BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg496704
Length=2367
Score E
Sequences producing significant alignments: (Bits) Value
AT5G64840.1 | Symbols: GCN5, ATGCN5 | general control non-repre... 3435 0.0
AT5G09930.1 | Symbols: ATGCN2, GCN2 | ABC transporter family pr... 1751 0.0
> AT5G64840.1 | Symbols: GCN5, ATGCN5 | general control non-repressible
5 | chr5:25916723-25919810 REVERSE LENGTH=2429
Length=2429
Score = 3435 bits (1860), Expect = 0.0
Identities = 2091/2201 (95%), Gaps = 22/2201 (1%)
Strand=Plus/Plus
Query 25 TCTGcttcttcttcttcttcttcGGTAGAG-GAAGATTCTCTCGCG--AGAGATTGCTCA 81
|||||| |||||||||||||||| |||||| | ||||||||||||| || |||
Sbjct 51 TCTGCTGCTTCTTCTTCTTCTTCAGTAGAGCG-AGATTCTCTCGCGCTCTCTATCGCT-- 107
Query 82 ACTTCTCTCCATGGGCTTATCAACAAATCTCCATAGCCTCGACCTCCGTTCAACATTCTT 141
|| | | ||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 108 ACATATAACCATGGGTTTATCAACGAATCTCCATAGCCTCGACCTCCGTTCAACTTTCTT 167
Query 142 CACCGGTCTCCGTCCTTGTCCATCTCCAATCCCTTCCAATTTCATCAAAATCTCTTCCAT 201
|||||| | | | | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 168 CACCGG--T-C-TAC--GTACATCTCCAATCCCTTCCAATTTCATCAAAATCTCTTCCAT 221
Query 202 TTCCAACCCTAGACGCGGA-ATCTCCACCATCAGAGCCCAAGTTTCCACCATCAGCCTCG 260
|||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||
Sbjct 222 TTCCAACCCTAGACGC-GATATCTCCACCATCAGAGCCCAAGTCTCCACCATCAGCCTCG 280
Query 261 AGACCTCCGTTAAAGAGCGTCAAGACGAAATCGAATCGCTTTTCTCGAAACCAA-CCTC- 318
|||||||||||||| |||||||||||||||||||||| ||||||||| || ||| ||||
Sbjct 281 AGACCTCCGTTAAACAGCGTCAAGACGAAATCGAATCTCTTTTCTCG-AAGCAACCCTCT 339
Query 319 CGAACAAGACTCCGACCGGAGACGAAACGGGAAGAATTCCAAAAACGGAGCTTCTGGGAT 378
| | ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 340 C-AGCAAGACTCCGATCGGAAACGAAACGGGAAGAGTTCCAAAAACGGAGCTTCTGGGAT 398
Query 379 TTCGTCAGGTGTGAAGCTAGAGAACATAAGGAAGAGCTACAAAGGCGTGACTGTGCTTAA 438
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 399 ATCTTCAGGTGTGAAGCTAGAGAACATAAGGAAAAGCTACAAAGGCGTGACTGTGCTTAA 458
Query 439 AGATGTGACCTGGGAAGTGAAAAGGGGTGAGAAAGTAGGGTTAGTGGGAGTGAACGGAGC 498
||||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct 459 AGATGTGACATGGGAAGTGAAGAGAGGTGAGAAAGTAGGGTTAGTTGGTGTGAACGGAGC 518
Query 499 TGGGAAGACGACTCAGCTCAGGATTATCACTGGTCAAGAAGAGCCTGATTCAGGTAACGT 558
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 519 TGGGAAGACGACTCAGCTCAGGATTATCACTGGTCAAGAAGAGCCTGATTCTGGTAACGT 578
Query 559 AATCAAGGCCAAACCCAATATGAAAATAGCTTTCTTGAGCCAGGAATTTGAGGTTTCGAT 618
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 579 AATCAAGGCCAAACCCAATATGAAAGTAGCTTTCTTGAGCCAGGAATTTGAGGTTTCGAT 638
