BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496670
Length=2485
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64570.1 | Symbols: XYL4, ATBXL4 | beta-D-xylosidase 4 | chr... 3899 0.0
AT5G64572.1 | Symbols: | other RNA | chr5:25810298-25811733 FO... 2104 0.0
AT5G09730.1 | Symbols: BXL3, ATBXL3, XYL3, ATBX3, BX3 | beta-xy... 1400 0.0
> AT5G64570.1 | Symbols: XYL4, ATBXL4 | beta-D-xylosidase 4 | chr5:25810115-25813335
REVERSE LENGTH=2493
Length=2493
Score = 3899 bits (2111), Expect = 0.0
Identities = 2368/2492 (95%), Gaps = 17/2492 (1%)
Strand=Plus/Plus
Query 1 ATCCCAAGAAATCGAAACACAACGCAATGGGCTCTTCTTCTCCACTAACAAGGAGAAACA 60
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATCCCAAGAAATCGAAACACAAAGCAATGGGCTCTTCTTCTCCATTAACAAGGAGAAACA 60
Query 61 GAGCACCACCATCctctgtttcctctgtttttcttatctttctctgtttcttcctctact 120
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 61 GAGCACCACCATCCTCTGTTTCCTCTGTTTATCTAATCTTTCTCTGTTTCTTCCTCTACT 120
Query 121 ttttAGATTTATCAAACGCTCAATCATCGCCGGTTTTCGCCTGCGACGTAGCTGCAAACC 180
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTTTAAATTTCTCAAACGCTCAATCATCGCCGGTTTTCGCCTGCGACGTAGCTGCAAACC 180
Query 181 CTTCTCTCGCTGCATATGGATTCTGCAACACCGTTTTGAAGATCGAATACCGAGTCGCTG 240
|||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTTCTCTCGCCGCCTATGGTTTCTGCAACACCGTTTTGAAGATCGAATACCGAGTCGCTG 240
Query 241 ATCTGGTCGCGAGGCTTACGTTGCAAGAAAAGATTGGGTTTTTAGTGAGTAAAGCTAACG 300
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 241 ATCTGGTCGCGAGGCTCACGTTGCAAGAAAAGATCGGGTTTTTAGTGAGTAAAGCTAACG 300
Query 301 GCGTGACTCGGCTTGGGATTCCGACGTATGAATGGTGGTCGGAAGCACTCCACGGCGTTT 360
|||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 301 GCGTGACTCGTCTTGGGATTCCAACGTATGAATGGTGGTCTGAAGCACTTCACGGCGTTT 360
Query 361 CTTACATCGGACCCGGCACGCATTTTTCCAGCCAAGTTCCCGGAGCTACGAGTTTCCCGC 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 361 CTTACATCGGACCCGGCACGCATTTTTCTAGCCAAGTTCCCGGAGCTACGAGTTTCCCGC 420
Query 421 AGGTTATACTCACCGCCGCTTCTTTCAACGTATCTCTGTTTCAAGCCATTGGCAAGGTCG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AGGTTATACTCACCGCCGCTTCTTTCAACGTATCTCTGTTTCAAGCCATTGGCAAGGTCG 480
Query 481 TCTCGACGGAAGCGAGGGCAATGTACAACGTGGGATTAGCCGGACTAACGTATTGGTCAC 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TCTCAACGGAAGCGAGGGCAATGTACAACGTGGGATTAGCCGGACTAACGTATTGGTCAC 540
Query 541 CGAACGTGAACATATTCCGAGATCCAAGATGGGGAAGAGGACAAGAGACTCCAGGAGAAG 600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 541 CGAACGTGAACATATTCCGAGATCCAAGATGGGGAAGAGGGCAAGAGACTCCAGGAGAAG 600
Query 601 ATCCATTGCTCGCTAGCAAGTATGCTTCAGGGTACGTTAAGGGTCTCCAAGAGACTGACG 660
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 601 ATCCATTGCTCGCTAGTAAGTATGCTTCAGGGTACGTTAAGGGTCTTCAAGAGACTGACG 660
Query 661 CTGGCGATTCTAACCGCCTAAAAGTCGCCGCTTGCTGCAAACACTACACCGCTTACGACG 720
