BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496863 Length=1143 Score E Sequences producing significant alignments: (Bits) Value AT5G67370.1 | Symbols: | Protein of unknown function (DUF1230)... 1714 0.0 > AT5G67370.1 | Symbols: | Protein of unknown function (DUF1230) | chr5:26877553-26879542 REVERSE LENGTH=1175 Length=1175 Score = 1714 bits (928), Expect = 0.0 Identities = 1064/1130 (94%), Gaps = 8/1130 (1%) Strand=Plus/Plus Query 1 GTGTATCAGGTGCTCTGCTCCACTGACCTTTAATCTTTATTCAACAATACTCTCAGGAAC 60 |||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||| Sbjct 1 GTGTATCAGGTGCTCTGCTCCACTTACCTTTAATCTTCAATCAACGGTACTCTCAGGAAC 60 Query 61 AGGAATCAGATCGAGCAATGCTCAGGTTAATCGTTAGTTACCCTCTGATTCCCAAGAAAC 120 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 61 AGGAATCAGATCGAGCAATGCTCAGGTTAATCGTTAATTACCCTCTGATTCCCAAGATAT 120 Query 121 CCCACCGGGTTTGTAGTAAC---AGTAGTAAGCTCGGGAGTTACTATGATTCTTCGTCGA 177 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 121 CCCACCGGGTTTGTAGTAACAGTAGTAGTAAGCTCGGGAGTTACTATGATTCTTCGTCGA 180 Query 178 TCATCAAATATGGCGGAATCGGCGATGATGTTGGTAAGAAGCAGGAGCTTCTTCTTAA-T 236 |||| ||||||||||||||| |||||| |||||||||||||||||||||| ||| ||| | Sbjct 181 TCATAAAATATGGCGGAATCAGCGATGTTGTTGGTAAGAAGCAGGAGCTTTTTC-TAAGT 239 Query 237 GTTTCGGTGAAAGCTGTGGAAGACAAAGGTAATAATGGAGGTGGAAGCATGAGTTTCCCT 296 |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct 240 GTTTCGGTGAAAGCAGTGGAAGACAAAGGTAACAATGGAGGTGGAAGCATGAGTTTCTCG 299 Query 297 GGTCAAAGCTGGGATCCAAGTTCAGAGATTGAAGTTCCTTCAGACCAAAGACCCGTGAAT 356 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 300 GGTCAAAGCTGGGATCCTAGTTCCGAGATTGAAGTTCCTTCAGACCAAAGACCCGTGAAT 359 Query 357 GAGTATTCGTCTTTGAAGGAAGGAATGTTGTATTCATGGGGAGAATTGGGTCCAAGCGAG 416 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 GAGTATTCGTCTCTAAAGGAAGGAATGTTGTATTCATGGGGAGAATTGGGTCCAAGCGAA 419 Query 417 TTCTTTATCCGTCTCGGTGGTCTTTGGTTGGTTACTTTCACTGTTCTTGGTGTTCCTATT 476 |||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||| || Sbjct 420 TTCTTTATTCGTCTAGGTGGTCTTTGGTTGGTCACTTTCACTGTTCTTGGAGTTCCTGTT 479 Query 477 GCAGCTGCTAGCTTTAATCCTTCCAGAGAGCCTTTGAGATTTGTTCTAGCTGCAGGGACA 536 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 480 GCAGCTGCTAGCTTTAATCCTTCCAGAGAGCCTTTGAGATTTATTCTAGCTGCAGGGACT 539 Query 537 GGAACGTTATTCCTGGTTTCATTGATTGTCTTGAGGATTTACCTGGGATGGAGCTATGTT 596 ||||| ||||| || ||||| |||||||||||||| ||||| ||||| |||||||||||| Sbjct 540 GGAACTTTATTTCTCGTTTCTTTGATTGTCTTGAGAATTTATCTGGGGTGGAGCTATGTT 599 Query 597 GGAGATAGACTACTTTCTGCAGTTATACCATATGAAGAGAGTGGATGGTATGATGGACAA 656 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 600 GGAGATAGACTACTTTCTGCAGTTATACCTTACGAAGAGAGTGGATGGTATGATGGACAA 659 Query 657 ATGTGGGTGAAACCACCAGAGGTGTTGGCTCGCGACAGGTTGTTAGGTTCTTACAAGGTG 716 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 660 ATGTGGGTCAAACCACCTGAGGTGTTGGCTCGCGACAGGTTGTTGGGTTCTTACAAGGTG 719 Query 717 AAGCCAGTGATCAAGATGCTCAAACAAACATTAATCGGAACAGGAGCTTTACTCGTTTCA 776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 AAGCCAGTGATCAAGATGCTCAAACAAACATTAATCGGAACAGGAGCTTTACTCGTTTCA 779 Query 777 GCATTTGTGCTATTCGTTTTCGCAACACCAGTTGAGGATTTCTTTAAAACCACTCTAAGA 836 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 780 GCATTCGTGCTATTCGTTTTCGCAACACCAGTCGAGGATTTCTTTAAAACCACTCTAGGA 839 Query 837 TCTAAAGAACACCAACCCGAAGTTTCCATTTCAAGAACCAGCAACAAGTTCAATATAAGA 896 |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 840 TCTACAGAAAACCAACCAGAAGTTTCCATTTCAAGAACCAGCAACAAGTTCAATATAAGA 899 Query 897 AAAGAACAACTGCTTCGGTTACCTGTAGATGTTGTGACTGACGATGATCTGGCAGCAGCC 956 ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 900 AAAGAACAATTGCTTCGACTACCCGTAGATGTTGTGACTGACGATGATCTGGCAGCAGCC 959 Query 957 GCAGCTGAGGCTGCTGATGGAAGACCTGTCTATTGCAGAGACCGTTACTACCGTGCATTA 1016 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 960 GCGGCTGAGGCTGCGGATGGAAGACCTGTCTATTGCAGAGACCGGTACTACCGTGCATTA 1019 Query 1017 GCAGGTGGTCAATACTGCAAATGGGAAGATCTTGTCAAATAGTTGTCACTA-TAATAGAA 1075 ||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 1020 GCAGGTGGTCAATACTGCAAATGGGAAGATCTTGTTAAATAGTTGTCAC-ACTAATAGAA 1078 Query 1076 TACCAAGACCACACACTACAATATGTAATTTTTGATTAAAATGGCTTTAA 1125 |||||| || ||| |||||| ||||||||||||| ||||||||||||||| Sbjct 1079 TACCAACAC-ACATACTACAGTATGTAATTTTTGCTTAAAATGGCTTTAA 1127 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56074008765 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5