Query 619 GAGTAAGACGGTGAGGGAAGAGTTCATGAGTGCTTTTAAGGAAGAGATGGAGATCACTGA 678
||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct 639 GAGTAAGACTGTGAGGGAAGAGTTCATGACTGCTTTCAAGGAAGAGATGGAGATTACTGA 698
Query 679 GAAGCTTGAGAAAGTTCAGAAGGCTATTGAAGGATCTGTTGATGATTTGGATCTTATGGG 738
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 699 GAAGCTTGAGAAAGTTCAGAAGGCTATTGAGGGATCTGTTGATGATTTGGATCTTATGGG 758
Query 739 AAGGTTATTAGATGAATTTGATTTGTTGCAGAGACGAGCTCAGGCTGTGAATTTGGATTC 798
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 759 AAGGTTATTAGATGAATTTGATTTGTTGCAGAGACGAGCTCAGGCTGTGAATTTAGATTC 818
Query 799 CGTTGATGCTAAGATTAGTAAGTTGATGCCGGAATTAGGTTTTGCCT-CAGAGGATGCTG 857
||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||
Sbjct 819 CGTTGATGCTAAGATTAGTAAGTTGATGCCGGAATTAGGGTTTG-CTCCTGAGGATGCTG 877
Query 858 ATAGGCTTGTGGCTTCCTTTAGTGGTGGATGGCAAATGAGAATGTCACTTGGAAAGATTT 917
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 ATAGGCTTGTGGCTTCGTTTAGTGGTGGATGGCAAATGAGAATGTCACTTGGAAAGATTT 937
Query 918 TGCTTCAGGATCCAGATTTGCTGCTTCTTGATGAGCCGACCAACCATTTGGATCTTGATA 977
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 938 TGCTTCAGGATCCAGATTTGCTGCTACTTGATGAGCCGACAAATCATTTGGATCTTGATA 997
Query 978 CTATTGAGTGGCTTGAAGGTTATTTGCAGAAGCAAGATGTGCCTATGGTTATTATTTCAC 1037
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 998 CTATTGAGTGGCTTGAAGGTTATTTGCAAAAGCAAGATGTGCCTATGGTTATTATTTCAC 1057
Query 1038 ATGACAGAGCCTTTCTTGATCAGTTATGTACTAAAATTGTGGAAACTGAGATGGGTGTGT 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 ATGACAGAGCCTTTCTTGATCAGTTATGTACTAAAATTGTGGAAACTGAGATGGGTGTGT 1117
Query 1098 CCAGGACATTTGAGGGTAATTATTCTCAGTATGTGATCTCAAAGGCAGAGTGGATCGAAA 1157
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1118 CCAGGACATTTGAGGGTAATTATTCTCAGTATGTGATCTCAAAGGCTGAGTGGATCGAAA 1177
Query 1158 CTCAGAATGCAGCTTGGGAAAAGCAACAGAAAGAGATCGATTCAACTAAGGACTTGATCG 1217
||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1178 CTCAGAATGCAGCGTGGGAAAAGCAACAGAAAGATATCGACTCAACTAAGGACTTGATCG 1237
Query 1218 CTAGGCTTGGTGCTGGTGCCAATTCTGGTCGTGCTTCTACTGCAGAAAAGAAACTAGAGA 1277
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1238 CCAGGCTTGGTGCTGGTGCCAATTCTGGTCGTGCTTCCACTGCAGAAAAGAAACTAGAGA 1297
Query 1278 AGCTTCAAGAACAGGAGCTAATAGAAAAGCCATTTCAGCGGAAACAGATGAAGATAAGGT 1337
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct 1298 AGCTTCAAGAACAGGAGCTAATAGAGAAGCCATTTCAGCGGAAGCAGATGAAGATTAGGT 1357
Query 1338 TTCCAGAGCGTGGAACAAGTGGAAGATCGGTAGTCAATGTTAAAAACATTGATTTTGGTT 1397
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 TTCCAGAGCGTGGGACAAGTGGAAGATCGGTAGTCAATGTTAAAAACATTGATTTTGGTT 1417