||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |
Sbjct 661 GTGGCGATTCTAACCGTCTCAAAGTCGCCGCCTGCTGCAAACACTATACCGCTTACGATG 720
Query 721 TCGATAATTGGAAAGGAGTAGAACGTTACAGTTTCAACGCCGTGGTGACTCAACAAGATA 780
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TCGATAATTGGAAAGGCGTAGAACGTTACAGTTTCAACGCCGTGGTGACTCAACAAGATA 780
Query 781 TGGATGATACGTATCAACCACCGTTCAAGAGCTGTGTGGTTGATGGGAATGTAGCGAGTG 840
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 781 TGGATGATACGTATCAACCACCGTTCAAGAGTTGTGTGGTTGATGGGAATGTGGCGAGTG 840
Query 841 TTATGTGTTCTTACAATCAAGTTAACGGCAAACCGACATGCGCTGATCCGGATCTGCTCT 900
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 841 TTATGTGTTCTTACAATCAAGTTAACGGCAAACCGACATGCGCTGATCCAGATCTGCTCT 900
Query 901 CTGGTGTTATCCGCGGTGAATGGAAATTAAATGGGTACATTGTTTCAGATTGTGATTCAG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CTGGTGTTATCCGCGGTGAATGGAAATTAAATGGGTACATTGTTTCAGATTGTGATTCAG 960
Query 961 TAGATGTGTTGTATAAGAACCAACACTATACCAAGACTCCAGCAGAAGCTGCAGCCATAT 1020
||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 961 TAGATGTCTTGTATAAGAACCAACACTATACAAAGACTCCAGCTGAAGCTGCAGCCATAT 1020
Query 1021 CTATATTGGCAGGTTTGGATTTAAACTGCGGTTCGTTCTTGGGTCAACATACAGAGGAAG 1080
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1021 CTATATTGGCAGGTTTGGATTTAAACTGTGGTTCATTCTTGGGTCAACATACAGAGGAAG 1080
Query 1081 CGGTTAAGTCGGGTTTGGTAAACGAGGCAGCTATCGATAAAGCGATTTCGAACAACTTTT 1140
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CAGTTAAGTCGGGTTTGGTAAACGAGGCAGCTATCGATAAAGCGATTTCGAACAACTTTT 1140
Query 1141 TGACCCTTATGCGTTTAGGATTCTTCGATGGTAATCCAAAGAACCAGATCTATGGTGGGT 1200
||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||
Sbjct 1141 TGACCCTTATGCGTTTAGGATTCTTTGATGGAAACCCAAAGAACCAAATCTATGGCGGGT 1200
Query 1201 TGGGTCCTACAGACGTTTGCACGTCTGCGAATCAAGAACTAGCGGCAGACGCGGCAAGAC 1260
| |||||||| |||||||||||||||||||||||||| ||||| ||||| || |||||||
Sbjct 1201 TAGGTCCTACCGACGTTTGCACGTCTGCGAATCAAGAGCTAGCAGCAGATGCAGCAAGAC 1260
Query 1261 AAGGCATTGTTCTACTCAAGAATACTGGATGCTTACCGCTATCTCCTAAATCGATCAAAA 1320
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1261 AAGGCATTGTTCTACTCAAGAATACTGGATGCTTACCGCTTTCTCCTAAATCGATCAAAA 1320
Query 1321 CACTAGCCGTGATTGGACCGAACGCGAATGTCACCAAGACAATGATCGGGAACTACGAAG 1380
||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||
Sbjct 1321 CACTAGCCGTGATTGGACCAAACGCGAATGTCACCAAAACAATGATTGGAAACTACGAAG 1380
Query 1381 GTACGCCGTGTAAATACACAACACCACTACAAGGATTAGCTGGGACGGTATCAACAACAT 1440
| ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||
Sbjct 1381 GCACGCCGTGTAAATACACAACACCACTACAAGGACTAGCCGGGACGGTATCTACAACAT 1440
Query 1441 ATCTACCAGGCTGCTCCAATGTAGCTTGTTCGGTAGCGGATGTAGCCGGTGCCACAAAAC 1500
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||
Sbjct 1441 ATCTACCAGGCTGCTCCAATGTAGCTTGTGCTGTAGCGGATGTAGCCGGCGCCACGAAAC 1500
