||| | Sbjct 489 AAATGGG-AGCGTGGCAGCATC-GAGAT-AAGTTGCTAGAACTTGGATGTTCTTGCAAGA 545 Query 814 ACGAGCTTGCTTTGGTACACTACGCTTGCGCACTCAAGTGGTTTCTCAACCATGGATCCA 873 | || || |||||||||||||| ||||| ||| | || |||||| ||||||| ||||| | Sbjct 546 ATGATCTCGCTTTGGTACACTATGCTTGTGCATTGAAATGGTTTGTCAACCACGGATCAA 605 Query 874 CCGTGTGTGAAATCTGTGG-ACATCCTGCAGAAAATATAAAG-ACTGCTGATTTCAACAA 931 | || ||||| || || || | | || | || ||||| ||| || | |||||||||||| Sbjct 606 CTGTTTGTGAGATATGCGGAAAAACC-ACGGAGAATAT-AAGAACAGTTGATTTCAACAA 663 Query 932 AGTGCTCATTGCCTTGAGAGATTACACAGCACTAAGAGAAAGAACCGCTGATGGAGGAGA 991 |||| | || ||||| | ||||||| |||| |||||||||||||| || ||| ||||| Sbjct 664 AGTGGTTATCGCCTTAAAAGATTACGCAGCGCTAAGAGAAAGAACAGCGGAT---GGAGA 720 Query 992 TCC-AATCCCTGTA----TTAGCGGTGAGTGCAGAT--TCAACCATAGATTCAGATGAAG 1044 ||| ||| |||||| ||| | | ||| | ||| || ||| | |||| || Sbjct 721 TCCAAAT-CCTGTAGTGGTTAACAACAACACCAGTTCGTCAGGGATTGATCCTGATGCAG 779 Query 1045 TTGCTGCCATTCGAAGGCAACGACTTAGTGAGATATCGTCATGGTTTGGTCCCCATTCCC 1104 |||| |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 780 TTGCAGCCATTCGAAGGCAACGACTTAGTGAGATATCGTTATGGTTTGGTCCTCATTGT- 838 Query 1105 TGAAC-AACAACAACAATAGT--TC-T---G-T--TGC-GG--C---TTCT-C--AGGCT 1145 | ||| ||||||||||||||| | | | | ||| || | |||| | ||| | Sbjct 839 TCAACCAACAACAACAATAGTAGTAATTCCGCTGCTGCAGGGACGGCTTCTTCTCAGGTT 898 Query 1146 ATCC-CTGACCAACCTTTAGGAGT-T-GTGAACTTTGACATCTTACCTATGGAAAGCCGT 1202 | | |||| |||||| | || || | || |||||||| ||||| ||||||||||||||| Sbjct 899 A-CATCTGAACAACCTGT-GG-GTATAGTAAACTTTGATATCTTGCCTATGGAAAGCCGT 955 Query 1203 GCAACTAAATGGGCTGTGGAAGGTACTGGGATTCTACTTGCTACCGGTTTACTCACTGTT 1262 || ||||||||||| ||||||||||| || || |||||||| ||||| |||||||| ||| Sbjct 956 GCGACTAAATGGGCGGTGGAAGGTACCGGAATACTACTTGCAACCGGATTACTCACAGTT 1015 Query 1263 ACTTTGGTCT-GGCTCATTGCCCCTCGTGTTGGAAAGAAAACTGCTAGGAGCGGACTTCA 1321 ||||||| || |||||||||| |||||||| ||||||| |||||| | ||| || || || Sbjct 1016 ACTTTGG-CTTGGCTCATTGCTCCTCGTGTCGGAAAGAGAACTGCAAAGAGTGGTCTACA 1074 Query 1322 CATCCTTCTTGGTGGTCTCTGTGCTTTAACAATAGTCATCTTCTTCAGATTTGTTGTGCT 1381 ||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 1075 CATACTTCTAGGTGGTCTCTGTGCTTTAACAGTAGTCATCTTCTTCAGATTCGTTGTGCT 1134 Query 1382 CACTAGAATCAGGTATGGTCCTGCACGCTACTGGGCAATCTTATTCATCTTCTGGTTTCT 1441 || ||||||||||| || || ||||| ||||||||||| || ||| ||||||||||||| Sbjct 1135 GACAAGAATCAGGTACGGACCAGCACGTTACTGGGCAATATTGTTCGTCTTCTGGTTTCT 1194 Query 1442 TGTGTTTGGTATTTGGGCTTCTCGTTCTA-ATGCTTCTCAC 1481 ||||||||| ||||||||||| ||||| | | ||||||||| Sbjct 1195 TGTGTTTGGCATTTGGGCTTCACGTTC-ACACGCTTCTCAC 1234 > AT5G63790.1 | Symbols: ANAC102, NAC102 | NAC domain containing protein 102 | chr5:25526509-25528013 REVERSE LENGTH=1317 Length=1317 Score = 147 bits (79), Expect = 4e-34 Identities = 82/83 (99%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 1537 TGGAGAAAAATGTACATTGCTTCATTAAAGAA-AAATAAGCTCATGCTTCATTGAATATA 1595 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1316 TGGAGAAAAATGTACATTGCTTCATTAAAGAAGAAATAAGCTCATGCTTCATTGAATATA 1257 Query 1596 TATATGATTCATAATGGTTGGTC 1618 ||||||||||||||||||||||| Sbjct 1256 TATATGATTCATAATGGTTGGTC 1234 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79919267640 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5