Query 1398 TCGAGGATAAGATGCTATTTAAGAAGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCG 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1418 TCGAGGATAAGATGCTATTTAAGAAGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCG 1477
Query 1458 CCATTATTGGCCCGAACGGTTGCGG-AAAGAGTACGTTATTGAAGTTAATTATGGGTTTA 1516
|||| |||| || |||||||| || ||| ||||||||||||||| ||||||||||||||
Sbjct 1478 CCATCCTTGGGCCAAACGGTTGTGGGAAA-AGTACGTTATTGAAGCTAATTATGGGTTTA 1536
Query 1517 GAAAAGCCTATGAAAGGTGAAGTTATTCTTGGAGAGCACAATGTACTGCCAAACTACTTT 1576
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 GAGAAGCCTGTGAAAGGTGAAGTTATTCTTGGAGAGCACAATGTACTGCCAAACTACTTT 1596
Query 1577 GAACAGAATCAGGCCGAGGTCCTTGATTTGGATAAAACAGTGCTTGAAACAGTTTGTGAA 1636
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1597 GAACAGAATCAGGCTGAGGTCCTTGATTTGGATAAAACAGTGCTTGAAACTGTTTGTGAA 1656
Query 1637 GCTGCAGAAGACTGGAGAAGTGATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAA 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 GCTGCAGAAGACTGGAGAAGTGATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAA 1716
Query 1697 GCAGACATGCTTGATCGAAAGGTCTCTCTTTTAAGCGGTGGTGAGAAAGCGCGTCTTGCT 1756
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1717 GCAGACATGCTTGATCGAAAGGTCTCTCTTTTAAGTGGTGGGGAGAAAGCGCGTCTTGCT 1776
Query 1757 TTCTGCAAATTCATGGTGACGCCATCAACTTTTCTCGTTCTGGACGAACCAACTAATCAC 1816
|||||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||
Sbjct 1777 TTCTGCAAATTCATGGTGACGCCATCTACTTTACTCGTTTTGGACGAACCAACCAATCAC 1836
Query 1817 TTAGACATTCCTTCAAAAGAAATGCTTGAGGAAGCGATAAACGAGTACCAAGGTACAGTC 1876
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1837 TTAGACATTCCTTCAAAAGAAATGCTCGAGGAAGCGATAAACGAGTACCAAGGTACAGTC 1896
Query 1877 ATCGCGGTATCCCACGATCGATACTTTATCAAACAAATCGTTAACAGAGTGATAGAAGTA 1936
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1897 ATTGCGGTATCCCACGATCGATACTTCATCAAACAAATCGTTAACAGAGTGATAGAAGTA 1956
Query 1937 GAGGATGGTTGTTTAGAAGATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTG 1996
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957 GAAGATGGTTGTTTAGAAGATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTG 2016
Query 1997 GATGCTAGGGCAAAAGAGCTGGAGAGAGAAGCAGAGCTAGAAGAGAAAGCTCCAAAAGTG 2056
|||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2017 GATGCTAGAACAAAGGAGCTAGAGAGAGAAGCAGAGCTAGAAGAGAAAGCACCAAAAGTG 2076
Query 2057 AAGGCAAAGTCAAAGATGTCAAAAGCTGAGAAAGAAGCGAGGAAGAAGCAGAAGATGCAA 2116
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2077 AAGGCAAAGTCAAAGATGTCAAAAGCAGAGAAAGAAGCGAGGAAGAAGCAGAAGATGCAA 2136
Query 2117 GCGTTTCAACAAGCTAAACAGAAATCAAAGGCTAGCAAGAACTCCAAGAGATGGAACTGA 2176