Query 1501 TAGCCGCAACAGCAGATGTGACAGTGC-TGTTGATCGGTGCCGATCAATCAATCGAGGCA 1559
|||| || || ||||||||| | |||| || |||||||||||||||||||||||||||||
Sbjct 1501 TAGCAGCCACTGCAGATGTGTCTGTGCTTG-TGATCGGTGCCGATCAATCAATCGAGGCA 1559
Query 1560 GAGAGCCGAGACAGAGTCGACCTGAATCTTCCCGGACAGCAACAAGAGCTAGTGATCCAA 1619
|||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||
Sbjct 1560 GAGAGCCGAGACAGAGTCGACCTGCATCTTCCTGGACAGCAACAAGAGCTGGTGATCCAA 1619
Query 1620 GTGGCTAAAGCAGCAAAAGGACCGGTCTTGCTCGTCATTATGTCCGGTGGAGGTTTCGAC 1679
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 GTGGCTAAAGCAGCAAAAGGACCGGTCTTGCTCGTCATTATGTCCGGTGGAGGTTTCGAT 1679
Query 1680 ATTACATTCGCTAAGAATGACCCAAAGATCGCCGGAATTTTGTGGGTTGGTTATCCCGGA 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 ATTACATTCGCTAAGAATGACCCAAAGATCGCCGGAATTTTGTGGGTTGGTTATCCCGGA 1739
Query 1740 GAAGCCGGTGGTATCGCCATTGCTGATATCATCTTTGGCCGTTATAGTCCAAGTGG-AAG 1798
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1740 GAAGCCGGTGGTATCGCCATTGCTGATATCATCTTTGGCCGTTATAATCCAAGTGGGAA- 1798
Query 1799 ATTACCGATGACTTGGTATCCACAGTCGTATGTAGAGAAAGTTCCGATGACAATTATGAA 1858
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1799 ATTACCGATGACGTGGTATCCACAGTCGTATGTAGAGAAAGTTCCGATGACAATAATGAA 1858
Query 1859 CATGAGACCCAATAAATCAAACGGGTATCCGGGTCGGACTTACAGATTCTACACCGGAGA 1918
|||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1859 CATGAGACCCGATAAAGCAAGCGGGTATCCGGGTCGGACTTACCGATTCTACACCGGAGA 1918
Query 1919 AACAGTTTACGCCTTCGGAGATGGACTCAGCTACACCACATTCAGTCATAGCTT-AGTCA 1977
|||||| ||||| ||||||||||||||||||||||||| ||||||||| | ||| |||||
Sbjct 1919 AACAGTATACGCATTCGGAGATGGACTCAGCTACACCAAATTCAGTCACA-CTTTAGTCA 1977
Query 1978 AAGCTCCAAGTCTCGTTTCTCTCAGTCTTGAAGAGAATCACGTTTGCCGATCATCGGAAT 2037
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1978 AAGCTCCAAGTCTCGTTTCTCTCGGTCTCGAAGAGAATCACGTTTGCCGATCATCGGAAT 2037
Query 2038 GTCAATCGCTGGACGCAATCGGACCGCACTGCGAAAACGCTGTCTCGGGCGGAGGATCTG 2097
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 2038 GTCAATCGCTAGACGCGATCGGACCGCACTGCGAAAACGCTGTCTCCGGCGGTGGATCGG 2097
Query 2098 CGTTTGAGGTTCAGATTAAGGTACGAAACGGAGGAGATAGAGAAGGGATTCACACGGTGT 2157
||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2098 CGTTTGAAGTTCATATCAAGGTACGAAACGGAGGAGATAGAGAAGGGATTCACACGGTGT 2157
Query 2158 TTCTATTCACGACGCCGCCGGCGATTCACGGATCGCCGAGGAAGCATTTGTTAGGATTTG 2217
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 2158 TTCTATTCACGACGCCGCCGGCGATTCACGGATCGCCGAGGAAGCATTTGGTAGGATTCG 2217
Query 2218 AGAAGATTCGATTGGGGAAGATGGAAGAAGCGGTGGTTAGGTTTAAGGTAGAGGTGTGCA 2277
||||||||||||||||||||| ||||||||||||||||||||||||||||||| | || |
Sbjct 2218 AGAAGATTCGATTGGGGAAGAGGGAAGAAGCGGTGGTTAGGTTTAAGGTAGAGATATGTA 2277
Query 2278 AAGATCTGAGTGTTGTTGATGAGATTGGGAAGAGGAAGATTGGTTTGGGAAAGCATCTTC 2337
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2278 AAGATCTGAGTGTGGTTGATGAGATTGGGAAGAGGAAGATTGGTTTGGGAAAGCATCTTC 2337
