BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496600 Length=2006 Score E Sequences producing significant alignments: (Bits) Value AT5G64050.1 | Symbols: ATERS, OVA3, ERS | glutamate tRNA synthe... 3206 0.0 > AT5G64050.1 | Symbols: ATERS, OVA3, ERS | glutamate tRNA synthetase | chr5:25629855-25633209 REVERSE LENGTH=2164 Length=2164 Score = 3206 bits (1736), Expect = 0.0 Identities = 1937/2029 (95%), Gaps = 34/2029 (2%) Strand=Plus/Plus Query 1 AGTTATGAGGCTTTAATCGAATTTATTGCTTTTGCTTTGCTTTGCGACTTTCTTCTTTCC 60 ||||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||| Sbjct 2 AGTTATGAGGCTTTAATCGAA--T-TTG---TTGCTTTGCTTTGCGACTTTCATCTTTCC 55 Query 61 GGA-TAATCAAATCCTTTTATCCTCTGAAAAATCTCAACTTTCGAAGAAAAAACGCAAAA 119 || ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 56 -GATTAATCAAATCCTTTTATCCTCTGAAAAATCTCAACTTTCGAAG--AAAACG-AAAA 111 Query 120 TGGCGAGCCTTGTCTACGGGACGCCGTGGCTTAGGATTAGGTCTTTACCGGAGCTTGCTC 179 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 112 TGGCGAGCCTTGTCTACGGGACGCCGTGGCTTAGGGTTAGATCTTTACCGGAGCTTGCTC 171 Query 180 CAGCTTTTCTCAGACGTCGTCAATCTTCTTTATTTTATTGTTCTCGGCGAAGCTTCGCGG 239 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 172 CAGCTTTTCTCAGACGGCGTCAATCTTCTTTATTTTACTGTTCTCGGCGAAGCTTCGCGG 231 Query 240 TGGTTGCGTGTTCTTCACCAGTTAGTACTGGTGGGTCTGTTAGAGTTCGTTTCGCGCCTT 299 ||||||||||||| | ||||| | | |||||||||||| ||||||||||||||||||| Sbjct 232 TGGTTGCGTGTTCCACTCCAGTCAACAATGGTGGGTCTGTCAGAGTTCGTTTCGCGCCTT 291 Query 300 CTCCCACTGGTAATCTCCATGTAGGTGGAGCAAGGACTGCTCTTTTCAACTACTTGTTCG 359 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 CTCCTACTGGTAATCTCCATGTAGGTGGAGCAAGGACTGCTCTTTTCAACTACTTGTTCG 351 Query 360 CGAGGTCTAAAGGAGGGAAATTTGTGCTGAGAATTGAAGATACGGATTTGGAGAGATCAA 419 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 352 CGAGGTCTAAAGGAGGGAAATTTGTGCTGAGAATTGAAGATACAGATTTGGAGAGATCAA 411 Query 420 CACGTGAATCTGAAGCAGCTGTTCTTCAGGATCTCTCATGGCTGGGTCTTGATTGGGATG 479 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 412 CACGTGAATCTGAAGCAGCTGTTCTTCAGGATCTCTCATGGCTTGGTCTTGATTGGGATG 471 Query 480 AAGGTCCTGGGGTTAGTGGAGACTTTGGTCCTTATCGACAATCCGAAAGAAATGCTTTGT 539 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 472 AAGGTCCTGGGGTTAGTGGAGACTTTGGTCCTTATCGGCAATCTGAAAGAAATGCTTTGT 531 Query 540 ACAAACAATATGCAGAGAAGCTTTTAGAGTCAGGTCATGTCTATCGATGCTTTTGCTCCA 599 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 532 ATAAACAATATGCAGAGAAGCTTTTAGAGTCAGGTCATGTCTATCGATGCTTTTGCTCAA 591 Query 600 GTGAGGAACTTGTAAAGATGAAGGAGATTGCAAAGTTGAAACAGTTGCCTCCAGTATATA 659 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 592 GTGAGGAACTTGTAAAGATGAAGGAGAATGCAAAGTTGAAACAGTTGCCTCCAGTATATA 651 Query 660 CCGGGAAATGGGCAACAGCTTCTGATTCTGAAATAGAGCAAGAGTTAGAAAAGGGAACAC 719 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 652 CCGGGAAATGGGCAACAGCTTCTGATGCTGAAATAGAGCAAGAGTTAGAAAAGGGAACAC 711 Query 720 CTTTTACTTACCGGTTTCGTGTGCCAAAGGAAGGCTCTTTGAAAATTAATGACCTGATTC 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 712 CTTTTACTTACCGGTTTCGTGTGCCAAAGGAAGGCTCTTTGAAAATTAATGACCTGATTC 771 Query 780 GTGGCGAGGTATGTTGGAACTTGGATACTCTTGGAGATTTTGTGGTAATGAGGAGTAATG 839 |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 772 GTGGCGAGGTCTGTTGGAACTTGGATACTCTTGGGGATTTTGTGGTAATGAGAAGTAATG 831 Query 840 GCCAACCTGTTTACAACTTTTGTGTTACGGTAGATGATGCTACCATGGCTATATCACATG 899 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 832 GCCAACCCGTTTACAACTTTTGTGTTACGGTAGATGATGCTACCATGGCTATATCACATG 891 Query 900 TTATAAGGGCTGAAGAACACTTACCTAATACTTTGAGGCAGGCTCTAATTTACAAGGCTC 959 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 892 TTATAAGGGCTGAAGAACACTTGCCTAATACTTTGAGGCAGGCTCTAATTTACAAGGCTC 951 Query 960 TGGAGTTCCCGATGCCTCAGTTTGCACATGTTTCTTTAATTCTAGCTCCGGATAGAAGTA 