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2137 GCATTTCAACAAGCTAAACAGAAGTCAAAGGCTAGCAAGAACTCCAAGAGATGGAACTGA 2196
Query 2177 ACAAACACGGAAAACTGAAAGGAGTCAAGATTTACAAAAAA 2217
||||||| ||||||||||||||||||||||||| ||||||
Sbjct 2197 ACAAACATTGAAAACTGAAAGGAGTCAAGATTTATAAAAAA 2237
Score = 213 bits (115), Expect = 6e-54
Identities = 142/154 (92%), Gaps = 6/154 (4%)
Strand=Plus/Plus
Query 2218 TGTGGAATGTATATAGATA-TACTTTTAGAAATGCAGAGAGAGTATTAATGTTTCTACAA 2276
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2268 TGTGGAATGTATATAGATATTACTTTTAGAAATGCAGAGAGAGTATTAATGTTTCTACAA 2327
Query 2277 CACTTGAGCCCCATTGGGTTAAA-TTAAGAAACTTTATTGTCTCAAAAATGGAT--GAAT 2333
||||||||||||||||||| ||| ||||||||||||||| |||||| ||||| |||
Sbjct 2328 CACTTGAGCCCCATTGGGTAAAAATTAAGAAACTTTATT--CTCAAACATGGAACCGAAC 2385
Query 2334 CGAATCGAACCATTGAATTTCAGTGCAAAACCTA 2367
|||| | |||||||||||||||||||||||||||
Sbjct 2386 CGAACCAAACCATTGAATTTCAGTGCAAAACCTA 2419
> AT5G09930.1 | Symbols: ATGCN2, GCN2 | ABC transporter family
protein | chr5:3097643-3100241 REVERSE LENGTH=2037
Length=2037
Score = 1751 bits (948), Expect = 0.0
Identities = 1552/1841 (84%), Gaps = 51/1841 (3%)
Strand=Plus/Plus
Query 358 CAAA-AACGGAGCTTCTGGGATTTCGTCAGGTGTGAAG-CTAGAGAACATAAGGAAGAGC 415
|||| || || || ||| ||||||||| || ||| || || |||||||| || ||||||
Sbjct 218 CAAACAATGGTGCGTCTTCGATTTCGTCGGGAGTG-AGACTTGAGAACATTAGTAAGAGC 276
Query 416 TACAAAGGCGTGACTGTGCTTAAA-GATGTGACCTGGGAAGTGAA-AAGGGGTGAGAAAG 473
|| ||||| | || |||| |||| |||||||| ||||||||||| || || || ||||
Sbjct 277 TATGAAGGCATTACGGTGC-TAAAGGATGTGACTTGGGAAGTGAAGAA-AGGAGAAAAAG 334
Query 474 TAGGGTTAGTGGGAGTGAACGGAGCTGGGAAGACGACTCAGCTCAGGATTATCACTGGTC 533
|||||||| | || || ||||| || ||||||||||| ||||||||||| || || ||||
Sbjct 335 TAGGGTTAATCGGCGTCAACGGTGCAGGGAAGACGACACAGCTCAGGATCATAACGGGTC 394
Query 534 AAGAAGAGCCTGATTCAGGTAACGTAATCAAGGCCAAACCCAATATGAAAATAGCTTTCT 593
||||||| ||||||||||| ||||| || ||||||||||||| ||||| | |||||||
Sbjct 395 AAGAAGAACCTGATTCAGGAAACGTGATTTGGGCCAAACCCAATTTGAAAGTTGCTTTCT 454
Query 594 TGAGCCAGGAATTTGAGGTTTCGATGAGTAAGACGGTGAGGGAAGAGTTCATGAGTGCTT 653
|||| || || || |||||||| ||| | ||||| |||| ||||||||||||| || | |
Sbjct 455 TGAGTCAAGAGTTCGAGGTTTCAATGGGGAAGACAGTGAAGGAAGAGTTCATGTGTACGT 514
Query 654 TTAAGGAAGAGATGGAGATCA-CTGA-GAAGCTTGAGAAAGTT-CAGAAGGCTATTGAAG 710
|||||||||||||||| || | | || |||||||||| || || |||||||| |||||||
Sbjct 515 TTAAGGAAGAGATGGAAAT-AGC-GAGGAAGCTTGAG-AACTTGCAGAAGGCGATTGAAG 571
Query 711 GATCTGTTGATGATTTGGATCTTATGGGAAGGTTATTAGATGAATTTGATTTGTTGCAGA 770
| ||||||||||||| || || ||||||| |||| |||| ||||| |||||||||||||
Sbjct 572 AAGCTGTTGATGATTTAGAACTAATGGGAAAGTTACTAGACGAATTCGATTTGTTGCAGA 631