Query 2338 TTCATGTCGGCGATTTGAAACATTCCTTAAGCATTAGGATCTGATTCTAAtttttttttt 2397
|||||||||| ||||| |||||||||||||||||||| ||||||||||| | ||||| ||
Sbjct 2338 TTCATGTCGGAGATTTAAAACATTCCTTAAGCATTAGAATCTGATTCTA-TATTTTTATT 2396
Query 2398 ctttttATTTGA-GaaaaaaaGAATTTTAATATGCTTAAGCTTTTGCAAGTTGGaaaaaa 2456
| | || |||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2397 -TG---AG--GAAGAAAAAAAGAATATTAATATGCTTAAGCTTTTGCAAGTTGGAAAAGA 2450
Query 2457 aaag-aataaaaaaCA-AA-TTGTGAATCTCT 2485
|||| ||||||||| | || ||||||||||||
Sbjct 2451 AAAGTAATAAAAAAAAGAAATTGTGAATCTCT 2482
> AT5G64572.1 | Symbols: | other RNA | chr5:25810298-25811733
FORWARD LENGTH=1366
Length=1366
Score = 2104 bits (1139), Expect = 0.0
Identities = 1295/1371 (94%), Gaps = 8/1371 (1%)
Strand=Plus/Minus
Query 943 TTTCAGATTGTGATTCAGTAGATGTGTTGTATAAGAACCAACACTATACCAAGACTCCAG 1002
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1366 TTTCAGATTGTGATTCAGTAGATGTCTTGTATAAGAACCAACACTATACAAAGACTCCAG 1307
Query 1003 CAGAAGCTGCAGCCATATCTATATTGGCAGGTTTGGATTTAAACTGCGGTTCGTTCTTGG 1062
| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1306 CTGAAGCTGCAGCCATATCTATATTGGCAGGTTTGGATTTAAACTGTGGTTCATTCTTGG 1247
Query 1063 GTCAACATACAGAGGAAGCGGTTAAGTCGGGTTTGGTAAACGAGGCAGCTATCGATAAAG 1122
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1246 GTCAACATACAGAGGAAGCAGTTAAGTCGGGTTTGGTAAACGAGGCAGCTATCGATAAAG 1187
Query 1123 CGATTTCGAACAACTTTTTGACCCTTATGCGTTTAGGATTCTTCGATGGTAATCCAAAGA 1182
||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 1186 CGATTTCGAACAACTTTTTGACCCTTATGCGTTTAGGATTCTTTGATGGAAACCCAAAGA 1127
Query 1183 ACCAGATCTATGGTGGGTTGGGTCCTACAGACGTTTGCACGTCTGCGAATCAAGAACTAG 1242
|||| |||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 1126 ACCAAATCTATGGCGGGTTAGGTCCTACCGACGTTTGCACGTCTGCGAATCAAGAGCTAG 1067
Query 1243 CGGCAGACGCGGCAAGACAAGGCATTGTTCTACTCAAGAATACTGGATGCTTACCGCTAT 1302
| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1066 CAGCAGATGCAGCAAGACAAGGCATTGTTCTACTCAAGAATACTGGATGCTTACCGCTTT 1007
Query 1303 CTCCTAAATCGATCAAAACACTAGCCGTGATTGGACCGAACGCGAATGTCACCAAGACAA 1362
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1006 CTCCTAAATCGATCAAAACACTAGCCGTGATTGGACCAAACGCGAATGTCACCAAAACAA 947
Query 1363 TGATCGGGAACTACGAAGGTACGCCGTGTAAATACACAACACCACTACAAGGATTAGCTG 1422
|||| || ||||||||||| ||||||||||||||||||||||||||||||||| |||| |
Sbjct 946 TGATTGGAAACTACGAAGGCACGCCGTGTAAATACACAACACCACTACAAGGACTAGCCG 887
Query 1423 GGACGGTATCAACAACATATCTACCAGGCTGCTCCAATGTAGCTTGTTCGGTAGCGGATG 1482
|||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 886 GGACGGTATCTACAACATATCTACCAGGCTGCTCCAATGTAGCTTGTGCTGTAGCGGATG 827
Query 1483 TAGCCGGTGCCACAAAACTAGCCGCAACAGCAGATGTGACAGTGC-TGTTGATCGGTGCC 1541
||||||| ||||| |||||||| || || ||||||||| | |||| || |||||||||||