1019 | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 952 TTAAGTTCCCGATGCCTCAATTTGCACATGTTTCTTTAATTTTAGCTCCGGATAGAAGTA 1011 Query 1020 AACTGTCAAAGCGACATGGGGCAACTTCTGTAGGCCAGTACAGAGAGATGGGATATCTAC 1079 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 AATTATCAAAGCGACATGGGGCAACTTCTGTAGGCCAGTACAGAGAGATGGGATATCTAC 1071 Query 1080 CTCAGGGAATGGTTAACTATTTGGCACTCTTAGGTTGGGGAGATGGGACTGAAAATGAAT 1139 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1072 CTCAGGGAATGGTTAACTATTTGGCACTCTTAGGTTGGGGAGACGGGACTGAAAATGAAT 1131 Query 1140 TCTTCACACTCGAGGAACTTGTTGAAAAATTCTCGATCGAACGTGTCAACAAAAGTGGTG 1199 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | Sbjct 1132 TCTTCACACTCGAGGATCTTGTTGAAAAATTCTCGATTGAACGTGTCAACAAAAGTGGCG 1191 Query 1200 CGATTTTTGATTCAACAAAGTTAAGATGGATGAATGGTCAACATCTGAGGGCACTTCCAA 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 CGATTTTTGATTCAACAAAGTTAAGATGGATGAATGGTCAACATCTGAGGGCACTTCCAA 1251 Query 1260 AGGAAAAACTAACAAAACTTGTTGGTGAGCGATGGAAGAGTGCCGGTATCTTAACAGAAT 1319 | || ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 1252 ATGAGAAACTAACAAAACTTGTTGGTGAGCGATGGAAGAGCGCTGGTATCTTAACAGAAT 1311 Query 1320 CCGAGGGGAGTTTTGTAGATGAAGCAGTCGAGCTTCTCAAGGATGGGATTGAGTTGGTGA 1379 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1312 CCGAGGGGAGTTTTGTAAATGAAGCTGTCGAGCTTCTCAAGGATGGGATTGAGTTGGTGA 1371 Query 1380 CAGATTCAGACAAAGTACTTTTGAACTTGCTTTCATATCCTCTACACGCTACATTGGCTA 1439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1372 CAGATTCAGACAAAGTACTTTTGAACTTGCTTTCATATCCTCTACACGCTACATTGGCTA 1431 Query 1440 GCCCTGAAGCTAAGCCTGCCGTGGAAGACAAACTTCATGAAGTAGCAGCCAGCCTCATAG 1499 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1432 GCCCTGAAGCTAAGCCTGCTGTGGAAGACAAACTTCATGAAGTAGCAGCCAGCCTCATAG 1491 Query 1500 CTGCTTATGACAGCGGTGAGATTCCAAGCGCTTTAGAAGAAGGACAAGGTGCTTGGCAGA 1559 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1492 CTGCTTATGACAGCGGAGAGATTCCAAGCGCTTTAGAAGAAGGACAAGGTGCTTGGCAGA 1551 Query 1560 AATGGGTGAAAGCCTTTGGCAAATCATTGAAACGCAAAGGTAAATCACTTTTCATGCCAC 1619 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1552 AATGGGTGAAAGCCTTTGGCAAATCCTTGAAACGCAAAGGTAAATCACTTTTCATGCCAC 1611 Query 1620 TACGAGTGTTGTTAACGGGAAAACTCCATGGTCCTGAGATGGGCACCAGTATTGTTCTGA 1679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1612 TACGAGTGTTGTTAACGGGAAAACTCCATGGTCCTGAGATGGGCACCAGTATTGTTCTGA 1671 Query 1680 TTCACAAAGCTGGAAGTCCCGGTATAGTGGTTCCTCAGGCTGGGTTTGTATCCATGGAGG 1739 || |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| Sbjct 1672 TTTACAAAGCTGGAAGTCCTGGTATAGTGGTTCCTCAAGCTGGGTTTGTGTCCATGGAGG 1731 Query 1740 AACGGTTTAAAATTCTCAGGGAGATAGACTGGGAAGCTTTGAACAAAGATGAGAGTGTGC 1799 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1732 AACGGTTTAAGATTCTTAGGGAGATAGACTGGGAAGCTTTGAACAAAGATGAGAGTGTGC 1791 Query 1800 CTCTTGAATCTACAGCCACAGTATCAACCTGAGAGAACTCCCCTTTTCTATTTTT----- 1854 |||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct 1792 CTCTTGAATCTACAGCCACAGTATCAACCTGAGAAAACTCCCCTTTTTTTTTTTTTTTTT 1851 Query 1855 ----C-TTCAGT-TTTCGGTTAGTTGGTGAGA-AA-GACAGCCCAGAGATTTTGATTCCT 1906 | |||| | ||| ||||||||||||||| || |||||||||||||||||||||||| Sbjct 1852 TTTTCCTTCAATATTT-GGTTAGTTGGTGAGAGAAAGACAGCCCAGAGATTTTGATTCCT 1910 Query 1907 CGTGCATTTCTTGTTTCCCGAAACAAATGGCACAACGAAATTTGTAGATTATAATGTATC 1966 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1911 CGTGCATTTCTTGTTTCCCGAAACAAATGGCACAAAGAAATTTGTAGATTATAATGTATC 1970 Query 1967 AGCAAAG--------G-AACAAACCAGAGTGCTTGTAACATTATCAGGC 2006 ||||||| | |||||||||||| ||||||||||||||||||| Sbjct 1971 AGCAAAGCAAACTTAGGAACAAACCAGAGAGCTTGTAACATTATCAGGC 2019 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 99397079100 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5