Query 771 GACGAGCTC-AG-GCTGTGAATTTGGATTCCGTTGATGCTAAGATTAGTAAGTTGATGCC 828
||||||||| || | | || |||||||||| | ||||||| || |||||| ||||| |
Sbjct 632 GACGAGCTCAAGAGGT-TG-ATTTGGATTCTATCCATGCTAAAATCAGTAAGCTGATGTC 689
Query 829 GGAATTAGGTTTTGCCTCAGAGGATGCTGATAGGCTTGTGGCTTCCTTTAGTGGTGGATG 888
||||||||| |||| || |||||||||||||||||||||||||| ||||| |||||||
Sbjct 690 GGAATTAGGGTTTGTGTCGGAGGATGCTGATAGGCTTGTGGCTTCTTTTAGCAGTGGATG 749
Query 889 GCAAATGAGAATGTCACTTGGAAAGATTTTGCTTCAGGATCCAGATTTGCTGCTTCTT-G 947
||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| || |
Sbjct 750 GCAAATGAGAATGTCACTTGGGAAGATTTTGCTTCAGAATCCAGATTTACTGCTT-TTGG 808
Query 948 ATGAGCCGACCAACCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTATTTGCAG- 1006
||||||| || || |||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 809 ATGAGCCAACGAATCATTTGGATCTTGATACTATTGAGTGGCTTGAAGGTTACTTG-ATT 867
Query 1007 AAGCAAGATGTGCCTATGGTTATTATTTCACATGACAGAGCCTTTCTTGATCAGTTATGT 1066
|||||||||||||||||||| || || ||||||||||| || |||||||||||||| |||
Sbjct 868 AAGCAAGATGTGCCTATGGTCATAATATCACATGACAGGGCGTTTCTTGATCAGTTGTGT 927
Query 1067 ACTAAAATTGTGGAAACTGAGATGGGTGTGTCCAGGACATTT-GAGGGTAATTATTCTCA 1125
||||||||||||||||| || ||||| || || ||||| ||| || |||||||| |||||
Sbjct 928 ACTAAAATTGTGGAAACCGAAATGGGAGTTTCGAGGAC-TTTCGATGGTAATTACTCTCA 986
Query 1126 GTATGTGATCTCAAAGGCAGAGT-GGATCGAAACTCAGAATGCAGCTTGGGAAAAGCAAC 1184
|||||| || ||||||||||||| || | ||| ||||| |||| |||||||| |||||||
Sbjct 987 GTATGTAATTTCAAAGGCAGAGTTGGTT-GAAGCTCAGTATGCTGCTTGGGAGAAGCAAC 1045
Query 1185 AGAAAGAGATCGATTCAACTAAGGACTTGATC-GCTAGGCTTGGTGCTGGTGCCAATTCT 1243
|||||||||| || |||| ||||| ||||| | |||||| ||||||| || ||||||
Sbjct 1046 AGAAAGAGATTGAAGCAACAAAGGATTTGATTAG-TAGGCTAAGTGCTGGAGCAAATTCT 1104
Query 1244 GGTCGTGCTTCTACTGCAGAAAAGAAACTAGAGAAGCTTCAAGAACAGGAGCTAATAGAA 1303
||||| |||||| | |||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct 1105 GGTCGAGCTTCTTCAGCAGAAAAGAAACTGGAGAAGCTTCAGGAAGAGGAGCTAATAGAG 1164
Query 1304 AAGCCATTTCAGCGGAAACAGATGAAGATAAGGTTTCCAGAGCGTGGAACAAGTGGAAGA 1363
|||||||||||||||||||| ||||| || ||||||| || ||||| ||||||||||
Sbjct 1165 AAGCCATTTCAGCGGAAACAAATGAAAATCCGGTTTCCGGAATGTGGATTAAGTGGAAGA 1224
Query 1364 TCGGTAGTCAATGTTAAAAA-CATTG-ATTTTGGTTTCGAGGATAAGATGCTATTTAAGA 1421
|| ||||||| |||||| || | ||| |||| ||||| || ||||||||| ||||||| |
Sbjct 1225 TCTGTAGTCACTGTTAAGAATC-TTGTATTT-GGTTTTGATGATAAGATGTTATTTAACA 1282
Query 1422 AGGCTAATCTATCAATAGAAAGAGGGGAGAAAATCGCCATTATTGGCCCGAACGGTTGCG 1481
|||| |||||| | ||||||||||| |||||| |||| || ||||| || ||||| ||||
Sbjct 1283 AGGCGAATCTAGCTATAGAAAGAGGAGAGAAAGTCGCTATAATTGGTCCAAACGGGTGCG 1342