Sbjct 826 TAGCCGGCGCCACGAAACTAGCAGCCACTGCAGATGTGTCTGTGCTTG-TGATCGGTGCC 768
Query 1542 GATCAATCAATCGAGGCAGAGAGCCGAGACAGAGTCGACCTGAATCTTCCCGGACAGCAA 1601
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 767 GATCAATCAATCGAGGCAGAGAGCCGAGACAGAGTCGACCTGCATCTTCCTGGACAGCAA 708
Query 1602 CAAGAGCTAGTGATCCAAGTGGCTAAAGCAGCAAAAGGACCGGTCTTGCTCGTCATTATG 1661
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 CAAGAGCTGGTGATCCAAGTGGCTAAAGCAGCAAAAGGACCGGTCTTGCTCGTCATTATG 648
Query 1662 TCCGGTGGAGGTTTCGACATTACATTCGCTAAGAATGACCCAAAGATCGCCGGAATTTTG 1721
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 TCCGGTGGAGGTTTCGATATTACATTCGCTAAGAATGACCCAAAGATCGCCGGAATTTTG 588
Query 1722 TGGGTTGGTTATCCCGGAGAAGCCGGTGGTATCGCCATTGCTGATATCATCTTTGGCCGT 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TGGGTTGGTTATCCCGGAGAAGCCGGTGGTATCGCCATTGCTGATATCATCTTTGGCCGT 528
Query 1782 TATAGTCCAAGTGGAAGATTAC-CGATGACTTGGTATCCACAGTCGTATGTAGAGAAAGT 1840
|||| ||||||| |||| || ||||||| |||||||||||||||||||||||||||||
Sbjct 527 TATAATCCAAGT--AAGAG-ACTCGATGACGTGGTATCCACAGTCGTATGTAGAGAAAGT 471
Query 1841 TCCGATGACAATTATGAACATGAGACCCAATAAATCAAACGGGTATCCGGGTCGGACTTA 1900
|||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct 470 TCCGATGACAATAATGAACATGAGACCCGATAAAGCAAGCGGGTATCCGGGTCGGACTTA 411
Query 1901 CAGATTCTACACCGGAGAAACAGTTTACGCCTTCGGAGATGGACTCAGCTACACCACATT 1960
| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct 410 CCGATTCTACACCGGAGAAACAGTATACGCATTCGGAGATGGACTCAGCTACACCAAATT 351
Query 1961 CAGTCATAGCTT-AGTCAAAGCTCCAAGTCTCGTTTCTCTCAGTCTTGAAGAGAATCACG 2019
|||||| | ||| |||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 350 CAGTCACA-CTTTAGTCAAAGCTCCAAGTCTCGTTTCTCTCGGTCTCGAAGAGAATCACG 292
Query 2020 TTTGCCGATCATCGGAATGTCAATCGCTGGACGCAATCGGACCGCACTGCGAAAACGCTG 2079
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 291 TTTGCCGATCATCGGAATGTCAATCGCTAGACGCGATCGGACCGCACTGCGAAAACGCTG 232
Query 2080 TCTCGGGCGGAGGATCTGCGTTTGAGGTTCAGATTAAGGTACGAAACGGAGGAGATAGAG 2139
|||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||||||||
Sbjct 231 TCTCCGGCGGTGGATCGGCGTTTGAAGTTCATATCAAGGTACGAAACGGAGGAGATAGAG 172
Query 2140 AAGGGATTCACACGGTGTTTCTATTCACGACGCCGCCGGCGATTCACGGATCGCCGAGGA 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 AAGGGATTCACACGGTGTTTCTATTCACGACGCCGCCGGCGATTCACGGATCGCCGAGGA 112
Query 2200 AGCATTTGTTAGGATTTGAGAAGATTCGATTGGGGAAGATGGAAGAAGCGGTGGTTAGGT 2259
|||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 111 AGCATTTGGTAGGATTCGAGAAGATTCGATTGGGGAAGAGGGAAGAAGCGGTGGTTAGGT 52
Query 2260 TTAAGGTAGAGGTGTGCAAAGATCTGAGTGTTGTTGATGAGATTGGGAAGA 2310
||||||||||| | || |||||||||||||| |||||||||||||||||||
Sbjct 51 TTAAGGTAGAGATATGTAAAGATCTGAGTGTGGTTGATGAGATTGGGAAGA 1
> AT5G09730.1 | Symbols: BXL3, ATBXL3, XYL3, ATBX3, BX3 | beta-xylosidase
3 | chr5:3015247-3018262 REVERSE LENGTH=2430
Length=2430
Score = 1400 bits (758), Expect = 0.0
Identities = 1810/2305 (79%), Gaps = 123/2305 (5%)
Strand=Plus/Plus
Query 140 TCAATCATCGCCGGTTTTCGCCTGCGACGT-AGCTGCAAACCCTTCTCTCG-C-TGCATA 196
||| || || || || |||||||| ||||| | | | |||||||||||| | | || |
Sbjct 120 TCAGTCTTCTCCAGTCTTCGCCTGTGACGTCA-CCGGAAACCCTTCTCTTGCCGGGC-T- 176
Query 197 TGGATTCTGCAACACCGTTTTGAAG-ATCGAATACCGAGTCGCTGATCTGGTCGCGAGGC 255
| ||||||||||| | | ||| || ||| || ||||||| | ||||| |||| || |
Sbjct 177 TAGATTCTGCAACGCGGGGTTG-AGTATCAAAGCCCGAGTCACCGATCTTGTCG-GAAGA 234
Query 256 TT-ACGTTGCAAGA-AAAGATTGGGTTTTTAG-TGAGTAAAGCTAACGGCGTGA-CTCGG 311
|| |||||| | || ||| || |||||||| | || ||||||| |||||| | | ||
Sbjct 235 TTGACGTTGGAGGAGAAA-ATCGGGTTTTT-GACCAGCAAAGCTATCGGCGTTAGC-CGC 291
Query 312 CTTGGGATTCCGACGTATGAATGGTGGTCGGAAGCACTCCACGGCGTTTCTTACATCGGA 371
|||||||||||| | || ||||||||||||| ||||| || ||||| ||| || |||||
Sbjct 292 CTTGGGATTCCGTCTTACAAATGGTGGTCGGAGGCACTTCATGGCGTCTCTAACGTCGGA 351
Query 372 CCCGGCACG-CATTTTTCCAGCCAAGTTCCC-GGAGCTACGAGTTTCCCGCAGGTTATAC 429
|| | | | || || | |||| |||| || || || || ||||| || |||||||
Sbjct 352 GGTGGTA-GTCGGTTCACCGGTCAAG-TCCCTGGCGCCACTAGCTTCCCACAAGTTATAC 409
Query 430 TCACCGCCGCTTCTTTCAACGTATCTCTGTTTCAAGCCATTGGCAAGGTCGTCTCGACGG 489
|||| |||||||||||||| || ||| |||| ||||||||||||||||| || ||||| |
Sbjct 410 TCACGGCCGCTTCTTTCAATGTGTCTTTGTTCCAAGCCATTGGCAAGGTTGTATCGACAG 469
Query 490 AAGCGAGGGCAATGTACAACGTGGGATTAGCCGGACTAACGTATTGGTCACCGAACGTGA 549
| ||||||||||||||||| ||||||| |||||| |||||| ||||||||| || ||||
Sbjct 470 AGGCGAGGGCAATGTACAATGTGGGATCAGCCGGTTTAACGTTTTGGTCACCTAATGTGA 529
Query 550 ACATATTCCGAGATCCAAGATGGGGAAGAGGACAAGAGACTCCAGGAGAAGATCCATTGC 609
|||||||||| || || |||||||||||||||||||||||||| || || || ||| |
Sbjct 530 ACATATTCCGGGACCCGAGATGGGGAAGAGGACAAGAGACTCCCGGTGAGGACCCAACAC 589
Query 610 TCGCTAGCAAGTATGCTTCAG-GG--TACGTTAAGGGTCTCCAAGAGACTGACGCTGGCG 666
|| | ||||| || | ||| || |||||||| ||||| || |||||||||| ||| |
Sbjct 590 TCTCAAGCAA--ATAC-GCAGTGGCCTACGTTAAAGGTCTTCAGGAGACTGACGGTGGAG 646
Query 667 ATTCTAACCGCCTAAAAGTCGCCGCTTGCTGCAAACACTACACCGCTTACGACGTCGATA 726
|| ||||||| || |||||||| ||||||||||||||||||||||| || || | || |
Sbjct 647 ATCCTAACCGTCTCAAAGTCGCTGCTTGCTGCAAACACTACACCGCCTATGATATTGACA 706
Query 727 ATTGGA-AAGGA-GTAGAA-CGT-TACAGTTTCAACGCCGTGGT-GACTCAACAAGATAT 781
|||||| || | || || ||| | || ||||||||| ||||| || ||||||||| |
Sbjct 707 ATTGGAGAA--ATGT-CAATCGTCT-CACTTTCAACGCTGTGGTAAAC-CAACAAGATCT 761
Query 782 GGATGATACGTATCAACCACCGTTCAAGAGCTGTGTGGTTGATGGGAATGTAGCGAGTGT 841
|| |||||||| |||||||||||||||||||||||||||||||||| |||| || |||||
Sbjct 762 GGCTGATACGTTTCAACCACCGTTCAAGAGCTGTGTGGTTGATGGGCATGTTGCTAGTGT 821
Query 842 TATGTGTTCTTACAATCAAGTTAACGGCAAACCGACATGCGCTGATCCGGATCTGCTCTC 901
|||||||||||||| ||||||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct 822 CATGTGTTCTTACAACCAAGTTAACGGTAAACCAACATGTGCCGATCCTGATCTGCTTTC 881