Query 1482 GAAAGAGTACGTTATTGAAG-TTAATTATGGGTTTAGAAAAGCCTATGAAAGGTGAAGTT 1540
|||||||||| || |||| ||| |||||||||| || |||||||||| |||||| ||
Sbjct 1343 GAAAGAGTACATTGCTGAAACTTA-TTATGGGTTTGGAGAAGCCTATGAGAGGTGAGGTG 1401
Query 1541 ATTCTTGGAGAGCACAATGTACTGCCAAACTACTTTGAACAGAATCAGGCCGAGG-TCCT 1599
|| ||||| |||||||||||| ||||||||||||| || ||||||||||| |||| ||
Sbjct 1402 ATACTTGGGGAGCACAATGTATTGCCAAACTACTTCGAGCAGAATCAGGCAGAGGCTCAA 1461
Query 1600 TGATTTGGATAAAACAGTGCTTGAAACAGTTTGT-GAAGCTGCAGAAGACTGGAGAAGTG 1658
|||||||||||||| ||| |||| |||||| || |||||||| | ||| ||||||| ||
Sbjct 1462 -GATTTGGATAAAACGGTGATTGAGACAGTT-GTTGAAGCTGCTGTAGATTGGAGAATTG 1519
Query 1659 ATGATATAAAAGGTCTTCTTGGACGCTGCAACTTCAAAGCAGACATGCTTG-ATCGAAAG 1717
|||||||||||| ||||||||| || |||||||||||||| |||||| ||| || |||||
Sbjct 1520 ATGATATAAAAGCTCTTCTTGGTCGGTGCAACTTCAAAGCTGACATG-TTGGATAGAAAG 1578
Query 1718 GTCTCTCTTTTAAGCGGTGGTGAGAAAGCGCGTCTTGCTTTCTGCAAATTCATGGTGACG 1777
||||||||||| || ||||||||||| || || |||||||||||||||||||||||||
Sbjct 1579 GTCTCTCTTTTGAGTGGTGGTGAGAAGGCACGCCTTGCTTTCTGCAAATTCATGGTGAAA 1638
Query 1778 CCATCAACTTTTCTCGT-TCTGGACGAACCAACTAATCACTTAGACATTCCTTCAAAAGA 1836
||||| ||| | || || | |||||||||| || |||||||||||||| |||||||||||
Sbjct 1639 CCATCCACTCTACTTGTGT-TGGACGAACCCACCAATCACTTAGACATACCTTCAAAAGA 1697
Query 1837 AATGCTTGAGGAAGCGATAAACGAGTACCAAGGTACAGTCATCGCGGTATCCCACGATCG 1896
||||||||||||||| ||||| |||||| |||| || |||||| | || || |||||| |
Sbjct 1698 AATGCTTGAGGAAGCTATAAATGAGTACAAAGGCACGGTCATCACAGTCTCACACGATAG 1757
Query 1897 ATACTTTATCAAACAAATCGTTAACAGAGTGATAGAAGT-AGAGGATGGTTGTTTAGAAG 1955
|||||| || ||||| || ||||||||||| || ||||| |||| ||||| ||||| | |
Sbjct 1758 ATACTTCATTAAACAGATTGTTAACAGAGTTATTGAAGTCAGAG-ATGGTGGTTTA-ATG 1815
Query 1956 -ATTATGCAGGCGACTACAATTATTACTTGGAGAAGAATCTGGATGCTAGGGCAAAAGAG 2014
| |||||||| ||||||||||||| | ||||||||||| | || ||||| |||| |||
Sbjct 1816 GACTATGCAGGAGACTACAATTATTTCCTGGAGAAGAATGTTGAAGCTAGAGCAAGGGAG 1875
Query 2015 CTGGAGAGAGAAGCAGAGCTAGAAGAGAAAGCTCCAAAAGTGAAGGCAAAGTCAAAGATG 2074
|||||||| |||||||| | ||||| ||||||||||||||||| |||||||||||||||
Sbjct 1876 CTGGAGAGGGAAGCAGAATTGGAAGAAAAAGCTCCAAAAGTGAAAGCAAAGTCAAAGATG 1935
Query 2075 TCAAAAGCTGAGAAAGAAGCGA-GGAAGAAGCAGAAGATGCAAGCGTTTCAA-CAAGCTA 2132
||||| ||||||| |||||| | |||||||||| |||||| ||||||||||| | | |
Sbjct 1936 TCAAAGGCTGAGAGAGAAGC-ACGGAAGAAGCAAAAGATGAAAGCGTTTCAAGCTTCCAA 1994
Query 2133 AACAGAAATCAAAGGCTAGCAAGAACT-CCAAGAGATGGAA 2172
|| |||| |||||| | ||||| || | |||||||||||||
Sbjct 1995 AA-AGAAGTCAAAGTCCAGCAAAAA-TGCCAAGAGATGGAA 2033
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117519475845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5