Query 902 TGGTGTTATCCGCGGTGAATGGAAATTAAATGGGTACATTGTTTCAGATTGTGATTCAGT 961
||||| |||||||| ||||| | | || || ||||||||||| ||||||||||| ||
Sbjct 882 CGGTGTGATCCGCGGACAATGGCAGCTCAACGGATACATTGTTTCGGATTGTGATTCGGT 941
Query 962 AGATGTGTTGTATAAGAAC-CAACACTATACCAAGACTCCAGCAGAAGCTGCAGCCATAT 1020
||||||||||| | |||| ||||||||| | |||||||||| |||||||| |||| ||
Sbjct 942 AGATGTGTTGT-TCAGAAAACAACACTATGCTAAGACTCCAGAAGAAGCTGTGGCCAAAT 1000
Query 1021 CTATATTGGCAGGTTTGGATTTAAACTGCGGTTCGTT-CT-TGGGTCAACATACAGA-GG 1077
|| ||||||||||||||||||| || || | | | || | ||| |||||| | || ||
Sbjct 1001 CTCTATTGGCAGGTTTGGATTTGAATTGTGAT-CATTTCAATGG-TCAACACGC-GATGG 1057
Query 1078 AAGCGGTTAAGTCGGGTTTGGTAAACGAGGCAGCTATCGATAAAGCGATTTCGAACAACT 1137
|||||| ||| |||||||||||||||| ||||||| || ||||||||||| ||||| |
Sbjct 1058 GAGCGGTCAAGGCGGGTTTGGTAAACGAAACAGCTATTGACAAAGCGATTTCAAACAA-T 1116
Query 1138 TTTT-GACCCTTATGCGTTTAGGATTCTTCGATGGTA-ATCCAAAGAACCAGATCTATGG 1195
|| ||| || ||||||||||| ||||||||||| | | || ||||| ||| |||| ||
Sbjct 1117 TTCGCGACTCTGATGCGTTTAGGGTTCTTCGATGG-AGACCCTAAGAAGCAGCTCTACGG 1175
Query 1196 TGGG-TTGGGTCCTACAG-ACGTTTGCAC-GTCTGCGAATCAAGAACTAGCG-GCAGACG 1251
||| |||| ||||| || | |||||||| | ||| || |||||||| || | ||| |
Sbjct 1176 TGGTCTTGG-TCCTA-AGGATGTTTGCACCG-CTGATAACCAAGAACTCGCAAG-AGATG 1231
Query 1252 -CGGCAAGACAAGGCATTGTTCTA-CTCAAGAA-TA--CTGGAT-GCTTACCGCTATCTC 1305
|| |||||||||||||||| || || ||||| | |||| | |||| ||||| || |
Sbjct 1232 GCG-CAAGACAAGGCATTGT-CTTGCTTAAGAACTCTGCTGGTTCGCTT-CCGCTCTCAC 1288
Query 1306 CTAAATCGATCAAAACACTAGCCGTGATTGGACCGAACGCGAATGTCACC-AAGACAATG 1364
|| | ||||||||| |||||||||| ||||| ||||| |||| ||| || ||||||
Sbjct 1289 CTTCCGCAATCAAAACATTAGCCGTGATCGGACCAAACGCCAATGCCACAGAA-ACAATG 1347
Query 1365 ATCGGGAACTACGAAGGTACGCCGTGTAAATACACAACACCACTACAAGGATTAGCTGGG 1424
||||| |||||| | ||| || || || |||||||| || || || ||||| || |
Sbjct 1348 ATCGGAAACTACCACGGTGTACCATGCAAGTACACAACGCCGCTTCAGGGATTGGCAGAA 1407
Query 1425 ACGGTATCAACAACATATCTACCAGGCTGCTCCAATGTAGCTTGT-TCGGTAGCGGATGT 1483
||||| || | || |||| || || || | || || ||||| | | | |||||| |
Sbjct 1408 ACGGTGTCGTCTACCTATCAACTGGGATG-T--AACGTGGCTTGCGTAGAT-GCGGATAT 1463
Query 1484 AGCCGGTGCCACAAAACTAGCCGCAACAGCAGATG-TGACAGTGCT-GTTGATCGGTGCC 1541
|| | ||| | || || || | || |||| || ||||| || | | || ||
Sbjct 1464 AGGCTCAGCCGTGGATCTGGCTGCTTCTGCGGATGCTGTT-GTGCTCGTGG-TGGGCGCA 1521
Query 1542 GATCAATCAATCGAG-GCAGAGAGCCGA-GACAGAGTCGACCTGAATCTTCCCGGACAGC 1599
|| |||||||| ||| | ||| ||| | ||| ||||||||||| ||||||| ||| |||
Sbjct 1522 GACCAATCAATTGAGAGG-GAGGGCC-ATGACCGAGTCGACCTGTATCTTCCTGGAAAGC 1579
Query 1600 AACAAGAGCTAGTGA-TCCAAGTGGCTAAAGCAGCAAAAGGACCGGTCTTGCTCGTCATT 1658
| |||||||| |||| || | || |||| ||||||| ||||||||| |||| || ||
Sbjct 1580 AGCAAGAGCTTGTGACTCGA-GTTGCTATGGCAGCAAGAGGACCGGTGGTGCTAGTTATC 1638
Query 1659 ATGTCCGGTGGAGG-TTTCGACATTACATTCGCTAAGAATGACCCAAAGATCGCCGGAAT 1717
|||||||||||||| ||| |||||||||||||| |||||||| ||||||| | | ||
Sbjct 1639 ATGTCCGGTGGAGGATTT-GACATTACATTCGCCAAGAATGATAAAAAGATCACAAGCAT 1697
Query 1718 TTTGTGGGTTGGTTATCCC-GGAGAAGCCGGTGGTATCGCCATTGCTGATATCATCTTTG 1776
||||||| || || ||| || |||||||||||| ||||||||||||| | ||||| |
Sbjct 1698 AATGTGGGTCGGATA-CCCTGGTGAAGCCGGTGGTCTCGCCATTGCTGACGTTATCTTCG 1756
Query 1777 GCCGTTATAGTCCAAGTGGAAGATTA-CCGATGACTTGGTATCCACAGTCGTATGTAGAG 1835
| ||| ||| ||| ||||||| ||| |||||||| |||||||| || ||||| || ||
Sbjct 1757 GACGTCATAATCCGAGTGGAA-ATTTGCCGATGACGTGGTATCCTCAATCGTACGTGGAA 1815
Query 1836 AAAGTTCCGATGACAATTATGAACATGAGACCCAATAAATCAAACGGGTATCCGGGTCGG 1895
|||||||||||| ||| |||||||||||||||| | |||||||| |||||||||||||||
Sbjct 1816 AAAGTTCCGATGTCAAATATGAACATGAGACCCGACAAATCAAAGGGGTATCCGGGTCGG 1875
Query 1896 ACTTACAGATTCTACACCGGAGAAACAGTTTACGCCTTCGGAGATG-GACTCAGCTACAC 1954
| |||||| || |||||||||||||| || |||||||||| ||| | | || | ||||||
Sbjct 1876 AGTTACAGGTTTTACACCGGAGAAACCGTATACGCCTTCGCAGACGCG-CTTACCTACAC 1934
Query 1955 CACATTCAGTC-AT-AGCTTAGTCAAAGCTCCAAGTCTCGTTTCTCTCAGTCTTGAAGAG 2012
| |||| | | || |||| | ||||||| ||||| ||||| ||||||||||| || |||
Sbjct 1935 TAAATTC-GACCATCAGCTAA-TCAAAGCGCCAAGACTCGTCTCTCTCAGTCTCGACGAG 1992
Query 2013 AATCACGTTTGCCGATCATCGGAATGTCAATCGCTGGACGCAATCGGACCGCACTGCGAA 2072
|| ||| ||||||||||||||| || ||||| ||||||| |||||||| ||||||||
Sbjct 1993 AACCACCCTTGCCGATCATCGGAGTGCCAATCTTTGGACGCGATCGGACCTCACTGCGAG 2052
Query 2073 AACGCTGTCTCGGGCGGAGGATCTGCGTTT-GAGGTTCAGATT-AAGGTAC-GAA-ACGG 2128
||||| || | | | |||||||| | ||| |||||||| || || ||| ||| || |
Sbjct 2053 AACGCCGT-T-GAG-GGAGGATCGGA-TTTCGAGGTTCAT-TTGAATGTAAAGAACACCG 2107
Query 2129 AGGAGATAGAGAAGGGATTC-ACACGGTGTTTCTATTCACGACGCCGCCGGCGATT-CAC 2186
| ||| |||| |||| | ||||||||||||| ||||||||| ||||| | | | |||
Sbjct 2108 -G-AGACAGAGC-GGGAAGCCACACGGTGTTTCTGTTCACGACGTCGCCG-CAAGTACAC 2163
Query 2187 GGATCGCCGAGGAAGCATTTGTTAGGATTTGAGAAGATTCGAT-TGGGGAAGA-TGGAAG 2244
||||| |||| ||||| | ||||||||||||||||||| | |||| |||| || |||
Sbjct 2164 GGATCTCCGATTAAGCAACTACTAGGATTTGAGAAGATTCG-TCTGGGAAAGAGTG-AAG 2221
Query 2245 AAGCGGTGGTTAGGTTTAAGGT-AGAGGTGTGCAAAGATCTGAGTGTTGTTGATGAGATT 2303
||||||||||||||||||| || | | ||||| || ||||||||||| ||||||||||
Sbjct 2222 AAGCGGTGGTTAGGTTTAACGTCA-ATGTGTGTAAGGATCTGAGTGTGGTTGATGAGACC 2280
Query 2304 GGGAAGAGGAAGATTG-GTTTGGGAAAGCATCTTCTTCATGTCGGC-GATTTGAAACATT 2361
||||||||||| || | ||| || | |||||||| ||||| || | || |||||| |
Sbjct 2281 GGGAAGAGGAAAATCGCGTTAGGTCAT-CATCTTCTCCATGTAGGAAGCTT-GAAACACT 2338
Query 2362 CCTT-AAGCATTAG-GATCTGATTC 2384
| || || |||||| | | ||||||
Sbjct 2339 CTTTGAA-CATTAGTGTT-TGATTC 2361
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123310345894
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5